Acanthisitta chloris (rifleman): 103798014
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Entry
103798014 CDS
T08456
Symbol
TIA1
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
KO
K13201
nucleolysin TIA-1/TIAR
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103798014 (TIA1)
03041 Spliceosome [BR:
achl03041
]
103798014 (TIA1)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103798014 (TIA1)
Spliceosome [BR:
achl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103798014 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
RRM_3
Nup35_RRM_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
103798014
NCBI-ProteinID:
XP_009068505
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR
KIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD
MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL
SYDDVVTQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE
SAAHAIVSVNGTSIEGHVVKCYWGKETPDMVSPVQQNQLSYPQPYGQWGQWYGSAQLGQY
VPNGWQVPPYGVYGQAWSQQGFGQTQSSAAWMSPSYSVQGPSGSXAAHLPTQPGYRVGYE
TP
NT seq
1090 nt
NT seq
+upstream
nt +downstream
nt
gtacgtggggaacctgtccagggacgtgactgaggctctgatcctccagctcttcagcca
gataggaccatgcaagaactgcaaaatgatcatggatacagctggaaacgacccgtactg
cttcgtggagttctacgagcaccggcacgcggccgcggcgctggctgccatgaacggcag
gaagataatgggtaaggaggtcaaggtgaactgggccaccacccccagcagccagaagaa
agacaccagcaaccatttccacgtctttgtcggagacctcagtccagaaatcacaactga
agatatcaaagcagcttttgctcccttcggaaggatatcggatgcacgggtggtcaagga
catggcaacagggaagtctaaaggctatggcttcgtctccttcttcaataagtgggacgc
ggagaacgcgatccagcagatgggtgggcagtggctcgggggaaggcagatccgaacaaa
ctgggccacgaggaaacctccagctccaaagagcacgtatgaatcaaacaccaaacagct
gtcgtacgacgacgtggtcacccagtccagccccagcaactgcaccgtgtactgtggggg
ggtgacctcgggcctgacagagcagctgatgcgccagaccttctcccccttcgggcagat
catggagatccgagtgttcccggacaaaggttactccttcgtgaggtttaattcccatga
gagtgcagctcatgccatcgtctccgtcaacgggacaagcatcgagggccacgtggtgaa
gtgctactggggcaaggagacaccagacatggtcagccccgtgcagcagaaccagctgag
ctacccccagccctacgggcagtgggggcagtggtatggcagtgcccagctcgggcagta
cgtgcccaacggatggcaagttcctccctacggcgtctacggccaggcctggagccagca
gggattcggccagacccagtcgtcagcagcgtggatgagtcccagctacagcgtgcaggg
ccccagtggctctngtgctgcccacctgcccacccagcctggctaccgcgtgggctacga
gaccccctga
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