Acanthisitta chloris (rifleman): 103797373
Help
Entry
103797373 CDS
T08456
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achl03041
]
103797373 (DDX1)
03016 Transfer RNA biogenesis [BR:
achl03016
]
103797373 (DDX1)
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103797373 (DDX1)
Spliceosome [BR:
achl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103797373 (DDX1)
Transfer RNA biogenesis [BR:
achl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103797373 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
103797373
NCBI-ProteinID:
XP_009067837
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQAQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKINLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTIAQIEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2207 nt
NT seq
+upstream
nt +downstream
nt
aaatgggtgttatgcctgagatagctcaagcagtggaggagatggactggcttcttccta
cggatatccaagcagaatccatcccactgatcctgggaggtggtgatgtacttatggctg
ctgaaactgggagtggaaaaactggtgcttttagcattccagttatccagattgtttatg
aaacactgaaggaccaaatggaaggcaagaaaggaaaagccactattaaaactggtgggg
cagtgctcaataaatggcaaatgaacccgtacgatagaggatcagcttttgcaattggat
cagatggtctgtgttgtcaaagcagagagataaaagaatggcatggatgcagagcaacta
gaggtgtgactaaagggaaatactactatgaagtttcctgtcatgaccaaggcttgtgcc
gagttggttggtcaactatgcaggcttcactagatttgggcactgataaatttggctttg
gctttggtggcactggtaagaaatctcacaacaagcaatttgacagctatggtgaggaat
tcactatgcatgatacaattgggtgttatctagacatagataaaggacaaataaaatttt
ccaaaaatgggaaggaccttggccttgcatttgaaatcccaccacacataaggaaccaag
cactttttgcagcctgtgtactgaagaatgctgagttgaaattcaattttggtgaagaag
atttcaagtttccaccaaaagatggctatattggtctttgcaaggctcctgatggtagtg
ttgtaaaatcacagcactcaggaaatgcacaagtggttcaagcacagaaccttccaaatg
ctccaaaagcattgattgtagagccatcaagagagttggcagaacaaactttgaacaatg
tgaagcagttcaaaaaatacgtcgataatcccaaactgagggaactgctaattattggtg
gggttgctgcaagagaccaactgtccgtactggaacaaggagtggatattgttgttggaa
ctcctggaagactggatgacttggtctcaacgggaaagattaatttatctcaagttagat
tcctggttctggatgaagctgatggccttctcctccagggttattcagatttcataaaca
ggatccacagtcaaattcctcagataacttcagatggaaaaagacttcaggtaattgtgt
gctctgcaaccctgcattcttttgatgtgaagaaactatctgagaagatcatgcattttc
ccacctgggttgatttgaaaggagaagattctgtccctgaaactgtacaccatgtagttg
tgcctgtaaatccaaaagctgataaactctgggaaaggcttggaaagaatcatatcagaa
ctgatgaagtacatgcaaaagacaatacacgacctggcgctaacactccagaaatgtggt
ctgaagctattaaaattctgaaaggagaatacactgttcgggcaatcaaagagcacaaga
tggaccaagctattattttctgcaggactaaaatagactgtgataatatggagcagtact
tcatccaacaaggaggaggccctgataggaagggacatcagttctcatgtgtctgtctgc
atggtgacagaaaacctcaagaaagaaagcaaaacctggaaagatttaagagaggagatg
tccgtttcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccat
atgttatcaatgtcacactccctgatgagaaacagaactatgttcatcgaatcgggagag
taggcagagctgagaggatgggtttggcaatctcccttgtggcaaaagagaaagaaaagg
tttggtatcatgtatgcagtagtcgtggaaaagggtgttacaacactagactgaaggaag
aaggaggttgtaccatatggtacaatgagatgcagttgctgggagagattgaagaacact
taaactgcactattgcccagattgaacctgacataaaagtaccagtggatgattttgatg
ggaaagttacatatgggcagaaaagagctctgggtggtggactatataaaggccatgtgg
atattctggcaccaacagtacaagagttggctgcccttgaaaaggaggctcagacatctt
tcttgcatcttggctatcttcctaaccagctgttcagaacattctga
DBGET
integrated database retrieval system
