KEGG   Acanthisitta chloris (rifleman): 103797458
Entry
103797458         CDS       T08456                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:achl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103797458 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:achl03400]
    103797458 (MSH2)
DNA repair and recombination proteins [BR:achl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103797458 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_IV MutS_III AAA_27
Other DBs
NCBI-GeneID: 103797458
NCBI-ProteinID: XP_009067923
LinkDB
Position
Unknown
AA seq 574 aa
LNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQ
VLEKHEGAHQMLLLAVFITPLSDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLT
ELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKY
VIVDTQKNGVKFTNSKLSSVNDEYMKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVI
AQLDAIVSFAHVSNGAPVPYVRPVILEKGQGKIVLKGARHPCIEVQDEVAFIPNDIAFEK
GKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEITIVDCILARVGAGDSQL
KGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKIRAFAM
FATHFHELTALADEVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKH
VIESAREKALELEEFQNIGKSKESEGEPSAKKFYREKEEGEKIIEDFLCQVKALPLTDMS
EEDVKMKLKQLRNDVLAKNNSFVNEIISRTKVTS
NT seq 1726 nt   +upstreamnt  +downstreamnt
gttgaatttggttgaagcttttgtggtggatccagaactacgccagtgcctccaagaaga
tctcttacgtcgctttccagaccttaaccggctggcaaagaaatttcagagacaagcagc
aaacttacaagactgttaccgaatgtatcaggctattaatcaactgcctaatgttgtaca
agtactagaaaaacatgaaggagctcaccagatgttgttgttggcagtgtttataacacc
tcttagtgatatctactctgacttctcaaagtttctggagatgatagaaacaacattgga
catggataaggtggagaatcatgaatttcttgttaaggcttcttttgatcccaatttaac
agaattaagagagaagatgaatgaactggaagaaaaaatgcagtccttcttaaagagtgc
agccaaagaactaggtttggaagctggcaaaagtatcaaactggagacaaattcacagtt
tggacatcactttcgaataacttgcaaggaggaaaaggttctccgtaacaattcaaaata
tgtaatagttgatacacagaagaatggtgtgaaatttaccaacagcaaactgagctccgt
caatgatgaatatatgaagaacagagaagagtatgaagaggctcaggatgcaattgttaa
ggaaatcattaacattgcttcaggttatgcagagccaatacagaccatgaatgatgtgat
agctcagctagatgcgattgtcagttttgctcatgtgtccaacggagctccagtgccata
tgtccgtcctgtcatcctggaaaagggacaagggaagattgtgctgaaaggtgccaggca
tccttgcatcgaagtgcaagatgaggtggccttcatccccaatgacattgcatttgagaa
gggcaagcagatgttccacattattactggccctaacatgggaggaaaatcaacatacat
ccgacagacaggggtgattgttcttatggcccaaattgggtgttttgtaccgtgtgagtc
tgcagaaataaccattgtggattgtatcctggcacgcgtgggggcaggagacagtcagct
gaaaggagtgtctactttcatggctgaaatgttggaaactgcttccatccttaggacagc
atctgaaaactccctgataattattgatgagctgggaagaggaacttctacctatgatgg
ctttggcttagcatgggccatctcagaatacattgctagcaaaatccgtgcttttgctat
gtttgctacgcattttcatgaactgacagctcttgctgacgaagtgccaacagtaaataa
cctacatgttactgctctgaccagtgatgacacactgacaatgctttatcgtgtcaagga
aggtgtttgtgaccagagttttggaatacatgtagcagagttggcagctttcccaaaaca
tgtgatagaaagtgcaagagagaaagcattggagctggaggagtttcaaaacattggcaa
gtccaaggaatctgaaggagaaccatcagccaagaaattctacagagaaaaagaggaagg
tgaaaagataattgaggattttctttgtcaagtgaaagcattgccactgacagatatgtc
agaagaagacgtcaaaatgaagctgaaacagctgagaaatgatgtgctggcaaagaacaa
cagttttgtgaatgaaataatttctcgaacaaaagttacatcatga

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