Achromobacter sp. JD417: LN047_27075
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Entry
LN047_27075 CDS
T11120
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00550
Peptidoglycan biosynthesis
achj01100
Metabolic pathways
achj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LN047_27075 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN047_27075 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
achj01011
]
LN047_27075 (mrdA)
Enzymes [BR:
achj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LN047_27075 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
achj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LN047_27075 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
XGB27446
LinkDB
All DBs
Position
complement(5906945..5908873)
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AA seq
642 aa
AA seq
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MFEFKKTGQQQKQRFRLRAWVGGAFALVCFGVLVGRFWYLQVDRYEGLSERADRNRIAVV
PIPPRRGEILDRNGEVLARNYRTYTLEVVPAHAGNMNELFERLTEVVYISPSDQRRFKRR
AAESSRYASLQLRNNLNETEAAWFAAHAFQFPGVELRARWVREYPQGVSAAHVVGYIGRI
ADNDIEELDRAGQLGNYRGTEVIGKKGIEKTWEEQLHGRTGLEEVEVTAGGRPMRTLRRI
DPVPGSDIMLSIDMGLQKVAEEAFEGQRGALVAIDPDTGEVLAFVSQPSFDPNLFVDGID
VDNWRMLNESPDHPLINRPLYGTYPIGSTYKPFVGLAALELGKRRATDRISDPGYYEFGG
QKFRNAGGAAYGMTDMHKAIVVSSDTYFYSLGPEIGVNALHDFTKQFGFGQITGIDLEGE
KRGVLPSTDWKRAAYKDKERQRWYAGETISVAVGQGYNAFTLLQLAQGTSTLANNGLYRR
PHLVHAVRDPRSGVAKPTESPPDYRIPLKQANVDVIKNAMADVVRAGTARRAFANTPYQA
AGKTGTAQVFSLRGGHYRASAIDERLRDHALFMGFAPLEHPRIAVALIVENAGWGASVAA
PVARKVFDYWLAKDRQDKIVRPERADTMATVDDIASDLVRQQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaattcaagaaaaccggccagcagcagaagcagcgcttccgcctgcgcgcgtgg
gtgggcggcgccttcgcgctggtgtgttttggcgtgctggtgggccggttctggtacctg
caggtcgaccgctacgaaggcctgtccgaacgcgccgaccgcaaccgcatcgcggtcgtg
ccgatccccccgcgccgcggcgagatcctggaccgcaacggcgaagtcctggcccgcaac
taccgcacctacaccctcgaagtcgtgccggcccacgcgggcaacatgaacgaactcttc
gagcgcctgacggaagtcgtctacatcagcccgtccgaccagcgccgcttcaagcgccgc
gccgccgagtccagccgctacgccagcctgcagcttcgcaacaacctgaacgagaccgag
gccgcgtggtttgccgcgcacgcgtttcagtttccgggcgtggaactgcgcgcccgctgg
gtgcgcgagtacccgcagggcgtgtcggccgcgcacgtggtgggctacatcggccgcatc
gccgacaacgacatcgaggaactggaccgcgccggacaactgggcaactatcgcggcacc
gaggtcatcggcaagaagggcatcgaaaagacctgggaagagcaactgcacggccgcacc
ggtcttgaagaagtcgaggtgacggcgggcggtcggcccatgcgcacgttgcgccgcatc
gatccggtgcctggctcggacatcatgctgtccatcgacatgggactgcagaaggtggcc
gaagaggcgttcgaaggccagcgcggcgcgctcgtcgccatcgatccggacacgggcgaa
gtgctggctttcgtgtcgcagccatcattcgatccgaacctctttgtggacggcatcgat
gtcgacaattggcgcatgctgaacgaatcgccggaccatcccctgatcaatcgtccgctg
tacggcacctatcccatcggctccacctataagcccttcgtcggcctggccgcgctggaa
ctgggcaagcgccgcgcgaccgaccgtatctcggacccgggctactacgaattcggcgga
cagaagttccgcaacgccggcggtgcggcctacggcatgacggacatgcacaaggccatc
gtcgtgtcctccgacacctatttctattcgcttggccccgaaatcggcgtgaacgccctg
cacgatttcaccaaacagttcgggtttggccagatcacgggcatcgacctggaaggcgaa
aagcgcggcgtgctgccatccaccgattggaagcgcgcggcctacaaggacaaggaacgc
cagcgctggtacgcgggcgagaccatttccgtcgcggtgggccagggctacaacgcgttc
acgctgcttcaactggcgcagggcacttccacgctggccaacaacgggctataccgccgt
ccgcacctggtgcacgcggtgcgcgatccgcgctcgggtgtggccaagccgaccgagtcg
ccgcccgactatcgcattccgctcaagcaggccaatgtggacgtcatcaaaaatgccatg
gccgacgtggtgcgggccggcacggcgcggcgcgcgttcgccaacacgccctaccaggcc
gccggcaagaccggcaccgcgcaggtgttcagcctgcgcggcggccactaccgcgccagc
gccatcgacgagcgtctgcgcgaccacgcgctgttcatgggcttcgcgccgcttgagcac
ccgcgcatcgccgtggcgctgatcgtcgagaacgccggttggggcgccagcgtggcggcc
cccgtcgcgcgcaaggtcttcgactactggctggccaaggaccgccaggacaagatcgtt
cgtcccgagcgcgcggacaccatggcgaccgtcgacgacatcgcctccgacctggtgcgc
caacaatga
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