Acanthisitta chloris (rifleman): 103798011
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Entry
103798011 CDS
T08456
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103798011 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103798011 (WDR33)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103798011 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Collagen
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
103798011
NCBI-ProteinID:
XP_009068500
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGMPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKDDFRDDFHPDKRFGHRL
REFEGRGGPPLQEEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRYPRDPE
DVRFRGRRDESFRRGGPSRHEGRGSRGRDGFPGPEDFGPDDAFESPDENSRGRDHGARGR
GRGASRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPHPDHPPHDRHSPANRERSSSL
QGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAQKSGRSSSLD
GDHHDGFHREEAFGGGPAGGNNPSRGGRSGSNWGRGNNMNSGQSRRGASRGGRGR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagatcggctctccgccgcgcttcttccacatgccgcggttccagcaccag
gcgcccaggcagctcttctacaagaggcctgacttcgcgcagcagcaggccatgcagcag
ctcaccttcgacggcaagcgcatgaggaaagctgtcaacaggaagaccatagactacaac
ccctccgtcatcaaatacctggagaacagagtatggcagagagaccagcgagatatgaga
gcaatccagcctgatgcaggatactataatgatttggtccctcccataggaatgctgaac
aaccctatgaatgctgtgacaacaaagtttgttcggacatctactaataaagtcaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggagagttcacattatggaatggactgactttcaattttgaaacgatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaaatgtgttgactggcacccaacgaaagggttagttgtt
tcgggaagtaaggacagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacgctacatgcccataaaaacactgtgatggaggtgaagctgaatctgaatggc
aactggctgctgacagcttctcgtgaccacctttgtaagctctttgacatccgtaacctg
aaagaagaactccaggtcttcagaggtcataagaaggaggccacagctgtggcctggcac
cctgtgcacgaggggctgtttgccagcggagggtctgatggctccttgctcttctggcat
gttggggttgaaaaggaggtcggtggaatggagatggcccatgaaggaatgatctggagt
ctggcatggcatccccttggacacattctctgttcgggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataagatgagagatcgttacaacctgaacctgctg
ccagggatgtcagaggacggtgtagaatatgctccaggagatgatctggaaccaaacagc
ctggcagtgattcctgggatgggaatacctgaacaactgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgacatcgaaatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcgtggatgcagaataaagttcctctgcctccc
ccacctgagccactgaatgacagaaaagaagatattaagctggaagagaaaaagaagtca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacagctcttggag
caattgaagattgagagacttgctcaaaaacaagctgagcaagtgcagcctccaccccca
ggaggatctcttcatggaccccaacctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcaaccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaatgggacctcaa
ggtccattacaccaaggagctggaggtccccaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggacttacatggacatcaagga
atgcagagacatccaggccctcatgggccgatggggcctccaggtccacagggtagtgct
ggtccacaaggccacttaggaccacagggtatgcctgggtctcagactcatttaggacca
cagggtccacctggcccacaaggtcacttgggtcctcaaggtcctcctggcggtcaagga
atgcaggggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaagga
gctccaggatctcaagggatgcagggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctaatccacaaggg
atgatgatgggtcatccgcaagaaatgagaggtcctcatatgcaaagtggtttactagga
cacggtccccaggagatgcgaggcctccagggacctccgccccaaggtacaatgctagga
ccaccacaggaaatgcgtgggccgcccggtccgcagggccagcagggacctccacagggc
tccctggtggggcctcaaggcaacatgcaaggacctcagggacagccgaacccttcgagg
ggcccacacccctcccagggccctctgcccttccagcagcagaaaacacctctgttgggt
gacggccctcgccccccgttcaaccaggatggacagaacccaggtcctcctccactgatt
ccaggcctgggccagcagggaggacaaggtcgtctcggccctcacaaccaaggaccaggt
cttaacaaagatgacttccgtgacgacttccacccggataagagatttggccatcggtta
cgggagttcgaggggagaggaggtccaccactgcaggaggagaagtggaggcgaggagga
cctgggcctcccttccctccagatcacagggaattcgaaggaggcggctcaaaccgaggc
cctcctggtgcttgggaaggacggagaccgtcggacgacagatacccgcgggaccctgag
gacgtgcgcttccgagggaggcgggacgagagcttcagaagaggaggaccctcgaggcac
gagggccggggatccaggggcagagatggctttcctggccccgaagattttgggccagat
gatgcttttgagtctccagatgaaaactcgagaggaagggaccatggtgcgcggggccga
ggccgcggtgcttctagaggagcccggaagggtttgcttcctactccagatgaatttcca
cgctttgaaggagggaggaaaccagaatcctgggatggaaacagagaaccagggcctcat
ccagatcaccctcctcacgacaggcactctccagccaacagagaacgttcctcctccctc
cagggcatggacatggcctcactgccccctcggaaacggccctggcacgacgggccaggg
acctctgaccacagagacatggatgctccaggtggacctccagaggagaggggcaaagga
cgaggaaattcaggaccttcacagagagcacagaaatctgggaggtctagttctttagat
ggagatcaccacgatggattccacagggaggaagcctttggtggaggccctgcaggaggc
aataacccctctcgagggggaaggagtgggagtaactggggaagaggaaacaacatgaac
tctggccagtcacgcagaggagcatccaggggtggcagaggccgatag
DBGET
integrated database retrieval system
