Acanthisitta chloris (rifleman): 103798169
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Entry
103798169 CDS
T08456
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
achl03036
]
103798169 (CHD6)
Chromosome and associated proteins [BR:
achl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103798169 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
BRK
ResIII
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
103798169
NCBI-ProteinID:
XP_009068666
LinkDB
All DBs
Position
Unknown
AA seq
2683 aa
AA seq
DB search
LPSLKALSLSPMSAAWEHKTQDTFASSEEQDEVPHQVTVTATNTGSQCQCPKEEPNGAPQ
KRTSAQNGMQDSGGGGTGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKAKE
SKKPKEPKQREVAKKPRKPREPKAPKEPKEKKSGSEPAARARPKKSSKETPVEKKKKGKR
KNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGE
TIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKETHPGGLAFEMEEFYV
KYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRI
LEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHMER
PASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL
SEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQ
GNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALE
HKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMML
RRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMME
LRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGH
KVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDK
ASLKLGLDKAVLQDINRKGSTNGVGWLLEQVQVXXXLRKGAYGALMDEEDEGSKFCEEDI
DQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNE
KESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFR
VEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLI
TPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYK
KHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLSRRAVCPSCPLRYER
YNAMRADPALCFLEKVGMPDEKLLSAEQGVSDVAQDAAERGSVEKEESNGEKLEGLSKQE
VIPSDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDEMF
RRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVVYDQEKKIFDWTQFRAISRLEKKTDE
SLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVL
KCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYR
NYAQHKRTGLPGPETLCCLYQTNSKLYSSPLYSQVDRSCDTLENEAESQIKLETVDSTMS
QAGGSPPDTNCETFMSEVRDIISSNYDESSLPESLVCMMYDEKACHSEQSSLARDSPSCT
DVGSSIAKLSEGKLEGDEDPSSCDADAVREAPFLEGLQVGSDRMDNQNEEAEPSPSTPES
NPSQSIPAELSEALEQKGALPSPAAGLPEHGTMERVLSMGLYGPSLHDYELKVPPEQRFI
SLLQEKGMEAKSGPSQSHSEEDEEEEEDDDNSEAAADAVEGLSGPRARASCDPEANELGA
EEQSSGLPTPEDTSPEDVNGERESLGLGEPGPEGREDRGLDEEGTLQHSPGQAQSQPFSL
PTPLLGASGAEPPCAVGEAWGLGPEGQAGCPEAPHPEPQGVKQEECENRDEEEKASSSKS
QDGPEKYLEEESKSSASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRID
NICHAILKGKWPSSSQQFEAQSLLTAPAVASNAGSRNSYAESEAPDPSFNNGMLISQVQQ
EGFLSPVFAKDERKHRRPYEFELERDAKQRSLEQLAAAHVHPPIVLNGWREAAVDLSRAS
DGSPGNSSPFPLNTNMPKLGTVNALQGSLGMDLSGILQAGLIHPVTGQIVNGNLRRDDAA
MRRRRGRRKNVEGMDLIFLKERPLPTRLQDVQEDQSQPPQTSPLPDGPVAATSTPQPVPA
AGSQEKAVPNKSLLDWLRQQSDYTLDVPGFGTNFSDKPKQRRQRCKDPSKLDISSLTGEE
RVPVVHKGTGRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILT
EPVLRDTGPRRRGRRPRSELLKGPGVVTDSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGI
PLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMATTCTATA
PTALTSTTKGGTAGAEKASEEKQGSQDGKKEPLAEDKPGPSSFSNQTESAITTSSPVAFN
PFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGELANPEPE
TVSLPEKEAANSQNCAEQSPPAAAEKEQDGPAEEERQAARDAD
NT seq
8052 nt
NT seq
+upstream
nt +downstream
nt
ctgccaagcttaaaagctctgagcctctccccaatgtcggctgcctgggagcacaagaca
caggacacctttgccagcagtgaggagcaggacgaggtgccccaccaggtgacagtgacg
gccacgaacacgggcagccagtgccagtgcccgaaggaggagcccaacggggctccccag
aagcggacgagcgcccagaacgggatgcaggacagtgggggtgggggcacaggggtgaag
aagaaacggaagaaaaaggatctgggagagcaggaagggggagataaagcagctgtggag
gtgaaaccaaagaggaggagagagcctaaggaaccaaaagaacccaaaaaggcgaaggaa
tccaagaagccgaaggagcccaagcagagggaggtggccaagaagcctcggaaacctcgg
gaacccaaagcccccaaggagcctaaagagaagaagagtggctctgagcctgccgccaga
gcaagacccaagaagagcagcaaggaaactcctgtggagaagaagaagaaagggaagagg
aaaaatgaaataccagtgaacagtttggatttggatcaggatctcctgagcccgtccgta
cagagcccagaggagtctgcggagtctgctgacagccagaaacgccgctcaggacggcag
gtgaagaggaggaagtacaacgaggacttggatttcaaggtggtggatgatgatggcgag
accattgctgtgctgggagctgggcgaacctctgcgctctctgcctctactctggcctgg
caggcagaggagcctcccgaggatgatgccaatatcattgagaagatccttgcctccagg
atggtgcagaaggagactcatcctggaggcctggcgtttgagatggaggagttctacgtc
aagtacagaaacttctcctacctccactgtaagtgggcaactctggaggagctggagaag
gaccccaggatctcccagaagataaagcgcttccggaacaaacaggctcagatgaaacat
atttttacagagcctgatgaggatttgttcaacccagactatgtggaggtagatcgaatt
ctggaggtggctcacacgaaggaccctgacactggggaggaagtgactcactacctggtg
aagtggtgctcactgccctatgaggagagcacctgggagctggaggaggatgtcgaccca
gggaagattaaagagtttgaagccctccagatccctccagaaatcaagcacatggagcgc
ccggcgtccgagtcctggcagaaactggagaagtcccgggagtacaagaacagcaaccag
ctgcgggagtatcagctggagggaatgaactggctgctcttcaactggtataacaggaag
aactgcatcctggcggacgagatggggctggggaaaacaatccagtcaatcaccttcctc
tcagagatattcctgatgggcatccatggcccattcctcataattgcacctctctccacc
atcaccaactgggagagggagttccgcacctggacggagatgaacgccatcgtgtaccac
ggcagccagatcagccggcagatgatccagcagtacgagatggtgtacagggacacgcag
ggtaaccctctccctgggatcttcaagttccaggtggtaatcaccacctttgagatgatc
cttgctgactgccctgagctgaagaagatccagtggcgctgtgtggtcattgatgaggca
catcgcctgaagaacagaaactgcaaactcctggaggggctgaagctcatggccctggag
cataaggtgctgctgacagggacccccctgcagaactcagtggaggagctcttcagcctg
ctgaatttcctggagccacagcagttcccctcagagacagccttcctggaggagtttgga
gacctgaagacagaggagcaggtgaagaagctgcagtccatcctgaagcccatgatgcta
cgacggctgaaggatgatgtcgagaagaatctggcacccaagcaggagaccatcattgag
gtggagctgaccaatatccagaagaaatactaccgggccatcctggagaagaacttctcc
ttcctctccaagggtgccaaccagcacaatatgcccaacctcatcaacaccatgatggag
ctgcgcaagtgctgcaatcatccatacctcatcaacggtgcagaagagaagattctggaa
gacttccgcaaaacacacagcccggaggcgccggacttccagctgcaggcgatgatccag
gcagctgggaagctggtgctcattgataagctgctgcccaagctgatcgctggtgggcac
aaggtgctcatcttctcgcagatggtgcgctgcctcgacatcctggaagactatctcatc
cagaggcggtacacctacgagcgcatcgacgggcgagtgcgcgggaacctgcgccaggct
gccatcgaccgcttctgcaagcctgactcggatcgcttcgtcttcctgctgtgcacgcgg
gcgggcgggctgggcatcaacctcactgctgctgacacctgcatcatcttcgattccgac
tggaacccacagaacgacctgcaggctcaagctcgctgccaccgcattgggcagagcaag
gcagtgaaggtctatcgcctcatcaccaggaactcctacgagcgggagatgttcgacaag
gccagcctgaagctgggcctggataaggctgtgctgcaggacatcaaccgcaaaggcagc
accaatggggtaggttggctgctggagcaggtccaggtnnnnnnnnngctgcggaaggga
gcctatggtgcgctcatggatgaggaggacgaagggtcgaagttctgtgaggaagacatt
gatcagatcctccagcgcaggacacagaccatcacaatccagtctgaggggaagggctcc
acctttgccaaggccagctttgtagcatcaggaaacagaactgacatttccttagatgac
cccaacttctggcagaagtgggccaagatagcagagctcgatacagacgccaagaatgaa
aaggagagcctggtcattgacagaccccgggtgcggaagcaaaccaaacactacaactcc
ttcgaagaggatgagctgatggagttctccgagctggacagtgactcagacgagcgaccc
acgcgctcacggcgcttcaacgagaagacgcggcggtacctgcgcgctgagtgcttccgc
gtggagaagaacctgctcatattcggctggggccgctggaaagatatcctgacccatggg
cgtttcaagtggcacctgaatgagaaggacatggagatgatctgtcgggctttactggtc
tattgcgtcaaacactacaagggggatgagaagattaagagttttatctgggatctcatc
acaccaacgaaggatggccagaaccaggctctgcagaatcactcaggcttgtcagcaccg
gtgcccagaggcaggaaggggaagaagacaaagaaccagatgctacttcccgagataaag
aacgcggactggctcgccacctgcaaccctgaggtggtcctgcacgatgacagctacaag
aagcacctcaaacagcactgcaacaaggttctgctgcgggtgcgaatgctctactacctg
aaggctgaagtgctgggggaggctgcggataaagcctttgaggggacccctgccagggag
ctggacgtgctgctgagccgcagggctgtttgccccagctgccccctgcgttacgagcgg
tacaatgccatgcgggcggacccagcgctgtgcttcctggagaaggttggcatgcccgac
gagaagctgctctccgccgagcaaggcgtcagcgacgtggcgcaggacgctgccgaaagg
ggcagtgtggaaaaggaggagagcaatggagaaaagctggaggggctatcaaaacaggag
gtgatcccgagcgatggctccgactcagacagatcctgctggcctgtctcctctgctctc
acggccagactgcggcgacttgtcactgtctaccagcgctgcaaccgcaaggagctgcct
ccccgcgccgaaatgctggtgcctggtaaccatggctactggctgcaggatgagatgttc
cggagagcctccgagatggactcggtgaacaaagaaatgcagaaaaggtggaccaggagg
gagcaggcagatttctaccgcactgtctcctcctttggggttgtctatgaccaggagaaa
aagatctttgactggacccagttccgagccatctctcgcctggagaagaagacagatgag
agcctggagaagtacttctacagcttcgtggccatgtgcaagaatgtctgtggtctccct
ctgtggaaagaggatggtcctccagaccctgacatctacgtggagcccatcacggaggaa
cgtgctgccagaaccctgtaccgcatcgagctgctgcgcaaggtgcgcgagcaggtgctc
aagtgcccacagctccacgagcggctcaagctgtgccggcccagcctctacctgccggtc
tggtgggagtgcggcaaacacgaccgtgacctgctgatcggcaccgccaagcacggcctg
aaccgcaccgactactacatcatgaacgacccccagctgtcttttttagatgcatacagg
aactatgcccagcataaaagaacagggctcccgggcccagaaaccctgtgctgcctttac
cagactaactccaaactctacagttcccctctgtacagccaggtggaccggagctgtgac
accctggagaatgaagctgagagtcagatcaagctagaaaccgtggacagcaccatgtcc
caggctgggggcagccctccagacacaaactgtgaaacgttcatgtccgaggtccgggac
atcatctccagtaactacgacgagagctcactgccggagtcactggtgtgtatgatgtat
gatgagaaggcctgtcacagcgagcagagctccctggccagagacagtccaagctgcaca
gatgtcggaagcagcattgccaaactctccgagggcaagctggagggggatgaggatccg
tccagctgcgatgccgatgccgtgagagaggctcccttcctcgaggggttgcaggtgggc
tctgaccgaatggacaatcagaacgaggaagctgagccttcaccttctacccctgaaagc
aacccttcgcagagcatcccagccgagctcagcgaggccttggagcagaagggagccctg
cccagcccagcggcagggctgcccgagcatggcaccatggaaagggtcctcagcatgggg
ctctatggtcccagtctccatgactatgaactaaaggttcctcctgagcagaggttcatc
agtctgctgcaggagaaaggaatggaagcaaagtcggggccaagtcagagccacagcgag
gaggatgaggaggaagaagaggatgacgataactccgaggcagcagcagatgctgtggaa
ggcttgagtggtcccagggctagggccagttgtgaccctgaggctaatgaactgggggct
gaggagcagagttctggcctccccacacctgaggacactagcccagaagacgtgaatggc
gagagagagtccctggggctgggagaacctgggccagagggcagggaggaccgtggcttg
gatgaggagggcaccctgcagcactcaccaggccaggctcagagccagcccttcagcctg
cccacacctctgctgggagcttcaggggcagagcccccctgtgctgtgggggaggcctgg
ggcctagggcctgagggacaggcaggctgtccagaagccccacaccctgagccccagggg
gtgaagcaagaagagtgtgagaacagagatgaggaggaaaaagccagcagcagcaagagc
caagatggtccagagaagtacttggaggaagagagcaagagttctgcttctgtcctgccc
ggggagatcgatgaccttcaggatgcccgggcaccaaccattgcccagctgctgcaggag
aagacgctttactccttctctgagtggcctaaggaccgtgtgatcatcaaccgcattgac
aacatctgccatgccatcctgaagggcaagtggccttcctccagccagcagttcgaggcc
cagagcctgctgacagccccagctgtggccagcaacgccggcagcaggaacagctatgct
gagtcagaggctcctgatcccagcttcaacaacgggatgttaatctcacaggtacaacag
gaaggtttcctgagccctgtctttgcaaaggacgagcggaagcacaggagaccctatgaa
tttgagctggagagagatgccaagcagaggagcctggagcagctggcagcagcccatgtc
catccacccattgtgctgaacggctggcgtgaggcagcggtggacttgtcaagagcctct
gatgggtccccagggaactcctctcctttccccctgaacacgaacatgcccaaattgggg
accgtgaatgcccttcagggctccctgggcatggacttgtctgggatcctacaggcaggg
ttaatccatcctgtcacaggacagattgtaaatggcaacctccgaagagacgatgctgcc
atgaggaggagacggggcagaaggaaaaatgtcgaagggatggacctcatcttcttgaag
gagaggcctcttccaaccaggctgcaggatgttcaggaagaccagtcgcagccccctcag
accagtcccctccctgatgggccagttgctgctacctcaactccacagccagtcccagct
gcaggcagccaagagaaggctgtcccgaacaagagtctcctcgactggctccggcagcag
tctgactacacactcgatgttcccggctttggcacaaatttttcagacaagcccaagcag
aggaggcagcgctgcaaggaccccagcaaattggacattagctcactgacgggagaagag
cgggtgccggtggtacataagggtactggacggaggttagggggagccacggcaccagca
ttgaaggaattgccaaggtggcttgatgcaaacttggagtatgctgttgcagctgactgg
gctgacattgttaagctttcaggctacttacctgaaaacaagttcaatcgcatcctgacg
gagccggtgctccgggacacagggccgcgccggagggggaggaggccccgcagcgaactc
ctgaagggccccggcgttgtcacagattcttcttctggaatgggaccattgttcatgaac
ggactaattgctgggatggatctagtgggacttcagaacatgagaaacatgcaagggatc
cctctgacggggctggtggggttccctgctggctttgcagcagtgcccgccggcgaggat
gtgaagagcaccctgagcatgttgcccatgatgctgccgggcatggctaccgtaccccag
atgtttggtgttggaggactgctcaacccccccatggcaacgacttgtactgcgaccgct
ccgactgcgttaacaagcacaacgaaaggtggcacagccggcgccgagaaggccagcgag
gagaaacagggcagccaggatgggaaaaaagagcctctcgccgaagacaagcctgggcct
agttcgttttctaatcagacagaatctgcaataactaccagtagtcctgtagcttttaac
ccgtttcttatcccagggatgtctcctggactgatctatccctccatgttcctttcccct
ggcatcggcatggcgctgcctggcatccagcaaaccaggcactcggaggcggcgaacctg
gagagccagaagaggaagaggaagaaagcgaaaggggaattggcaaacccagagccagaa
actgtctcactgccggaaaaagaagctgcaaacagtcaaaactgtgcggagcagagcccg
ccagcggcggcagagaaggagcaggatggaccagcagaggaggagcgccaagcggctcgt
gatgctgattag
DBGET
integrated database retrieval system
