Achromobacter sp. JD417: LN047_25085
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Entry
LN047_25085 CDS
T11120
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
achj Achromobacter sp. JD417
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
OMP_b-brl
DUF4100
Motif
Other DBs
NCBI-ProteinID:
XGB27071
LinkDB
All DBs
Position
complement(5469054..5471591)
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AA seq
845 aa
AA seq
DB search
MSRRFPLTRLAALLSLSLPFSAPSALAQPTDYILHAGSVPTVVNVGDYTSISLVGGTIVD
GDVVNDGLMWPMRFSPNGGIKVQGSTVNGSIINQAARQLTSNRAGISISAGAMVKGDIIN
EYRISGEYSSGVGIEVITSGTVLGKIINNGSIDAGIVVSDGTVTGGILNNGVINPKMDGI
ALDVAGASSPMTIVNAGTIAGDVMLGTSTLDITGGTITGGVVGPDAIMNINGDFGATSKI
SVGQINVAPAATLTLNGNTMKGLVNVKGTLAGSGEVGPTTMESGSTLSPNAAAQSNHIFM
MSMSPVVVTPPSPIGTITVNGDLTFKPGSTYRVDATAEGKSDRVKVTGTANLAGSVVHVG
SGGTYAESTAYTILSANTLNGHFDSATSDMAFLQPSLSHQGNQVVLTLDKKQVPTDPDPK
PTEPTPTPTEPTPTPTEPAPTPTEPAPTPTQPAPTPIGNGGTRPIEFADLAVTGNQRAAA
NALQSLPTTSALYTRVLNLPNGAPAGVFADLSGESFGSSVSAMQNVSNNVASLPTAQLRA
NMNAGFVAGPPTAQVGRGDASMLPRSNAQPLWAQAFGNWRTMDGNGDVAKSRERDVGIFV
GGDHGVGNGWRLGGAFGYTDSRITVDDRSAKSDVNSYSAILYGGKSFEAGSGKINFTAGL
AYTWHDIDSKRNINAAGQYQELKADYSASTGQVFTDVGYAIPLNDRVTLEPFFGADFSDL
RTRGFSESGGDAALSGKRSTNNVGTTTLGLRAQTTFDVKDNAGRLRGMLGWRHAYGDLNP
EATMSFDGSQPFTVAGNPLARDAAVMEVGVDLAMSKNATLGLAYSGQFGDGNRQNTGTVN
VSWRF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgctttccgcttactcgcctcgccgctttgcttagcctgagcctgccgttt
tccgccccgtcggcgcttgcacagcccaccgactacatcctccacgcgggtagtgtgccc
accgttgtcaacgttggggattacacctcgatcagcctggtcggcggcacgatcgtggac
ggcgacgtcgtgaacgatggcttgatgtggccgatgcgcttcagccccaatggcggcatc
aaggtgcagggatcgaccgtcaatggctcgatcatcaaccaggccgcccggcaactgacc
agcaatcgcgccggtatcagcatctcggctggcgccatggtcaagggcgacatcatcaac
gaatatcggatttcgggcgagtacagttcgggcgtcggtatcgaagtgatcacctcgggc
acggtcctgggcaagatcatcaacaacggaagcatcgacgcgggcatcgttgtctcggac
ggcacggtcaccggcggcatcctcaacaacggcgtcatcaatcccaagatggatggcatt
gcccttgacgtcgccggcgccagttcgccgatgacgatcgtcaacgccggcacgatcgcc
ggtgacgtgatgcttggcacgtccaccctggacatcaccggcggcaccattacgggtggc
gtcgtgggccccgacgccatcatgaacatcaatggcgacttcggggcaacctccaagatc
agcgtcggccagatcaacgtcgcgccggccgcgacgctgacgctgaacggcaacaccatg
aagggcctggtgaacgtgaagggcacgctggcgggttccggcgaagtcggcccgacgacg
atggagtcgggttcgaccctgtcgcccaacgccgcggcgcagtcgaaccacatcttcatg
atgtcgatgtcgccggttgtcgtcaccccgccgtcgccgatcggcaccatcacggtgaat
ggcgacctgaccttcaagccgggctcgacctatcgcgtcgacgccaccgccgagggcaag
agcgaccgcgtcaaggtcaccggcacggccaatctggcgggctccgtggtgcacgtgggt
tcgggcggcacgtatgccgaatcgacggcctacaccatcctgtcggccaacaccctgaac
ggccacttcgacagcgcgaccagcgacatggccttcctgcaaccgtcgctcagccatcaa
ggcaaccaggtcgtgctgacgctcgacaagaagcaagtgccgaccgacccggatcccaag
ccgaccgagccgactcccacgccgaccgagccgactcccacgccgacggaaccggccccc
acgccgaccgagccggcgcccacgccgacccaaccggcccccacgcccatcggcaacggc
ggcacccgcccgatcgaattcgccgacctggccgtgaccggcaaccagcgtgcggccgcg
aacgcgttgcaaagcctgcccacgaccagcgcgctgtacacgcgggtcctgaacctgccc
aacggcgccccggccggcgtgtttgccgacctgtccggcgaatcgttcggcagcagcgtg
tcggcgatgcagaacgtcagcaacaacgtcgccagcctgcctacggcacagctgcgcgcc
aacatgaatgccggtttcgtggccggcccccccacggcgcaggtcggccgtggcgatgcc
tccatgctgccgcgctcgaacgcgcagccgctgtgggcgcaggccttcggcaactggcgc
acgatggacggcaacggcgacgtcgccaagtcccgtgaacgcgatgtcggcatctttgtc
ggtggcgatcatggcgtgggcaacggctggcgtctgggtggcgcgttcggttacaccgat
agccgcatcacggtggacgaccgctcggccaagtccgacgtgaacagctacagcgcgatc
ctgtacggcggcaagtcgttcgaagccggctcgggcaagatcaatttcaccgccggcctg
gcctacacgtggcacgacatcgacagcaagcgcaatatcaacgcggcgggccagtaccag
gagctgaaggccgactacagcgccagcacgggccaggtcttcaccgacgtgggctacgcc
atcccgctgaacgaccgcgtcacgcttgagccgttctttggcgcggacttcagcgacctg
cgcacccgcggcttctcggagtcgggcggcgacgccgcgctgagcggcaagcgcagcacg
aacaacgtgggcaccaccacgctgggcctgcgcgcacagacgacgttcgacgtgaaggac
aacgcgggccgcctgcgcggcatgctgggctggcgccatgcttacggtgacctcaacccg
gaagccacgatgtcgttcgacggcagccagccgttcaccgtcgcgggcaacccgctggcg
cgtgacgcggcggtcatggaagtgggcgtggatctggcgatgagcaagaacgccacgctg
ggtctggcgtactcgggccagttcggcgacggcaaccgccagaacaccggcacggtcaac
gtgagctggcgcttctaa
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