Acanthisitta chloris (rifleman): 103798386
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Entry
103798386 CDS
T08456
Symbol
CIRH1A
Name
(RefSeq) cirhin
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103798386 (CIRH1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achl03009
]
103798386 (CIRH1A)
Ribosome biogenesis [BR:
achl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103798386 (CIRH1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
103798386
NCBI-ProteinID:
XP_009068890
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
QIGCEDGSVKIFRVVPEGIQFERSLDRRKGRVLCLSWQPSDAGIAAGSIDMFRVIDVASG
QTVQRVMVNHHAEKVKRECIVWAIAFLSSGTVVTADSFGRVQFWDWEQGTLAESHTVSTS
AALSLAVSEKEDSIVVGTSTGATYQLQLLPVKLGSAEKHWVRTKPFQFHSHDVRAVAHSP
TALISGGLDAQLVIRPLMEKVQKKGYESVLRKFTFPHRRLVSCARKARLLLFQFSQHLEL
WRLGSTEETGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGVHCNGDSVSLKRVPK
VPQLVPPAYQLQFSADSESLFVASAQGSVHVLQLLEPEGCKHLHTLQPPSGCSEAVYLLA
SSTDGQWLAAVGGDWVIHVYNLKCFKHHCVVPMYSCAVTAIAIHPSTNNLVIAYSDQQLL
EFSIPHRQYTAWSRSVQSCGLHRAWLERDSPITHITFNPKNPSHILLHDLYLFCVLDKSL
PLPDDSSLLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFVDLLDDNCLVVVERPIMDF
KTELPLPVQQKKFGT
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
cagatcggctgtgaggatggctccgttaagatcttccgggtcgtgcctgaggggatccag
ttcgagcggagcctggacaggcggaaaggccgtgtcctgtgcctgtcttggcagccctcg
gacgctggcattgcggccggatccattgacatgttccgtgtgatcgacgttgcttcaggc
cagacggtgcagagggtcatggtgaaccaccacgcggagaaggtgaagcgcgagtgcatc
gtgtgggccatcgccttcctctccagcggcaccgtggtcactgccgattctttcgggagg
gtgcagttctgggactgggagcaaggcaccctggcagagtcccacactgtcagcacctct
gctgcactctcactggctgtgtcagagaaagaggacagcatcgtcgtgggcacctcaact
ggagccacgtaccagttgcagctgctgccagtgaagctgggcagtgcggagaagcactgg
gtgcggacgaagcccttccagttccacagccacgacgtgcgggcggtggcacacagcccc
accgccctcatctctgggggcctggatgcccagctggtgatccgcccactgatggagaag
gtgcagaagaagggctacgagtcagtgctgcgaaaattcaccttcccccacagacgcctc
gtctcctgcgccaggaaagctcggctgctcctcttccagttctcccagcacctggagctc
tggagacttggctccactgaagagactggaaaggacggcgaggtccttcccttgtgtcgc
atgcccgagcacctcgtgcagctcaagagcaagggaccggagcacatctactgcagctgt
gtctcgccctgcggcgtgcactgcaacggggacagtgtcagcctcaagagggtccccaaa
gtgccccagctggtgcctccagcctatcagctccagttctctgctgactccgagagcctc
tttgtcgcctctgctcaaggatctgtccatgtcctccagctgctggagccagagggctgc
aaacacctgcacacgctccagccaccctcagggtgctccgaggctgtttacctgctggcg
tcgagcacggacgggcagtggttggcagctgttggtggggactgggtcatccacgtctac
aacctgaaatgcttcaagcatcactgcgtggtgcccatgtacagctgtgcagtgacagca
attgccatccaccccagcaccaacaaccttgtcatcgcctactcagaccaacagctgttg
gagttcagcatcccccacaggcagtacacagcctggagccgctcagtgcagagctgtggg
ctgcaccgtgcctggctggagcgggactcgcccatcacccacatcaccttcaaccccaag
aacccctcacacatcctcctccatgacctctacttgttctgcgtcctcgacaagtccctg
cccctgcctgatgacagctctctcctgatgaaccagagcaccctgaagcagctcccagag
acagccaggaagcggcagctccacgccttcaagatctgcaagaagttccagcctctgctc
tttgtggatctgctggatgacaactgcctggtcgtggtggaacgacccatcatggacttc
aaaactgaactgcctctgcctgtgcaacagaagaaatttggcacctga
DBGET
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