Achromobacter sp. JD417: LN047_26780
Help
Entry
LN047_26780 CDS
T11120
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
achj Achromobacter sp. JD417
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achj03009
]
LN047_26780 (rimO)
Enzymes [BR:
achj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LN047_26780 (rimO)
Ribosome biogenesis [BR:
achj03009
]
Prokaryotic type
ribosomal protein modification factors
LN047_26780 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF5005
RNase_II_C_S1
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
XGB30643
LinkDB
All DBs
Position
5846874..5848220
Genome browser
AA seq
448 aa
AA seq
DB search
MTAAAQEANPGRAPRVGFVSLGCPKALVDSERILTQLRTEGYEITPEYNGADVVVVNTCG
FIDSAKAESLEAIGEALAENGKVIVTGCMGVEESVIRDVHPSVLSVTGPQQYEEVVRAVH
GVAPPRTDHNPYVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGD
VLNEAERLVKAGVKELLVISQDTSAYGVDLKYRSGFWNGRPVKTRMTELCMALSEMGVWT
RLHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPRILKLMKRPAFEDKTLARIKRWRE
ICPDLTIRSTFIVGFPGETEEDFQYLLDWMQEAQLDRVGCFQYSPVEGAPANELADPVPD
DVKQGRWERFMALQQTISAQRLALKVGREIDVLIDEVDEDGAVGRSAGDAPEIDGCVYVS
SDKPLQPGDMVRVRVTESDEYDLWADAL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atcacggccgccgcccaagaggccaacccgggacgcgcgccgcgcgtggggttcgtgtcg
ctgggctgccccaaagccctggtcgactccgaacgcatcctgacccagctgcgcaccgaa
ggctacgaaatcacgccggaatacaacggtgccgacgtggtcgtcgtgaacacctgtggt
ttcatcgacagcgccaaggccgagtcgctggaagccatcggcgaagccctggccgagaac
ggcaaggttatcgtgaccggctgtatgggcgtcgaggaatcggtgatccgcgacgtgcat
cccagcgtgctgtcggtgaccggtccccagcaatatgaagaggtcgtgcgcgccgtgcac
ggcgtggcgcccccgcgcacggaccacaatccctacgtggacctggttccgccgcagggc
gtgaagctcacgccgcgccactatgcgtacctgaagatctccgaaggctgcaatcatcgc
tgcagcttctgcatcattccctcgatgcgcggcgacctggtcagccgtcccgtcggcgac
gtgctgaacgaagccgagcgtctggtgaaggccggcgtcaaagagctgctcgtgatctcg
caggacaccagcgcctacggcgtggacctgaaataccgcagcggtttctggaacggccgc
ccggtcaagacccgcatgaccgagctctgtatggccttgtccgaaatgggcgtctggacg
cgcctgcattacgtgtacccgtacccgcacgtcgatgaagtgattccgctgatggccgag
ggcaagatcctgccctacctggacatcccgttccagcacgccagtccgcgcatcctgaag
ctgatgaagcgccccgccttcgaagacaagacgcttgcgcgcatcaagcgctggcgcgaa
atctgcccggacctgacgatccgctcgaccttcatcgtcggatttcccggcgaaaccgag
gaagacttccaatatctgctggactggatgcaggaagcgcaactggaccgcgtgggctgt
ttccagtattcgccggttgaaggcgcgccggccaacgagctggccgatccggtgccggac
gacgtcaagcagggtcgctgggagcgcttcatggcgctgcagcagaccatctccgcccag
cgcctggcgctgaaggtcggccgcgagatcgacgtgctgatcgacgaggtcgatgaagac
ggcgcggtgggccgcagcgcgggcgacgcgccggaaatcgacggctgcgtctacgtcagt
tcggacaagcccctgcagccgggcgacatggtgcgcgtgcgcgtcaccgagtccgacgag
tacgacctctgggccgacgcgctgtaa
DBGET
integrated database retrieval system
