Achromobacter sp. JD417: LN047_25215
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Entry
LN047_25215 CDS
T11120
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achj03000
]
LN047_25215
Transcription factors [BR:
achj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LN047_25215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
I-HmuI_NUMOD-like
PBP_like_2
Cro
HTH_28
MarR
Small_EgtBD
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XGB27096
LinkDB
All DBs
Position
5501053..5501961
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AA seq
302 aa
AA seq
DB search
MKDHQLRAWLKVAELRSIRAAARSLHLSQAAVTKAIKELETELDAPLLTRSPKGIAVTEC
GEHLTVRARLAQAQLALARQDIRQLLSGAQARVAVGVTPMVMMSVLPDVLAEFRASMPAA
KVKVSEGLLPAVLPALRNGALDFALASRMNDGAGGQEFDFEELRPLEFMIACRKGHPLAR
ARRWDDIRGCEWLLNVSPGSHTEAFLRGLRAHRLPEPQRVIECDTFGVMWNLMTRSDALI
LCPSGMLDIKPYGDEARRIRADVPMPVASIGIMTLQGTPLSLAAATMADLFRRHVSRAPL
GG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaccatcaattgcgcgcgtggctgaaagtggccgaactgcgcagcatccgcgcc
gccgcgcgcagcctgcacctgagccaggccgccgtgaccaaggccatcaaggaactcgaa
accgaactggacgcgccgctcctgacgcgcagccccaagggcatcgccgtcacggaatgt
ggcgagcacctcacggttcgggctcgcctggcgcaggcgcaactcgcgctggcccgccag
gacatccgccagctgctcagcggcgcgcaggcgcgcgtggcggtgggcgtcacacccatg
gtgatgatgagcgtgctgcccgacgtgctggccgagttccgcgccagcatgccggccgcc
aaggtcaaagtttccgagggattgctccccgcggtgctgcccgcgctgcgaaacggcgcg
ctggatttcgcgctggcctcgcgcatgaacgacggcgccggcgggcaggaattcgacttc
gaggaactgcggccgctggaattcatgatcgcgtgccgcaagggccatccgctggcgcgc
gcacggcggtgggacgacatccgcggctgcgaatggctgctcaacgtatcgcccggcagc
cacaccgaagcctttctgcgagggctgcgcgcgcaccgtctgcccgaaccccagcgggtc
atcgagtgcgacaccttcggtgtcatgtggaacctgatgacccgcagcgacgcgctcatc
ctctgcccgtccggcatgctggacatcaagccctacggcgacgaggcccggcgcatccgc
gccgacgtgcccatgccggtggccagcatcggcatcatgacgctgcagggcacgccgctg
tcgctggcggcggccaccatggcggacctgttccggcgtcacgtgtcgcgcgcgccgctg
ggcggataa
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