Achromobacter sp. JD417: LN047_27280
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Entry
LN047_27280 CDS
T11120
Name
(GenBank) DEAD/DEAH box helicase
Organism
achj Achromobacter sp. JD417
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XGB27486
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Position
5947948..5949744
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AA seq
598 aa
AA seq
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MSFETLGLAPALLSAVQEAGFTTPTTVQAAAIPQALAGHDLMVSSQTGSGKTAAFMLPAL
HRIAQMPANKGVGVQVLVLTPTRELALQVTDATATYGRKLADLRTATVVGGMPYGAQLKA
LSRRVDVLVATPGRLIDHLQSGRVKLNTVHTLVLDEADRMLDMGFIEDIETIIERLPQER
QTLLFSATLDGTVAKLAARMMREPQRIEIAGAKEKHTNITQSLLYADDASHKMQLLDHVL
RDASLDQAIVFTSTKRGADDLADRLADQGFAAAALHGDMNQRQRTRTLSQLQRGQLRILV
ATDVAARGIDVQGISHAVNFDLPMQAEDYVHRIGRTGRAGRSGLAFTLATHSERHKVRRI
EHYIGQSITPEVIAGLEPKRTPRPSTGGGGGKPFGKPFGKRPGGFGGSRHASGGFAGNRD
GGRDGAPREGRSFGGPRGEFKPRDGGYQGNRSFEDRPFGDRPQRSFGDRPSFGDRPQREG
GYQGNRPFGDRPQREGGFRGGDRDSRPSFGDRPSYGDRPQRDARPFSERGPREGGFRGGD
RDARPSFGDRPSFGDRPQREGGFRGGDRPEVGFRGKPSFDKRPGGPAKRFTKSTDRRG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaaaccctgggtctcgcgcccgccctgttgtcggccgttcaagaagctggc
ttcaccacccccaccaccgttcaagccgccgccattccgcaagcgctggccggccatgac
ctgatggtgtcctcgcagaccggcagcggcaagaccgcggccttcatgctgcccgccctg
caccgcattgcccagatgcccgccaacaagggcgtcggcgtgcaagtgctggtgctgacc
ccgacccgcgaactggccctgcaagtcacggacgccaccgccacctacggccgcaagctg
gccgacctgcgcaccgcgaccgtcgtgggcggcatgccctacggcgcgcaactgaaggcg
ctgtcgcgccgcgtcgacgtgctggtcgccacccccggccgcctgatcgatcacctgcaa
tcgggccgcgtcaagctcaacaccgtgcacaccctggtgctggacgaagccgaccgcatg
ctggacatgggcttcatcgaagatatcgagaccatcatcgagcgcctgccgcaagagcgc
cagacgctgctgttctcggccaccctggacggcaccgttgccaagctggccgcgcgcatg
atgcgcgagccgcagcgcatcgagatcgccggcgccaaggaaaagcacaccaacatcacg
caaagcctgctgtacgcggacgacgccagccacaagatgcagctgctggaccacgtgctg
cgcgacgcctcgctggatcaggccatcgtcttcacgtcgaccaagcgcggcgcggacgac
ctggccgaccgcctggccgaccagggctttgccgccgccgccctgcacggcgacatgaac
cagcgccagcgcacccgcacgctgtcgcaactgcaacgcggccagttgcgcatcctggtg
gccaccgacgtggccgcccgcggcatcgacgtgcaaggcatcagccacgccgtcaacttc
gacctgccgatgcaggctgaagactacgtgcaccgcatcggccgtacgggccgcgccggc
cgcagcggcctggcgttcacgctggccacgcattccgagcgccacaaggtccgccgcatc
gagcactacattggccagtcgatcacgcctgaagtgatcgccggtctggaacccaagcgc
accccgcgtccgtccaccggtggcggcggcggcaagccctttggcaagcctttcggcaag
cgtcccggcggcttcggcggttcgcgccatgcgtcgggcggctttgccggcaaccgcgac
ggcggccgcgatggcgccccgcgtgaaggccgttccttcggcggcccgcgtggcgaattc
aagccgcgcgacggcggctaccagggcaaccgctcctttgaagaccgtccgttcggcgac
cgcccgcagcgttcgtttggcgaccgtcccagcttcggcgatcgtccgcagcgcgaaggc
ggctaccagggcaatcgccccttcggcgaccgtccccagcgtgaaggcggcttccgtggc
ggcgaccgcgattcgcgtcccagctttggcgaccgccccagctacggcgaccgtccccag
cgcgacgcccgtccgttcagcgagcgcggcccccgtgaaggcggtttccgcggtggcgat
cgcgacgcgcgtcccagctttggcgaccgtcccagcttcggcgaccgtccccagcgcgaa
ggcggcttccgtggcggcgatcgtcccgaagtcggcttccgtggcaagccctcgttcgac
aagcgccccggcggtcccgccaagcgtttcaccaagtcgaccgatcgccgcggctaa
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