KEGG   Acanthisitta chloris (rifleman): 103797778
Entry
103797778         CDS       T08456                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl03030  DNA replication
achl03410  Base excision repair
achl03420  Nucleotide excision repair
achl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:achl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103797778 (RFC2)
   03410 Base excision repair
    103797778 (RFC2)
   03420 Nucleotide excision repair
    103797778 (RFC2)
   03430 Mismatch repair
    103797778 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:achl03032]
    103797778 (RFC2)
   03036 Chromosome and associated proteins [BR:achl03036]
    103797778 (RFC2)
   03400 DNA repair and recombination proteins [BR:achl03400]
    103797778 (RFC2)
DNA replication proteins [BR:achl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103797778 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103797778 (RFC2)
Chromosome and associated proteins [BR:achl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103797778 (RFC2)
DNA repair and recombination proteins [BR:achl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103797778 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103797778 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 nSTAND_NTPase5 AAA_14 AAA_lid_RFC1 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_11 AAA_assoc_2 AAA_19 nSTAND3 DNAX_ATPase_lid AAA_24 MipZ AAA_18 AAA_5 AAA_28 ABC_tran AAA_25 AAA_23 AAA_30 SLFN-g3_helicase RuvB_N NTPase_1 MeaB RNA_helicase Rad17 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 103797778
NCBI-ProteinID: XP_009068257
LinkDB
Position
Unknown
AA seq 310 aa
MKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLLKVVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTHSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEYIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKTLAPAAS
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaactttgtgaaatagttggaaatgaagacaccgtgagcaggttggaggtctttgca
aaagaggggaatgtcccaaatattataattgctgggcccccaggaacagggaaaaccacc
agtatcctctgcttggctcgtgctctgcttggtcctgcattaaaggatgctgttttggag
ctgaatgcctcaaatgacaggggcattgatgttgtgagaaacaaaatcaaaatgtttgcc
cagcagaaggtcacactgccaaagggtcgacacaaaataatcatcctggatgaagcagac
agcatgacagatggagcacagcaagccttgagaagaacaatggagatttattccaaaacc
acacgatttgcactggcctgcaatgcctcagacaaaatcatagagcctatccagtcccgg
tgcgcagtgctgcgttacaccaagctcacagatgcacaaatccttgccaggctactgaaa
gttgttgagaaggaagatgtaccatatacagatgatggactagaagccattatcttcaca
gcccaaggagatatgagacaggcattgaacaacttacagtccacacactctggatttggc
ttcataaacagtgaaaatgtcttcaaggtctgtgatgagcctcatcctctgcttgtgaaa
gaaatgatacaacactgcataaatgcaaatattgatgaagcctacaagattcttgctcac
ctgtggcgacttggatactctccagaagatgtgattggcaacatcttccgtgtgtgtaaa
acctttcaaatgccagaatacctgaaactggaatatatcaaggagattgggtacactcac
atgaagatagcagaaggtgtgaactccctgctacaaatggctgggctgctggccaggctg
tgtcagaagaccttagcccctgcagcaagttag

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