Acanthisitta chloris (rifleman): 103798291
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Entry
103798291 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR4-like
KO
K10691
E3 ubiquitin-protein ligase UBR4 [EC:
2.3.2.27
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
achl04121
]
103798291
Enzymes [BR:
achl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103798291
Ubiquitin system [BR:
achl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
103798291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
E3_UbLigase_R4
UBR4
Ribosomal_60s
ARM_LRRK2
Motif
Other DBs
NCBI-GeneID:
103798291
NCBI-ProteinID:
XP_009068795
LinkDB
All DBs
Position
Unknown
AA seq
2745 aa
AA seq
DB search
DCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDLSVDAL
SPTFYFLLPSSKIRDVTFLFNEEGKNIIVIMSSAGYIYTQLMEEASSAQHGPFYVTNVLE
VNHEDLKDSNGQVAGGGVSVYYSHVLQMLFFSYCQGKSFAATISRASLEVQRLFPINIKS
SNGGSKTSPALCQWSEVMNHPGLVCCVQQTTGVPLVVMVKPDTFLIQEIKTLPAKAKIQD
MVAIRHTACNEQQRTTMILLCEDGSLRIYMANVENTSYWLQPSLQPSSVISIMKPVRKRK
AAAITTRTSSQVNFPIDFFEHNQQLTDVEFGGNDLLQVYNAQQIKHRLNSTGMYVANTKP
GGFTIEVTNNNSTMVMTGMRIQIGTQAIERAPSYLEIFGRTMQLNMTRARWFDFPFTREE
ALQADKKLTIFIGASVDPAGVTMMDSIKIYGKTKEQFGWPDEPPEDFPSASVSNVCPPNL
NQGNGTGDTESAAPAAASGTVLERLVVSSLEALESCFAVGPVNEKEKNKIAAQELATVLL
SMPAPSSVQQQTKSLLASLHTSRSAYHNHQDQALLSKAIQYLTSSTKEGKDLDPEVFQRL
VITARSIAIMRPNNLVHYTESKLPQLETESEEGQEAQKHVEGEGCTFITQLVNHFWKLHA
SKPKNAFLAPACLPGLTHVEATVNALVDIIHGYCTCELDCIHTASKIYMQMLLCPDPAVS
FSCKQALIRVLRPRNKRRHVTLPSSPRSNTPMGDKDDDDDDDAEDKLQSSGIPNGEHIRQ
ESQEQSEVDHGDFEMVSESMVLETSENVNNGNPSPLEALLAGAEGFPPMLDIPPDADDET
MVELAIALSLQQDQQGSSSSALGLQSLGLSGQAPSSSSLDAGTLSDTTASAPASDDEGST
AATDGSTLRTSPAEHGGSVGSESGGSAVDSVAGEHSVSGRSSAYGDTTAEGHPAGPGSVS
SSTGAISTTTGQQEGEGSEGEGEAEGDVHTSNRLHMVRLMLLERLLQNLPQLRNVGGVRA
IPYMQVILMLTTDLDGDDEKDKGALDNLLSQLIAELGMDKKDVSKKNERSPVNEVHLVVM
RLLSVFMSRTKSGSKSSICESSSLISSATAAALLSSGAVDYCLHVLKSLLEYWKSQQNDE
EPVATSQLLKPHTTSSPPDMSPFFLRQYVKGHAADVFEAYTQLLTEMVLRLPYQIKKIAD
TNSRIPPPIFDHSWFYFLSEYLMIQQTPFVRRQVRKLLLFICGSKDKYRQLRDLHTLDSH
VRGIKKLLEEQGIFLRASVVTASSGSALQYDTLISLMEHLKACAEIATQRTVNWQKFCIK
DDSVLYFLLQVSFLVDEGVSPVLLQLLSCALCGSKVLSVASSSGSSTSSTSAPAASGSGQ
ATTQSKSSTKKSKKEEKEKEREGEGSGSQEDQLCTALVNQLNKFADKETLIQFLRCFLLE
SNSSSVRWQAHCLALHIYRLDLMWSIWPELPAYGRKAAQFVDLLGYFSLKTQQTEKKLKE
YSQKAVEILRTQNHILTNHPNSNIYNTLSGLVEFDGYYLESDPCLVCNNPEVPFCYIKLS
SIKVDTRYTTTQQVVKLIGSHTISKVTVKIGDLKRTKMVRTINLYYNNRTVQAIVELKNK
PARWHKAKKVQLTPGQTEVKIDLPLPIVASNLMIEFADFYENYQASTETLQCPRCSASVP
ANPGVCGNCGENVYQCHKCRSINYDEKDPFLCNACGFCKYARFDFMLYAKPCCAVDPIEN
EEDRKKAVTNINTLLDKADRVYHQLMGHRPQLENLLCKVNEAAPEKPQDESGSSGGISST
SASVNRYILQLAQEYCGDCKNSFDELSKIIQKVFASRKELLEYDLQQREAATKSSRTTVQ
PTFTASQYRALSVLGCGHTSSTKCYGCASAVTEHCITLLRALATNSAIRHILVSQGLIRE
LFDYNLRRGAATMREEVRQLMCLLTRDNPEATQQMNDLIIGKVSAALKGHWANPDLASSL
QYEMLLLTDSISKEDSCWELRLRCALSLFLMAVNIKTPVVVENITLMCLRILQKLIKPPA
PTSKKNKDVPVDALTTVKPYSNEIHAQAQLWLKRDPKASYEAWKKCLPARGIDANGKSPS
KAELHQLYLSEKYVWKWKQFMSRRGKRTCPLDLKLGHNNWLRQVLFTPATQAARQAACTI
VEALATIPSRKQQVLDLLTSYLDELSIAGECAAEYLALYQKLIKPAHWKVYLAARGVLPY
IGSLITKEIARLLALEEATLSTDLQQGYALKSLTGLLSSFVEVESIKRHFKSRLVGTVLN
GYLCLRKLVVQRTKLIDETQDMLLEMLEDMTTGTESETKAFMAVCIETAKRYSLDDYRTP
VFIFERLCSIIYPEENEVTEFXXXXXQEDFLQGRMPGNPYSSNEPGIGPLMRDIKNKICQ
DCDLVALLEDDSGMELLVNNKIISLDLPVAEVYKKVWCPTNEGEPMRIIYRMRGLLGDAT
EEFIESLDSTTDEEEDEEEVYKMAGVMAPCGGLECMLNRLTGIKDFKQGRHLLTVLLKLF
SYCVKVKINRQQLVKPEMNTLNVMLGTLNLALVAEQESKDSGGAAVAEQVLSIMEIILDE
SNAEPLSEDKGNLLLTGDKDQLVMLLDQINSTFVRSNLSVLQGLLRIIPYLSFGEMEKMQ
ILVDRFKPYCNFDKYDEEHSGDDKVFLDCFCKIEAGIKNNSNGHQLKDLILQKGITQNAL
DYMKKHIPSAKNLDADIWKKFLSRPALPFILRLLRGLATQHPATQ
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
gactgccacgtgttaacattcagcagctctggatcagtctctgatcatttggtacttcat
ccccagttagccactgggaatttcatcatcaaagctgtgtggctgccaggatctcaaaca
gagcttgccattgtcactgcagactttgtcaagatttatgacctctctgtagatgccttg
agtccaaccttctacttccttctaccaagttctaaaatcagggacgtcactttccttttc
aatgaggaggggaagaacatcatagtgatcatgtcctctgctgggtacatctacacacag
ctcatggaagaggccagcagtgcccagcatggacctttctatgtcaccaatgtgcttgaa
gtcaatcatgaggacctaaaggacagcaatgggcaggtggcaggaggaggagtgtcagtg
tattactcccatgtgctgcagatgttgttcttcagctactgccaaggcaaatcctttgca
gccaccatcagcagggccagcctggaagtgcagaggctattccccattaacatcaagagt
tccaacggtgggagtaagacttctccagccctgtgccagtggtctgaggtgatgaaccat
cctggcttggtgtgctgtgttcagcaaaccacaggtgtgccactggtggtgatggtgaag
ccagacaccttcctcatccaggagattaagaccttgccagccaaagcaaagattcaggac
atggtggccatccgccacacggcctgcaacgagcagcagaggaccaccatgatcctgctg
tgtgaggatggcagcctgaggatctacatggccaacgtagagaacacctcctactggctc
cagccctccctccagcccagcagtgtcatcagcatcatgaagcctgttcgcaagcgcaag
gcagctgccatcacaactcgcacatccagccaggtgaacttccctattgatttctttgag
cacaaccagcagctcacagacgtggagtttgggggcaatgacctgctgcaggtgtacaat
gctcagcagatcaagcaccgcctcaattccactggcatgtacgtggccaacacaaagcct
ggggggttcaccattgaggtgacaaacaacaacagcacgatggtgatgacagggatgcgg
atccagatcggcacacaggccatagagagagctccctcctacctggagatcttcggccgc
accatgcagctgaacatgaccagggcccgttggtttgacttccctttcactcgggaggaa
gctttgcaggctgacaaaaaactcaccatcttcattggggcttctgtggatcctgctgga
gtcacaatgatggattccatcaaaatctatggcaaaaccaaagagcagtttggatggcct
gatgagcctcctgaggatttcccatctgcctcagtgagcaacgtttgtcctccaaacctg
aaccaagggaatggcactggagacacagagtcagctgctcctgctgctgccagtgggact
gtcctggagaggctagtagtgagttctttagaagcgctggaaagctgctttgctgtagga
ccagtcaacgagaaggagaagaataagattgcagctcaggaactggctactgtgctgctg
tccatgccagctccttccagtgtccagcagcaaaccaagagcctcctggctagcctgcac
accagccgctcggcctaccacaaccaccaggatcaagcactgctaagcaaagccattcag
tacttaacctcctcaaccaaagaaggaaaggaccttgaccctgaagtattccagagattg
gtcatcactgctcgatccattgctattatgagacccaacaacctggttcactacacagaa
tcaaagctgccccagctggaaacagagagtgaagaaggccaggaggcccagaaacacgtg
gaaggagagggctgcacatttattactcagctggtgaaccacttctggaagctccatgca
tcaaaacccaaaaatgccttcctggcccctgcctgcctgccaggtctcactcatgttgaa
gccacagtcaatgctttggtggatattatccatgggtactgcacgtgtgagctggattgt
atccatacagcatccaagatctacatgcagatgctactttgcccggatcctgcagtgagc
ttttcttgcaaacaagccttgatcagagtgctgagaccacggaacaagaggagacatgtc
accttgccatcctccccccggagcaacactcctatgggagataaggatgatgatgatgac
gacgatgcagaagacaaactgcagagctctgggataccaaatggtgaacacatccgacag
gaaagtcaggagcaaagtgaagttgatcacggggactttgagatggtgtctgaatccatg
gttctggagacttctgagaatgtgaataatggcaatccttctcctctggaggctctgctg
gctggagcagagggattccctcctatgctggatatccctccagatgcagatgatgaaacc
atggtggaattggctattgcccttagcctacaacaagatcagcaagggagcagcagtagt
gcccttggactgcagagcttagggctgtctggccaagctccgagctcctcttccttggat
gctggaacactctcggatacaacagcatcagctccagcgtctgacgacgaaggcagcaca
gctgcgaccgacggctcgaccctgcggacgtctccggcagagcatggtggcagtgtgggc
tccgagagcggcggcagcgccgtggactccgtcgctggggagcacagtgtgtcaggccgc
agcagtgcctatggtgacaccacagccgagggacacccggcagggcccggcagcgtcagc
tccagcaccggcgccatcagcaccaccacgggccagcaggagggagagggctcagaaggg
gaaggagaggctgagggggatgtccacaccagcaacaggctgcacatggtccgactgatg
ctgctggagaggctgctgcaaaacttacctcagctgaggaatgtgggaggagtccgagcc
atcccctacatgcaggttattctgatgctcacaacagacctagatggagatgatgagaaa
gataagggagctttggataaccttctgtcccagctgattgcagagctgggcatggacaaa
aaggatgtatccaagaaaaacgaacgctctcctgtgaacgaagtgcacttggtggtgatg
aggctgctcagtgtcttcatgtccagaaccaagtcaggatccaagtcttccatttgtgag
tcctcctccctcatctccagtgccactgctgctgcactactgagctctggtgctgttgac
tactgtctgcacgtgctgaagtcgttgctggagtactggaagagccagcagaatgatgag
gagcctgtagccaccagccagctcctgaaacctcacacgacttcttctccccctgacatg
agcccttttttcctccgccagtatgtgaagggccatgctgcagatgtttttgaggcctac
actcagctcctgacagagatggtgctgcgcctgccctaccagatcaaaaagattgcagac
acaaactctcgtatcccacctcccatctttgaccactcctggttctactttctgtctgag
tacctgatgatccagcagacgccgttcgtgcgccgccaggtgcggaagctcctgctcttc
atctgtggctccaaggacaagtatcgccagctccgggacctgcacaccttggactcccac
gttcgtggaatcaaaaagctcctggaagagcaaggaatattccttcgtgccagcgtggtc
acagcaagctcaggctctgccctgcagtacgacactttgatttccttgatggagcatcta
aaggcctgtgcagagattgccacacagcgaacagtgaactggcagaaattctgcattaag
gatgactcggttctctacttcctccttcaagtcagcttcctggtggatgaaggagtgtca
ccagttctcctgcagctgttgtcttgtgctctgtgtggcagtaaagtgctgtctgtggct
tcatcctctggatccagcacctcttccacctctgctcctgcagcatcaggctctgggcag
gcaacaacacagagcaaatcctccacaaaaaagagcaagaaggaagaaaaggaaaaggag
cgagagggtgagggttcaggcagtcaggaggatcagctgtgcacagctctggtgaaccag
ctgaacaagtttgctgacaaggagaccctcatccagttcctgcgttgcttcctgctggaa
tccaactcctcctcagtgaggtggcaggcccactgcctggcactccacatctacaggttg
gatctcatgtggtcaatctggccagaacttccagcctatggcagaaaggctgctcagttt
gtagatctcctgggatacttctctctgaaaacacagcagactgagaaaaagctgaaggaa
tattcccaaaaggctgtggagatcctcaggacacaaaaccacattctcaccaatcacccc
aactccaacatttacaacacactgtctgggcttgtggaatttgatggctattacctggag
agtgatccttgccttgtctgcaacaatccagaggtgcccttctgttacatcaagctctcc
tccatcaaagtggacacacggtacacgactacccagcaggtggtgaagctcattggcagc
cacaccatcagcaaggtgacagtgaagataggagacctgaaacgaaccaaaatggtcaga
accatcaacctctactacaacaacaggacagtgcaggccatagtggagctgaaaaacaag
cctgctcggtggcacaaggctaaaaaagtgcagctgaccccaggccagacagaggtgaag
attgatttgccactgcccatcgtggcctccaacttgatgatcgagtttgctgacttctat
gagaactaccaggcgtccacggagaccctgcagtgccctcggtgcagcgcgtccgtcccg
gccaaccccggcgtgtgcggcaactgcggagagaacgtctaccagtgccacaagtgcaga
tctattaactatgatgagaaggatcccttcctgtgcaatgcctgtggcttctgtaaatac
gctcgcttcgacttcatgctctatgccaagccctgctgtgcagtggatcccatcgagaac
gaggaggatcgaaagaaggctgtaacaaatatcaacactctcctggacaaagctgacaga
gtgtatcaccagctgatgggacacagaccacagctggaaaaccttctgtgtaaagtgaat
gaggcagcacctgaaaagccacaggatgaatctggtagcagtggagggataagttctacc
tcagcaagtgtgaataggtacatactacagttagcccaggagtattgtggtgactgcaag
aactcctttgatgagctttccaaaatcatccagaaagtctttgcctctcggaaggaactc
ctggaatatgatctccagcagagagaagcagcaacaaagtcatcccgaaccaccgtccag
cccacgtttaccgccagccagtaccgtgccttgtccgttctgggctgtggccacacctca
tccacgaaatgctatggctgtgcctcagctgtcactgagcactgcataaccttgctcagg
gctttggccaccaactctgccatcaggcacatcctggtgtcccagggcctcatccgggag
ctcttcgactacaacctgcgccgaggcgcagccaccatgagggaggaggttcggcagctc
atgtgccttctgaccagggacaacccggaggccacacagcaaatgaatgacttaatcatt
gggaaggtttctgcagctctgaagggacactgggcaaatccagacttggctagcagcctc
cagtatgaaatgctgctgctaacagattccatctccaaggaagacagttgctgggagctg
cgactgcgctgtgctctcagcctcttcctgatggcagtgaacatcaagactccagtggtc
gttgaaaacatcaccctcatgtgcctgcgcattcttcagaagctgatcaagccacctgct
cctaccagcaagaaaaacaaggatgtgcctgtggatgctctcaccactgtgaagccttac
agcaatgaaatccatgcacaagctcagctgtggctcaagagagaccccaaagcatcatat
gaagcttggaaaaagtgcctccctgccagaggtatagatgccaatgggaaatctcccagc
aaagctgagctccaccagctctacttgtcagaaaaatatgtctggaaatggaagcagttc
atgagtcgccgtgggaagagaacttgtcctctggacctcaagctgggacacaacaactgg
ctgcgacaggtgctgttcactcctgccacccaggctgccaggcaggctgcctgcaccatc
gtggaggctctggccaccatccccagccgaaagcagcaggtccttgacctcctgaccagc
tacctggatgagctgagcattgctggtgagtgtgctgcagagtacctggccctgtaccag
aaactcatcaaacctgcccactggaaggtctacctggcagccagaggggttctgccctat
attggtagcctcatcactaaggaaatagctcgtttacttgccttggaggaagcaacactc
agcactgatttgcagcagggatatgccttgaagagtctcacaggtcttctctcttccttc
gtggaggtggagtccatcaaacggcacttcaagagtcgcctggtggggacagtcctcaac
gggtacctgtgcctgaggaagttagtggtgcagagaacaaagctcattgatgaaactcag
gacatgctgctggagatgctggaggatatgacaacaggcacagagtctgaaaccaaagca
tttatggcagtgtgtatagagactgcaaagcgttacagcctcgacgactacaggactcca
gtgttcatctttgagagactctgcagcatcatctaccctgaagagaatgaagtcactgag
ttcnnnnnnnnnnnnnnncaggaagacttcttacagggcagaatgccaggaaatccctac
agcagcaatgagcctggaattggaccactcatgagggacatcaagaacaaaatctgccag
gactgtgacctggtggctctgctggaggatgacagtggcatggagctgttggtgaacaat
aagatcatcagtttggatctgcctgtggctgaggtctacaagaaggtgtggtgtcccact
aatgagggggagcccatgaggatcatttaccgcatgcgagggttactgggagatgccact
gaggaattcatcgagtctctcgactccacgactgatgaagaggaggatgaggaagaagtt
tataagatggcaggtgtcatggccccgtgtggaggcctggagtgcatgctcaacagactg
actggcatcaaggacttcaaacaaggccgacacctcttaactgtgctattaaaactcttt
agttactgtgtgaaggtgaaaataaatcgtcagcagttggtcaagccagagatgaacact
ttgaatgtcatgctgggaactcttaacttggctctggtggctgagcaggagagtaaggac
agtggaggagcagctgtggcagagcaagtgctcagtataatggagatcatcctggatgaa
tccaacgcagaacctctgagcgaggacaagggcaacctgctcctcacaggtgacaaagac
cagctggtaatgttgcttgaccagataaacagcacttttgtccgttccaacctcagtgtc
ctgcaaggccttttacgcatcatcccatacctgtcctttggggagatggagaaaatgcag
atcctggtggatagattcaagccctactgtaactttgataagtatgatgaggaacacagt
ggagatgataaagttttcctagactgcttctgtaaaatagaagcaggaataaagaacaac
agcaatggccatcagctgaaggatctcatcctgcagaaggggattacacagaatgccttg
gattacatgaaaaaacacattcctagtgcaaagaatttggatgcagacatatggaagaaa
ttcctctctcgacctgcacttcctttcatcctgcgcctgctccgaggacttgccacacag
caccctgcaacacag
DBGET
integrated database retrieval system
