Achromobacter sp. JD417: LN047_27275
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Entry
LN047_27275 CDS
T11120
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
achj Achromobacter sp. JD417
Pathway
achj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LN047_27275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achj03400
]
LN047_27275
Enzymes [BR:
achj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LN047_27275
DNA repair and recombination proteins [BR:
achj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LN047_27275
Prokaryotic type
LN047_27275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XGB27485
LinkDB
All DBs
Position
5946907..5947671
Genome browser
AA seq
254 aa
AA seq
DB search
MPTDNRLTPNALATQAGQLPAAWQAALSADPAVAAALAAATSHVEARLAQGAVVYPATPF
RALQGLAPSDVRVVILGQDPYHGPGQAQGLAFSVPDDCKRPPSLRNIFNEIARDYPDLGV
PAGNDLTAWAEQGVLLLNTALTVEDGQPASHAKRGWETVTDALIKLVARDPSPKVFMLWG
AHAQAKRLLLPPDSGHLVLMSNHPSPLSARRPPVPFLGCGHFRATNAWLENQGKNPIDWG
LDKKIIPLQGEFRL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgacaaccgccttacgcccaacgccctggccacgcaggccgggcaactgccc
gccgcctggcaggccgccctgtccgccgaccccgccgtggccgcagcccttgccgccgcg
accagccatgtggaagcgcgcctggcgcagggcgccgtggtgtatcccgccacgcccttt
cgcgccttgcaaggcctggcgccctcggacgtacgggtcgtgatcctgggccaggacccc
taccacggccccggccaggcgcaggggctggcgttctcggtgccggacgactgcaagcgc
ccccccagcctgcgcaacatcttcaacgagattgcgcgcgactatccggacctgggcgtt
ccggcgggcaatgacctcaccgcctgggccgagcagggcgtgctgctgctgaacacggcg
ctcaccgtggaagacggccagcccgcgtcgcacgccaaacgcggctgggaaacggtgacc
gatgccctcatcaagctcgtcgcgcgcgatccgtcgcccaaggtgttcatgctgtggggc
gcccacgcccaggccaagcggctgttgctgccgcccgacagcggccatctggtgctgatg
tccaatcacccttccccgctgtccgcccggcgccccccggtgccgttcctgggctgcggt
catttccgggccaccaacgcgtggctggaaaaccaagggaaaaaccctattgattggggg
ctggacaaaaaaataattcccttgcagggtgaattcaggttatga
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