Acanthisitta chloris (rifleman): 103798139 Help Entry 103798139         CDS       T08456                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism achl  Acanthisitta chloris (rifleman) Pathway achl04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:achl00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103798139 (COL17A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen DUF4869 LapA_dom Motif Other DBs NCBI-GeneID:  103798139 NCBI-ProteinID:  XP_009068632 LinkDB All DBs Position Unknown AA seq 1444 aa AA seqDB search GSGRLNSTSSSSGYRQAQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPEFPRKD VASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSPSSTLPI PKKAVVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSSSLLNAMS HSTGSVFGVPNNLAPSNHTLNAGLSSSSTVFGVQNNLSPSSTSMTHNATAASAAYGMKNT SQSNTTAHTGVSASAGGTVLSSQGDDVLRKDCKFLLLEKENAPAKEMELLVMTKDGGKVF NASTTGLNGGSFVEDTLKKDKQGFSSSYATDTGLKSDANGGLKSMPKRDKETYAEIRSGD AGGAMGSAPSWCPCSSCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEVRKLKSRMENLEK INDDFLAINQGNPKIEKYVSRLGFLHSTSPSSTFPHQNEESIWLMVKSRLNKEMEQGYFR GERGEPGAKGDMGMQGPKGDRGLPGVPGXPGPIGHQGPEGPKGQKGSMGEPGMEGPMGQR GREGLPGPRGEPGPPGFGEKGDRGAVGEPGPAGPPGPPGSAGLKGPMGSPGPQGLPGPPG LQGFRGEAGIPGAKGEKGASGPPGPKGDQGEKGSRGMTGEQGSRGIPGPPGEPGAKGPAG QAGRDGQPGEKGEPGLMGMPGARGPPGPTGDAGQPGLTGPQGPPGLPGNPGRAGAKGEPG APGKVISAEGSSAITLPGPPGPPGPPGPTGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAV IETIRTEVSSLASQMLGDLQGRAGPPGPPGPPGESVQGPPGPRGPPGLPGPPGPPGRPGS SMSTSEAFFTGPPGPPGPPGPKGDQGERGPRGFTGEPGEPGLSSFSSHGETVTIQGPPGP PGPPGPKGDAGVPGAPGIPGSPRGGSRQIQGPPGPPGPPGPPGPGGSSYQEIQQYVSDYL KSGNVRHYLTGAQGPPGPPGPPGVITTADGTTLDYAELATRVVSYMTSSSDRYQEFTSSV STRSILYQELVDLLQREEIRQYLIGLRGPQGPPGPGGDGMSVSLDYDELTRRFISYLTSS GMSIGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPQGPPGIPGSPGTSLED VSAYLQNVGYSSLSGVRGPPGPPGPPGPPGFSGTGLLSYADIAHNDEFRSELIQYLKSQE VQSYISGPPGPPGPPGPPGPKGDSGLVSGSMSSAYQGLLTSERRQGGSLGAEGSRGGSLG TGSSYGSSRSSMSSYHSSVGSDGAYDASMGSDGSFDGLLTEEESHRSAGSSRSYSNSFTG SLDYNELALRVSESLQSQGILQDLMSYTAQGPAGPPGPPGPPGISKVFAAYGNVTADLMD FFRTYGAIQGPPGEKGERGYPGPKGDPGPMGPPGRHGHRGPKGEKGEKGEQVYVGRRKRR SVGV NT seq 4337 nt NT seq  +upstreamnt  +downstreamnt gtggaagtggtagactgaattcaacatcatcatcctctggctacagacaagctcagtctc ccagctctactctcaccaaatcacctggctcaacatttgaaagaaaaacctatgtcaacc gccatgcaacatatgaagggagctccagtgccaactcttctcctgagtttcccagaaaag atgttgcatctgcctccacgagaggaagaagccaaagtcgagagagtgaaatacgagtcc gactgcagagtgcatctccctctggcagatggacagagttggatgatgtgaaacgtttgc tgaaaggaagtcgatcagccagctgcagcccgacccgatcaccatccagtacactgccca taccaaaaaaggctgtggtggagacgaagatggttactgagagctctcaatcagtgtcag gaacatatgacacaaccatactgaatactgccctcccttcatacatgtggtcctccacgc tgcctgctgggtcttcccttggtggataccataacagctcttccttgcttaatgccatgt cccactctacaggatcagtttttggtgttccaaataacctagctcccagcaatcatactc tgaatgcaggcctgagctcttcctctacagtgtttggagttcaaaacaacctgtctccaa gctctacaagcatgacccacaatgctactgcagcctcagcagcatatgggatgaagaaca cttctcagagcaacaccacagcacatactggtgtgtcagcctcggcggggggaactgttt tgagctcccagggagatgacgttctgcgcaaagactgcaagttcctgctgctggaaaagg agaatgccccagcaaaggagatggagctcttggtcatgacaaaggatggtggcaaagtct ttaatgcctctaccactgggcttaacggaggatcctttgtagaagacactttgaagaaag acaagcagggattttcctcctcttatgctacagatactggcctaaaatcagatgcaaatg gagggctgaaatccatgccaaaaagggacaaagaaacttatgcagaaatacgaagtggtg atgcaggaggtgcaatgggatcagcaccatcctggtgtccctgcagttcctgctgtagct ggtggaaatggctcctgggattgcttctggcctggttgtttctccttggattgctttttg gactcattgctctggcggaagaagtgagaaagctgaaatctcgtatggaaaacctggaaa aaatcaatgatgacttcctggcaattaaccaagggaatccaaaaatagaaaagtatgttt caagactaggctttcttcatagtacctcaccttcttcaaccttcccacatcaaaatgaag agtcaatctggttgatggtgaagagcagactgaacaaggaaatggagcaaggctacttcc gaggggagagaggagaacctggtgcaaaaggtgacatgggaatgcaaggtcccaaaggag accgaggacttcctggtgtcccaggnnnncctggtccaattgggcaccaaggaccagaag gaccaaaaggacagaaaggcagcatgggtgagcctggcatggaaggtcccatgggacaaa gaggtcgagaagggctaccagggcctcgaggggagccaggtccacctggatttggagaaa aaggagacagaggtgctgttggtgagccaggtcctgcagggccacctggacccccagggt ctgctggcctgaaaggtccaatgggttctccaggcccacaaggtcttccaggtcctcctg gcctacaaggatttagaggagaagcaggtatcccaggtgctaaaggtgagaaaggagcca gtggaccccctggacccaaaggtgatcagggtgagaagggttctcgtggaatgacaggtg aacaaggctcaagaggaattcctggacctccaggagagccaggggctaaaggacctgcag gacaagctggccgtgatggacagccaggagaaaaaggtgaaccaggtctcatgggaatgc caggtgcccgtggccctccaggacccactggagatgcaggacagccaggactcacaggac cccaaggaccaccaggacttccaggcaacccaggccgagcaggagctaaaggagaacctg gagctccaggaaaagtcataagtgctgagggatcatcagctattactctgccaggtccac caggtcccccaggcccacctggccccactggacccccaggtgttccaggtcctgttggac cagctggtctccctggacagcaaggtccacggggtgagaagggatccccaggggaagctg tgatagaaacgatcagaacagaagtctcatcattagcatctcagatgctgggagatttac aaggacgagcaggaccaccaggtccccctggaccaccaggtgaatctgtgcagggacccc ctggacctcgtgggcccccaggactgccaggacctccaggcccaccagggagaccagggt cttctatgtccacttcagaagcattcttcacaggcccaccaggtccaccaggcccaccag gcccgaagggagaccaaggtgaacgaggcccacgaggattcacaggagaaccgggtgaac ctggcctctcgtcattctcctcccatggtgaaacagtcaccatacagggacccccaggcc cgccaggcccacctggaccaaaaggtgatgcaggtgtccccggcgctcctggcatcccag gatcacctcgaggtggatccagacaaattcagggacccccaggacctcctgggccacctg gtcctcctggcccaggtggaagttcatatcaagagattcagcagtatgtcagtgactacc tgaagagtggcaacgtaagacattacttgactggtgcccaaggcccaccaggccctccag gcccacctggagttatcaccactgcagatgggacgaccttggattatgcagagctggcta cccgtgttgtgagctacatgacaagctcttcagatcgctatcaggaatttaccagctcag tatcaactaggtccattttgtaccaagagcttgtggacctgctgcagagagaagaaattc gtcagtatctcattggacttcggggcccacaaggacctcctggaccagggggagatggca tgtctgtgtcactggattatgatgagctgaccaggaggtttatcagctacttgacaagtt ctgggatgagcattggacttcctggaccacctgggcctccaggaacccctggtatatctt acagtgacctgacagcgtatctgcgaaactctgaattcagcggtcttgttgggccccctg gtcctgcagggccccaaggacctccagggatccctggatcaccaggcacctctctggagg atgtctctgcctacctacaaaatgtgggatactcttccctttctggagtccgaggtccac ctggtcctcctggccctccaggaccaccaggcttctcaggaactggcctcctgtcctatg ctgacatcgcccacaacgatgagttcaggagtgagctgatccagtacctgaagagtcagg aagtccagagctacatctcagggccccctgggccccctgggccaccaggaccaccaggac ccaaaggagatagtggcttggtgtctgggtctatgtcttcagcataccaagggttactga cttccgagcgccggcagggaggatctctgggtgctgagggctcccgtgggggatcactgg gcacaggcagctcatatggcagctccaggagcagcatgtcatcttaccattcctcagtgg gcagtgatggtgcttacgatgcctccatgggcagtgatggctctttcgatgggttgctaa cagaggaggaatcacacagatcagcaggttccagcagatcctacagcaactccttcactg gttccctggactacaatgagctggcactccgtgtgtcagagagcctgcagagccaaggta ttctccaggacttgatgtcttacactgcacagggacctgcaggtcccccaggccctcctg gcccccctggcatcagcaaggtctttgcagcctatggcaatgtcactgcagacctcatgg acttctttagaacatatggtgccatccaggggccacctggtgaaaagggggagaggggat atcctggacccaaaggtgaccctgggccgatgggccccccgggacggcatgggcacaggg gaccaaaaggagagaagggagagaaaggtgaacaagtgtatgttggcagaaggaaaagaa gaagtgttggagtttaa

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