KEGG   Acanthisitta chloris (rifleman): 103798386
Entry
103798386         CDS       T08456                                 
Symbol
CIRH1A
Name
(RefSeq) cirhin
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:achl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103798386 (CIRH1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:achl03009]
    103798386 (CIRH1A)
Ribosome biogenesis [BR:achl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103798386 (CIRH1A)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 WD40 WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_NUP159_NUP214 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 103798386
NCBI-ProteinID: XP_009068890
LinkDB
Position
Unknown
AA seq 555 aa
QIGCEDGSVKIFRVVPEGIQFERSLDRRKGRVLCLSWQPSDAGIAAGSIDMFRVIDVASG
QTVQRVMVNHHAEKVKRECIVWAIAFLSSGTVVTADSFGRVQFWDWEQGTLAESHTVSTS
AALSLAVSEKEDSIVVGTSTGATYQLQLLPVKLGSAEKHWVRTKPFQFHSHDVRAVAHSP
TALISGGLDAQLVIRPLMEKVQKKGYESVLRKFTFPHRRLVSCARKARLLLFQFSQHLEL
WRLGSTEETGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGVHCNGDSVSLKRVPK
VPQLVPPAYQLQFSADSESLFVASAQGSVHVLQLLEPEGCKHLHTLQPPSGCSEAVYLLA
SSTDGQWLAAVGGDWVIHVYNLKCFKHHCVVPMYSCAVTAIAIHPSTNNLVIAYSDQQLL
EFSIPHRQYTAWSRSVQSCGLHRAWLERDSPITHITFNPKNPSHILLHDLYLFCVLDKSL
PLPDDSSLLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFVDLLDDNCLVVVERPIMDF
KTELPLPVQQKKFGT
NT seq 1668 nt   +upstreamnt  +downstreamnt
cagatcggctgtgaggatggctccgttaagatcttccgggtcgtgcctgaggggatccag
ttcgagcggagcctggacaggcggaaaggccgtgtcctgtgcctgtcttggcagccctcg
gacgctggcattgcggccggatccattgacatgttccgtgtgatcgacgttgcttcaggc
cagacggtgcagagggtcatggtgaaccaccacgcggagaaggtgaagcgcgagtgcatc
gtgtgggccatcgccttcctctccagcggcaccgtggtcactgccgattctttcgggagg
gtgcagttctgggactgggagcaaggcaccctggcagagtcccacactgtcagcacctct
gctgcactctcactggctgtgtcagagaaagaggacagcatcgtcgtgggcacctcaact
ggagccacgtaccagttgcagctgctgccagtgaagctgggcagtgcggagaagcactgg
gtgcggacgaagcccttccagttccacagccacgacgtgcgggcggtggcacacagcccc
accgccctcatctctgggggcctggatgcccagctggtgatccgcccactgatggagaag
gtgcagaagaagggctacgagtcagtgctgcgaaaattcaccttcccccacagacgcctc
gtctcctgcgccaggaaagctcggctgctcctcttccagttctcccagcacctggagctc
tggagacttggctccactgaagagactggaaaggacggcgaggtccttcccttgtgtcgc
atgcccgagcacctcgtgcagctcaagagcaagggaccggagcacatctactgcagctgt
gtctcgccctgcggcgtgcactgcaacggggacagtgtcagcctcaagagggtccccaaa
gtgccccagctggtgcctccagcctatcagctccagttctctgctgactccgagagcctc
tttgtcgcctctgctcaaggatctgtccatgtcctccagctgctggagccagagggctgc
aaacacctgcacacgctccagccaccctcagggtgctccgaggctgtttacctgctggcg
tcgagcacggacgggcagtggttggcagctgttggtggggactgggtcatccacgtctac
aacctgaaatgcttcaagcatcactgcgtggtgcccatgtacagctgtgcagtgacagca
attgccatccaccccagcaccaacaaccttgtcatcgcctactcagaccaacagctgttg
gagttcagcatcccccacaggcagtacacagcctggagccgctcagtgcagagctgtggg
ctgcaccgtgcctggctggagcgggactcgcccatcacccacatcaccttcaaccccaag
aacccctcacacatcctcctccatgacctctacttgttctgcgtcctcgacaagtccctg
cccctgcctgatgacagctctctcctgatgaaccagagcaccctgaagcagctcccagag
acagccaggaagcggcagctccacgccttcaagatctgcaagaagttccagcctctgctc
tttgtggatctgctggatgacaactgcctggtcgtggtggaacgacccatcatggacttc
aaaactgaactgcctctgcctgtgcaacagaagaaatttggcacctga

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