Acanthisitta chloris (rifleman): 103797764
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Entry
103797764 CDS
T08456
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
achl04131
]
103797764 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
achl04147
]
103797764 (COPB1)
Membrane trafficking [BR:
achl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103797764 (COPB1)
Exosome [BR:
achl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103797764 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
103797764
NCBI-ProteinID:
XP_009068243
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKVKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVSVGPTQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLQKASLATTLTKIALRYVSLVQEKKKQNSFNAEAMLLMATILHLGKSSLPKKPIT
DDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEKRNVTVQ
PDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLTGFSDPV
YAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPHDFANIK
ANVKVASTENGIIFGNVVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEFRQMWAE
FEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDAL
ANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTTL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagagaatgtgtgttacaccttaatcaacgttcccatggattcagaacca
ccttctgaaatcagcttaaaaaatgacctggaaaaaggagatgtcaaggtgaagacagag
gccttgaagaaggtgatcattatgattctgaatggtgaaaagctgcctgggcttctgatg
accatcatacgttttgtactgcctctccaagatcataccatcaaaaaactgctgcttgtc
ttttgggagattgtgccaaagaccactccagatggcagactgctgcaggagatgatactc
gtgtgtgatgcatacagaaaggatcttcagcacccaaatgaattcatccgaggttctact
ctccgttttctgtgcaagctgaaggaagcagagctgctggagcctttgatgccagcgatc
cgcgcatgcctggagcaccggcacagctacgtgcgcaggaacgcggtcctggccatttac
accatctatagaaactttgaacaccttatacctgatgctcctgaactgatccatgatttc
ttggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgtattgaccaagtccagacttttggt
gacatactgcagttggttattgttgaactcatttacaaggtctgtcatgcgaatccatcg
gagagagctcggtttattcgctgcatctacaacttactgcagtcatcaagccctgcagtg
aagtatgaagctgcaggtactctagttacactctccagtgcaccaacagcaatcaaggca
gctgcccaatgctacatagatttgatcattaaagaaagtgataataatgtgaaactgatt
gtcttggatcggttgattgaattaaaggagcatccctcccatgaacgagtgttacaggat
ctagttatggacatcctcagggtgttgagcaccccagatctagaagtgcgcaaaaaaacc
cttcagctggctctggatcttgtgtcttcaagaaatgtggaagagcttgtgattgttctg
aagaaggaagtgattaaaactaataatgtgacagagcatgaagacacagacaagtacaga
cagctgctcgttcgtacgctgcattcctgtagtgttcggtttccagacatggctgcaaat
gttattccagtgctgatggagttcctcagtgacaataatgaagcggcagccgctgatgtc
ttggagtttgtgcgggaagcgatccagcggtttgataacctcagacctcttattgttgag
aagatgcttgaagtctttcacgctattaaatctgtcaagatttatcgaggagcattatgg
atccttggagaatattgcagcacaaaggaagacatacaaagtgtaatgacagaagttcgc
agatcactgggagagatcccaatagtagaatctgaaatcaagaaagaagctggtgagcta
aaacctgaggaagaggtgtctgtgggtccaacccaaaaattggttacagagatgggcact
tatgcaacacagagtgctttgagtagctcccgacctgccaaaaaggaagaagacagacct
cctttacgaggattcctgcaaaaagcttcccttgctacaactttgaccaagattgctcta
cgatatgtgtcactagttcaggaaaagaagaaacaaaattcctttaatgctgaagctatg
ctgctgatggccactattctccatttgggaaagtcttcccttcccaagaagccaattaca
gatgatgatgtggatcgtatttccttgtgtctgaaagttttgtcagaatgttctcctctt
atgaatgacattttcaacaaggaatgcagacagtccctctctcacatgctgtcagccaag
ctagaagaggagaagctttcccagaagaaagaatccgagaagaggaatgtgacagttcag
ccagatgatcccatttccttcatgcagcttactgctaaaaatgaaatgagctcaaaagaa
gaccaatttcagcttagcctgcttgcagcaatgggaaacacacagaggaaagaggctgct
gatcctcttgcttccaaacttaataaggtgactcagctgacaggtttctcagacccagtc
tacgcagaagcttatgtccacgtcaatcagtatgacattgtgctggatgtgctggtggtc
aaccagaccagtgacaccttacagaactgcacactggaactggctacgctgggtgacttg
aaacttgtggagaaaccatctcctctgacactggctccccatgattttgcaaacattaaa
gctaatgtcaaagtcgcttcaacagaaaatggaatcatttttggtaatgttgtgtatgat
gtgtctggagcagccagtgacaggaactgtgtggttctcagcgatatccacatcgacatc
atggattacatccagcctgcttcttgcacagatgctgagttcagacagatgtgggcagag
tttgagtgggaaaacaaagtaacagtgaatacaaatatcattgatttaaatgaatactta
cagcacatactgaagtcaaccaatatgaaatgcctgactccggagaaggcactttctggt
tattgtggctttatggcagccaacctttatgcacgttccatctttggggaagatgcactt
gccaatgtcagcattgaaaagccgattcacctcgggccagaggcacctgtcactgggcac
atccgaatccgggcaaagagccagggaatggccctgagtcttggagataagatcaatctg
tcccagaagaaaacaactttataa
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