Acanthisitta chloris (rifleman): 103797512
Help
Entry
103797512 CDS
T08456
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
achl01002
]
103797512 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
achl04121
]
103797512 (USP42)
Enzymes [BR:
achl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103797512 (USP42)
Peptidases and inhibitors [BR:
achl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103797512 (USP42)
Ubiquitin system [BR:
achl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103797512 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
103797512
NCBI-ProteinID:
XP_009067978
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MTIVNKPKSSNSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPAEDSSKVSVDKGPGGHI
YCRSSQKSKRFAQRDLVVNDGIAPPQRILFPPEKICMDWQQALSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINKVLCCSNDAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSNKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITVDIKAVTSVTRALEQYVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRPYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDDSVELSDIKTVLHQQAYVLFYIRRYDLSLGERAFYL
PTPSYPRSFLGQRGANSKQAGFIGPRLPPHMIKSSSRLNGNGPLKEDPSSVGVGVKRPSE
PPVACVQNWAIARPSITDPSKTQKITISIHNKLPTRQTVSQPECPSSAVEDEDLSKPIPS
STITNSSTAEPTSHVSAMSVAASVSKQEVPDDIFVEPAVNGNPKLGSDNIVPYCAESSGK
SEESKGLFKRNCNIISSNGLLLGKVVRTLHNSHSSCQSAEEERSQHELPKIDSLNGAISL
DNEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLETKPKALSPHPQDLEESLMYSQLNS
LSEEESSSGPQKFSEEDGLMEAMMIEALFGYEEARKGPSNFTFPAEKPFSQSDSETIFTK
EEVAESIVTKADNAHLNINGQHKVRKKSLDIEDEFLGQCESEDIRDKDKPRRSKEPELIS
KENPLYIKGPPESEEKLGQTSSVKPDIECSSKKLGSLDIADKCQDAKNISNTYVEVPPVN
DFCIIKLDKVLESQFSRADERLSNKIREEDKYMRKSKIKTHDSKRSDKEHYRRKRESSDS
EEKERQSRTKTDDHSHRRRRSRSVETNKQNHHKREYCSERRYRSSHHDRNSPSHGRSSGK
YYRRYRSRSRERTDQDRNRYYYSRGERAWIRERYYQDEPRRREKCRYYSDYYSSHRTRDG
RERKSSHGDRDYDKLSQPYYRSHKDYHCRSRWAHSSLSGEEDAHHFSRHRANLHHCSVPQ
QRSDKYSRDRHGLPPVPAHSNFEDSSRENRKDKLTNGKRKYSHQEESESDIEKKYRKIDD
QRIRKDKKIKKKKKSKDRHQEKDYRLSDSDCSGLHLDSDNHKQKKKKKKKRHGRKLKALL
EYLDPRFQKRTWKTKEESRTPDDHSSEEYTDQDSKQPCKEEKNYAAGDSKKYSSSSAEEC
GRDAELTDESLQYSD
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagtcaacaagccaaaatcttcaaattctaaaaaatcttcctcaaggcgatct
gacaaatctatgaaaccccggaccaaaaaaatgacgtcgcgcacggcgagcttgggccgg
gttcctcctgcagaagattccagcaaagtctcagtggacaaaggccctggagggcatatt
tattgtagatcatctcaaaaatctaagcgttttgcccaaagagatctagttgttaatgac
ggaattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcag
caggcactaagtgttggagttgggctgcagaacctcggcaacacatgcttcctgaattct
actctccagtgcttgacctacacaccccctcttgccaattacatgctctctctcgagcac
accaagtcctgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
aaggtcctgtgttgctccaatgatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaagcatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagtaataaattggacagatcttct
caagccactacacttatttatcaaatatttggaggatatctcagatcccgagtaaagtgc
ttgaattgcaaagcagtgtcagatacatatgagccatttctcgacattactgtggatata
aaggcagttacatctgtcaccagagctctagaacaatatgtgaaaccagaacaactggat
ggtgaaaatagctacaagtgtagcaagtgtaagaagatggttccagcatctaagagatac
acaatacatcgctcctccaacgtgctcacaatctccctgaaaagatttgcaaactttaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatctccgaccatatatg
tcccagtccattggggagccactcatctatgctttatatgcagttcttgttcatagtggt
ttcaactgcaatgctggacactatctctgcttcataaaggctggtaatggtctttggtat
cgaatgaatgatgactcagtagaactttctgatatcaaaacagttctccatcagcaagct
tatgtactattttatatcaggcgctatgatctgtcactcggagaacgtgcgttttactta
ccgacgccgtcgtatccgcgctccttcctcgggcagaggggagccaacagcaagcaggct
ggatttattggaccacgacttcctcctcatatgattaagagttcaagtcgtttgaatgga
aatggacccttaaaagaggatcccagtagtgttggtgttggtgtaaaaaggccttcagag
ccaccagtagcttgtgttcagaactgggcgattgccaggccttcaattacagacccgtca
aaaacccagaagatcactatcagtattcacaacaaattgcctacacgtcagactgtgtca
cagcctgagtgtcctagcagtgctgtggaggatgaggatctaagcaagcctattccttca
tccacaatcacaaattcttccacagcagagcctacctcacacgtgtctgcaatgtcggtc
gctgctagtgtctctaaacaggaggttcctgatgacatttttgtggagcctgcggtgaat
ggaaaccctaaacttggttctgataacatagtcccttactgtgcagaatcttcaggaaag
tctgaagagtctaagggcttgtttaagaggaattgcaacataatctcttctaatggactt
ttgcttgggaaggtggtccgtacgttgcataattcccattcgtcctgtcagagtgctgag
gaagaaagatctcagcatgagctgccaaaaattgattccctaaatggtgctattagttta
gataatgaatataaagaaaatggactgaaacttgacgactccacttgccaagtccaacct
gttaaaccttctgagattttcttttctaaagcaaatggagtgcttgaaacgaagcctaaa
gctttgtcaccccatcctcaagaccttgaagaatctctcatgtacagccaactgaacagc
ttgtcagaggaagaaagttcctctggacctcagaaattttctgaggaggatggtctgatg
gaagctatgatgatagaagcactctttggctatgaagaagccagaaagggtccttccaac
tttacctttccggctgagaaacctttttctcagtcagactctgaaaccatttttaccaaa
gaagaagttgctgaaagtattgtaacaaaagctgataatgcacatctcaatatcaatggt
cagcacaaggtcaggaaaaaatccttggacatcgaagatgaattccttgggcagtgtgag
tcggaagacatcagagacaaagacaaaccaagaagatcaaaagaacctgaactcatttca
aaagaaaatcctttgtacatcaaagggcctcctgagagtgaagagaaattagggcaaaca
tcctctgtaaagcctgacattgaatgtagttctaaaaaacttggatctctggatattgca
gataaatgccaagatgcaaagaacatttctaatacctatgtggaggtaccacctgtcaat
gacttttgtattataaagctggataaagtattagaaagtcaattttctagagcagatgag
agactgagtaataaaatacgtgaagaagataaatatatgagaaaaagtaagataaaaacg
catgactctaaaagatctgacaaagagcactaccgacggaagagagaaagctcagactct
gaggagaaggagaggcaaagcagaaccaaaacagatgatcattcccacaggaggaggagg
tctcgcagcgtggaaacaaacaagcaaaatcatcacaaacgggaatattgcagtgagcgc
aggtacagatcttcccatcatgacaggaacagcccaagccatggcagaagctcagggaaa
tattatcgtcgttatagatcccgaagcagagaaaggacagaccaagacaggaataggtat
tactattccagaggagagagagcttggattagagaaagatactaccaagatgaaccacgg
agacgggaaaaatgcagatactacagtgattattactcctcccatagaacaagggatggc
agagagaggaagtcctctcatggtgacagagactatgacaaattgagtcaaccctactac
aggtcacacaaggattatcactgcaggagcaggtgggctcacagctcactctccggagag
gaggatgcacatcacttcagcaggcacagagcaaacctacaccactgttcagtacctcag
cagcgttcggataaatactcccgtgacaggcatggacttccccctgtgccagcccattcc
aattttgaggactcttccagggaaaacagaaaagacaaactaacaaatgggaaaagaaaa
tactcccaccaagaagaaagtgaaagtgacatagaaaagaaataccgaaagatagacgac
caaagaatcagaaaggataagaagatcaagaagaaaaagaagtccaaagatagacatcaa
gagaaggattacagactgagtgattcggattgctctgggctccacctggacagtgacaat
cacaaacagaagaaaaagaagaaaaagaagaggcatgggaggaaactgaaagccttattg
gaatatttagatcctcgtttccagaagaggacatggaagacgaaggaagaatcccgtact
ccagatgatcattcatctgaggaatacacagatcaggacagcaaacagccctgcaaggaa
gaaaagaattatgctgcaggagacagcaagaaatacagctccagctcagccgaggagtgt
ggcagagatgcagagctgactgatgaaagccttcaatactcagactaa
DBGET
integrated database retrieval system
