Acanthisitta chloris (rifleman): 103797681
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Entry
103797681 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: versican core protein-like
KO
K06793
versican core protein
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl04514
Cell adhesion molecules
achl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103797681
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103797681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
achl00535
]
103797681
00536 Glycosaminoglycan binding proteins [BR:
achl00536
]
103797681
04091 Lectins [BR:
achl04091
]
103797681
Proteoglycans [BR:
achl00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
103797681
Glycosaminoglycan binding proteins [BR:
achl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
103797681
Lectins [BR:
achl04091
]
C-Type lectins
Lecticans
103797681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
103797681
NCBI-ProteinID:
XP_009068154
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
HPVNEFLDLFSRHMLPHAIDETHIDTESTQTEPCTSDSVQDSSEYIILDPFFPNYIEFEE
EEDCENTTDVTAPPALQFINGKQQVTSAPKSTKAEEARSDQIESVAHSKNVTFSQISETN
TFIIPESEASGTMQPSKAGEVIGVFEVTQPTVDVAMLEPVYSGESEVLTTEKSIAITSSY
EQSLKNNGETITWHGTEENSTKDSKNLLLITSESSGDGSVESDPSTSVFSGAVTMSRKED
DEKKSSLTSAPDAFTVEISAVTASLDAVFNPGMVGMGVTNLIPEEATPAPGDHYKSTTKL
NANSPVENLLETSHAAKPEMSAASFMVLDGSGDVKENTTVSSAMTDEIAVTLSMKDISLG
SGTVLPTDVSVTISGITSALPEDISTHYSAFDQSLEVTAATNSLSEFITEKVVASSLVTE
KNIDDEKETQSTVYSGHQNSATTAEGILESNELGSTTSEVRTVSQEPTSFRKLEPDTVCS
EIKRITTIPFLREKKFFINEGSAEEPADVFSGVPTKKVVSTDSPFIDPGSGDIDDIFQSA
TLVPLKPVTETQTEKHEGKDYIINDASPKIATTEYEEHARTDESAVSVSSTGSDVLTKGS
GVTSQMSQDVSSTGNPGEQNKEAELTYTAPSDIKSGSIKEITSHIAPGIQTAGSETGEVI
SSPESVVSNNPHSDVVTHGTGSIKAVVESTVSKNAKVGSTTVSLGKILLIEHGSGEEFKG
DSSTTKLMSNGPTEEKLAGDFSLTRDQGSGEPDTFIGSFGKNTSSPSAKTEIWENYDREA
VSTSSMDLAFTTDPDGVGTSSEHEVTTMGTVTDMRMEEKTIDKLIVRGISTKIPLVEDIH
SGEDRPGEISPKAVGSSEETTTDSFFKSTQSSHEHLGFLNVPTVTPYSEEKELETELVQK
ILLPFNDDRVTKPSKTERKYMTTPVTYIXXXXXXXXKDVPRTLLTPKEENRTNTELIGDP
LFSGQGSGDDLAVIPSVVPLVIKEIKSTSSPHISHPANTGPELSMGETQDFERGSTQENA
EFNEIVTSAATELPSETGGRLPASVYTSSPDLGENTSKSFISKENEVTTHYFVVNEEPLH
KKTDYRRGENGTDRTTATSKAVSQEETSHFLTKGVIIPVHVILNEPSNPETEESLVTSTT
KMSGRVLPESSGEGSGWVSVSDSSSPDMLTHLSISSVSKVELNVSSSVPGHVYSEVLSTE
APIDGSQTVIPGLSSLFTEEKEIVANPAAGHPKTTASEELTSDTGIYEKIIPMIDDKRSV
ILNVSVYGDIALIEERLQIPSEETTIIDMDHSKLAPEDIISVQTTPNPVRQSTYGNDDSM
TAEGEKYNARPIFSIAKEKPFGSGDSLSWTTSSPPSKLVTSGHTPKTDDKDLGSGNVMKF
ARETFTTTELPELSVFLPTIPSLASPQVPGVSEHIATSATEDTYELNTSANNQVTADQSE
TISVSGFSGIDQEELADNEPVIPSLTPVLTTEPEKALTTDMLELGIVTTQHASQPTTVSP
SKKAENHPTVRTKSASAAYDKTDSVSFYSVPQTPKSSVTVQLVDRVSEYPEQILPTTSSL
KDSDQSDSLEGAFKEVSSDIAATYKPPTTELVDTMESSLLELSPETVSESTISESTPHFN
GFVTGQTEETETPVTDLAVEEEATVSGDSPSIHVLPTAFLNFGNRLSTHVPKGSTIKVEA
SSGRVNNPHQGQDWSTERENPWLVSTPVSDPPNSIESEPFKPDQEAVTMLTSSSQLLDVS
TETQSALFGRGEITTIASNIATNSIAPGNSPYQNEQSTISSEETNTVELVTSSFSLPEVT
NGSDFQIGTSVGSVEGTAVQIPGQDSCKSNPCLNGGTCYPRGSFYICTCLPGFNGEQCEL
DIDECQSNPCRNGATCIDGLNTFTCLCLPSYIGALCEQ
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atcatccggtgaatgaatttttggatctgttcagtcgccacatgcttccccatgcaatag
atgaaacccacattgacacagagtcaactcagactgaaccctgtacttcagactctgtgc
aggattcatctgaatatataatattggatcctttctttccaaactatatagagtttgaag
aagaggaagactgtgaaaatactactgatgttacagctcctccagctttgcagtttatca
atgggaagcaacaagttactagtgcacctaagagcacaaaagctgaggaagcgagaagtg
accaaattgaaagtgttgcacattccaaaaatgtaaccttttctcaaatcagtgaaacaa
acacatttataatacctgagtctgaagcttccggtactatgcaaccaagcaaagctggag
aagtaataggggtgtttgaagttacacaaccaacagtagatgttgcaatgttagaacctg
tttatagtggtgaatcagaagtcctcacaacagaaaaatcaatagctattacttcttcat
atgagcagtctctgaaaaacaatggagagaccataacatggcatggaactgaggagaact
ctactaaagatagcaaaaacttgcttttgattactagtgaatcttctggagatggctccg
ttgaatctgatccatccacttctgtcttctcaggagctgtgacaatgtcaagaaaggaag
atgatgaaaaaaaatctagtctaacttctgctcctgatgcatttactgtggaaatttctg
ctgtaactgcttctctggatgctgttttcaatcctggtatggtaggcatgggtgtgacca
accttattccagaagaggcaactcctgctccaggagatcattataaatcaactactaaac
ttaatgcaaattcccctgttgaaaatcttttggaaacaagtcatgcagcaaagcctgaga
tgagtgctgcttcttttatggttctagatggctcaggggatgtaaaagagaacaccactg
taagttcagctatgacagatgaaatagcagtaacgctttcaatgaaagatatttctttgg
gctctggcacagtactgccaacagatgtttctgtaaccatttcaggaatcacctctgctt
tgcccgaagatataagcactcattattctgcttttgatcaaagtctggaagtaactgctg
ccaccaactctctgtctgagtttattacggaaaaagtagttgccagctctcttgtaactg
aaaagaatattgatgatgaaaaagaaacacagtctactgtttattcaggtcaccaaaatt
cagctactactgcagagggaattttggagtcgaatgaacttgggagcactacaagtgaag
tcagaactgtgagtcaagagcccacctcattcagaaaattggaaccggatactgtatgtt
ctgaaatcaaaagaatcaccaccattcctttcttaagagaaaagaagttttttataaatg
aaggatcagcagaagaaccagcagacgtattttcaggggttcccacaaaaaaagtggtaa
gtactgactccccatttattgatccaggttctggagacatagatgatatctttcagtctg
ccactttggttccactaaagcctgtcactgaaacacaaactgaaaagcatgaaggaaaag
actacatcataaatgatgcctcaccaaagattgcaacaacagaatatgaagaacatgcaa
gaacagatgaatctgcagtatcagtttcaagtactgggtcagatgtcttgacaaaggggt
ctggagtaacaagtcagatgtcccaggatgtgtctagcacaggaaacccaggagaacaaa
acaaggaagcagaactaacctacacagctccttctgacataaaatctggttctataaaag
agataacatctcatattgcacccggaattcaaactgcaggttcagaaacaggtgaggtca
tatcatctccagaatcagtggttagtaacaatcctcacagtgatgtagtgacacatggta
ctggcagcataaaagcagtagttgaatctacagtaagcaaaaatgcaaaagttggttcta
caactgtctcattgggcaagattctcctaattgagcatggttctggggaagaattcaaag
gtgacagcagcaccacaaaacttatgtctaatggacctactgaagaaaaacttgcaggcg
atttctcacttactcgagatcaggggtctggagaaccagacacatttattggatcatttg
gaaaaaacacatcttcccctagtgcgaagacagaaatatgggagaattatgacagagaag
ctgtcagcacatcatctatggaccttgccttcactactgaccctgatggggtaggcacaa
gttctgagcatgaagtaaccaccatgggaactgtaactgacatgagaatggaagagaaga
caattgacaaactgatagtgagaggtatttccacgaagattcctttggtggaagatatac
attctggggaagacaggccaggggaaatttcaccaaaagctgtaggatcttctgaagaaa
caacaacagactcattctttaaaagtacacagtccagccatgaacatctgggttttttaa
atgttccaactgtcactccatattcagaagaaaaggaattagaaactgaacttgttcaga
aaatccttttgccatttaatgatgacagagtaaccaagccttcaaaaactgaaaggaaat
acatgaccactccagttacatatatanngnnnnnnnnnnnnnnnnnnnnaaaagatgttc
ccagaacactcctgacacctaaggaagaaaatcggacgaataccgagctgattggtgatc
cattgttttcaggacagggttcgggagatgaccttgctgttattccttctgtagtgccat
tggttatcaaagaaatcaagagtacttcaagtcctcacatttcacatcctgcaaatacag
gacctgagctttcaatgggcgagacacaagactttgaaagaggaagcactcaagaaaatg
ctgaatttaatgaaatagttacaagtgctgcaactgagctgccatcagaaactggaggcc
ggttgcctgcttctgtctataccagttccccagatttaggagaaaatacctccaagagct
tcatctctaaagagaatgaagtgacgacacattattttgttgtgaatgaggaacctctcc
ataagaaaactgactataggagaggagaaaatggaacagataggacaacagctacttcta
aagctgtttctcaagaggaaacttcacattttctgactaaaggtgtcataattccagtgc
atgttatactgaatgaaccttctaatcctgaaacagaagaatctcttgtaacatcaacaa
caaaaatgtcaggcagagtattacctgaaagctctggggaaggatctggctgggttagtg
tttcagattcatcttcccctgacatgcttactcatttgtcaatatcctctgtatcaaaag
tagagctaaatgtttcatctagtgttcctgggcatgtttattctgaagttctgtccacag
aggcaccaatagatggatcacagactgtgattccaggactatcatccctttttacagaag
aaaaagagattgtggcaaatccagctgcaggtcatccaaagacaaccgcatcagaagaac
taacaagtgatactgggatatatgagaaaattattcccatgattgatgataaaagaagtg
ttatattgaatgtttctgtttatggcgatattgctctaatcgaagaacgacttcaaatcc
catcagaagaaacaactattatagacatggatcactcaaaattggcgcctgaagatataa
taagtgtgcagacaacgccaaatcctgttagacagtcaacatatggcaatgatgatagca
tgacagctgaaggggagaaatacaatgcaagacctatattttccatagccaaagagaagc
catttggatctggtgacagtctttcttggactacttccagtccaccaagtaaattggtaa
catctgggcacacaccaaaaacagatgacaaggatttgggttcagggaatgtcatgaagt
ttgcaagagaaactttcaccactactgaactccctgagctgagcgttttccttcctacaa
taccatctctggcaagtcctcaggtacctggtgtgtctgaacatattgcaaccagcgcca
cagaagacacctacgagctgaatacgtcagcaaacaaccaagtaacagcagatcaaagtg
aaacaatctctgtctctggcttttctggaatagaccaagaagaactggctgataatgagc
ctgtgattccttctcttacaccagttttaactactgagccagaaaaggctttaacaactg
acatgcttgagttaggtattgtcaccacacagcatgcatcccaaccgacaactgtatcac
ctagcaagaaagcagaaaatcatcccacagttcgcacaaaatcagcatcagcagcgtatg
acaaaacagattcagtgagtttttattctgttcctcaaactcctaaatcttcagtcactg
ttcagttagttgacagagtatctgagtatcctgagcaaattcttccaacgacatcatcat
tgaaggattcagatcaatcagattcattggaaggagccttcaaagaggttagctctgata
ttgctgcaacatacaaaccacccactacagaacttgttgacacaatggagtcttctctgc
tggagctttctcctgagactgtttcagaaagcacaatttcagaaagtactcctcacttta
acgggtttgtaacaggccagacggaggagacagaaactcctgtaactgatttagctgttg
aggaagaagctactgtttctggagattctccatcaatacatgtcttgcctactgcttttc
tgaattttggaaatagactgagcacacatgttccgaaaggtagcacaataaaagttgaag
cttcctcagggagagtgaataatccccatcaaggacaagactggagcacggagagagaga
acccatggcttgtttccacacctgtttcagatccacccaacagcattgaaagtgaaccat
ttaaacctgaccaggaagcagttacaatgctaacttcatcttcccaacttttggacgtaa
gcacagaaacacaatcagctttgtttgggagaggggagatcacgaccattgcttctaaca
ttgcaacaaacagcattgcccctggaaacagtccatatcaaaatgagcagtcaaccataa
gttctgaggagacaaacactgttgaacttgtaacctcatcattttcccttccggaggtca
ctaatggatcagatttccagattggcaccagtgtgggttcagttgaaggcacagcagtgc
aaattccaggccaagattcatgcaagagcaacccttgcctcaacggtgggacctgctacc
cgcgtggttcattctacatctgtacctgtctgccaggtttcaatggtgagcagtgtgaac
tagatattgatgaatgccaatctaacccctgtcggaatggagccacatgcatagatggcc
tcaacaccttcacttgcttgtgtctgccaagctatataggtgctctctgtgaacaag
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integrated database retrieval system
