Acanthisitta chloris (rifleman): 103798908
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Entry
103798908 CDS
T08456
Symbol
TTC28
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
achl03037
]
103798908 (TTC28)
Cilium and associated proteins [BR:
achl03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
103798908 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TTC28_C
TPR_2
TPR_10
TPR_MalT
TPR_6
RPN7
Rapsyn_N
TPR_14
TPR_NPHP3
TPR_16
TPR_19
TPR_9
ANAPC5
Motif
Other DBs
NCBI-GeneID:
103798908
NCBI-ProteinID:
XP_009069439
LinkDB
All DBs
Position
Unknown
AA seq
2363 aa
AA seq
DB search
MTRGASVMVWPGSHQRTAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAA
MKSPMRESLEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSL
KLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKSLGLQRGECRAHGNLGSAFFSKGSY
REALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDE
LSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNF
DKAMSYHNYVLELAQELSEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDR
AAEGRASSNLGIIHQMKGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMF
DQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDI
QSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNY
EEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALMDFSKAEECQKYLLSLAQSLNNS
QAKFRALGNLGDIFVCKKDVLGAIKFYEQQLSLAHHVKDRRLEATAYAALGSAYRMVQKC
DKALGYHTQELEVYQELGDMPGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDP
SIEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEAL
GDFEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHEL
GEAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQM
GEYETALQYHQLDLQIAEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQM
NDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWAS
GNLEESQHQLYRASALFETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALA
VAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQVLETVNGQRGLVLYYSLAAGYLYSWL
LAPGAGILKFHEYYLGDSLTENAGDFHEANSVTLQTLTNSALEQHICSVREALGVDSYYT
RACASSETESEAGDIMDQQFEEMNNKLNSMTDPTGFXRNNLLNRSCQSMTSLFSSTMSPV
KDGTSSLPRRQSSFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLILVLEGELYLIPF
ALLKGSSSNEYLYERFSLIAVPSIQSLNPSSKSHVRKNTPAYSNSTSMAAVIGNPKLPSA
VMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSASTKERVMSALTQAECVHFATHVSWKLA
ALVLTPNTDSNPANSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDL
RLPVKLVVLGSYQESNSKVTADGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHAFYS
SLLNGMKASAALGEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEILQH
PERARDALRVLLHLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQAXXXXRLAPPAS
GLPAAVFFPTADPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINRAVKNVV
GMLHQVLVQLQAGEKEQDFSSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILK
TGKQATRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFS
PTCPDSIASDAISVYSLSSIASSMSFVSKPESMLDGVGPRGRQEYERPKNIYPHRSAAQS
QLSPQASTAASKDEEEYEGFSIISNEPLASYPENIKPTFSPDHKQPQTGQTGGIKDSVNP
KGSISTPNSPVKMTLVPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDTNPKLDP
QELAQKILEETQSHLIAVERLQRSSSQLSKSNSSDEGAAAPGGASAFRASETSAFSRPVS
SSQRSQSSPLAFKPKPPTRSSSLQKVSSGYNSPTVSEMSNREGTGPCSGQPSPGCDSHGS
LTEQPPFKLKYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADA
PDIDKLKLAAIDEKVQAIHNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSP
RHSKEESAEKLELKDLSIEQHLAASPHKIPPNGHRCPETSSAVAPARSPPPSSVPGAVRP
LRLPAGNGYKFLSPGRFFPSSKC
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaggagccagtgtgatggtgtggcctggcagccaccagcgcacggcatacttc
cgacagggggtggccctgcagtacctgggacgccatgcggacgctctggccgcgtttgcg
tcggggctggcgcaggatcccaagagccttcagctgctggtcggcatggtcgaggctgcc
atgaagtctcccatgcgagagtccctggagcccacctaccaacaactgcagaagatgaag
ttggacaagagccccttcgttgtggtgtctgtgattggccaggagctcctgactgcaggc
caccacggggcctctgtggtggtgctagaggctgccctgaagattggcacttgcagcctg
aagctgcggggctcagtgttctctgcgctgagcagtgcgtactggtcccttgggaacaca
gagaagagcactggatacatgcagcaggacttggacgtggccaagagcttaggcctgcaa
agaggggagtgccgagctcatggaaatctgggctctgcattcttctctaaaggaagttac
cgggaggccctcactaaccacagacaccagctagtgctcgccatgaagctcaaggacaga
gaggcagcatcctcagcactgagcagcctgggccacgtgtacacagccatcggggactac
ccaaacgctctggccagccacaagcagtgtgtgctccttgccaagcagtccaaggatgag
ctgtctgaggcacgggagctgggcaacatgggagccgtgtacatcgccatgggcgacttc
gagaacgcggtgcagtgccacgagcagcacctgaagattgcaaaggagctggggaacaag
cgtgaggaggctcgagcctacagcaacctgggcagcgcgtaccactaccgcaggaacttc
gacaaagccatgtcctaccacaactacgtgctggagctggcccaggagctgtctgagaag
gccattgagatgagagcttatgctggcctgggccatgcagctaggtgtatgcaggacctg
gagagggctaagcagtaccacgaagagcagttgcacatcgctgagagcctgcaggaccga
gctgctgaaggcagagcctcctccaatctggggatcattcaccagatgaaaggtgactac
gacactgctctgcggctgcacaagacccacctgtccatagcgcaggagctgagcgactac
gcggcgcagggcagagcctacggcaacatgggcaacgcttacaacgccctgggcatgttc
gaccaggctgtcaagtaccatcggcaggagctgcagatctccatggaggttaacgaccgt
gcgtctcaggcatccactcacggcaacctggcggttgcctatcaagctctgggggcccat
gaccgtgctctgcagcactaccaaaaccacctgaacattgcgcgggagctgcgggacatc
cagagcgaggcacgggccctcagcaacctgggcaacttccactgctcgcgcggcgagtac
gtgcaggcagccccgtactacgagcagtacctgcgcctgtccccggagctgcaggacatg
gaaggggaggggaaggtttgccacaaccttggctatgcccattactgcctggggaactac
gaggaagctgttaagtactatgagcaggatcttgctttggcaaaggatcttcatgacaag
ctgagccaagccaaagcctattgcaacctgggcctggccttcaaagccttgatggacttc
agcaaagcagaggagtgtcaaaagtacctgttgtccctggcacagtctctgaacaattcc
caggccaaattccgagctctggggaacttgggggatatttttgtctgtaaaaaagacgta
cttggtgcaataaaattttacgagcagcagttgagcttagcccatcatgttaaagacagg
agactggaagccactgcctatgcagccttgggctctgcatacaggatggtacagaagtgt
gacaaggctttaggttaccacacgcaggagctggaggtgtaccaggagctgggggatatg
ccgggtgagtgcagagcacatgggcaccttgcagccgtgtacatgtcacttgggaagtac
accatggccttcaagtgctacgaggaacagctggagctgggacagaagctgaaggatccc
agcatcgaagcccaagtgtatggtaacatgggcattaccaagatgaacatgaatgtcatg
gaggaagcaattggctactttgaacagcagctggccatgctgcagcagctcagcgggaac
gagtccgtgttagaccggggccgagcctatgggaacctgggagattgttacgaggctctg
ggagattttgaggaggctataaagtattatgaacagtacctgtctgtggctcaaagcttg
aaccgtatgcaagatcaggcaaaggcctaccgaggcttgggcagtgggcacagggctatg
ggaagtttgcagcaggctctggtgtgctttgagaagaggctcgtagtggcacatgagctg
ggggaggcatttaacaaagcccaggcctacggggagctgggcagcctgcacagccagctg
gggaactacgagcaagccatctcctgcctggagcggcagctgaacatcgctcgggagatg
aaggaccgagccctggagagcgacgctgcctgtggccttggcggggtctaccagcagatg
ggcgagtacgagacagccctgcagtaccaccagctggacctgcagattgctgaggagacc
aacaaccctgcgggccagggccgtgcctacggcaacctgggcctgacctacgagtccttg
ggcacctacgagcgggcagtggtttaccaggagcagcacctcagcattgcagcacaaatg
aacgaccttgtagccaaaacagtgtcttacagcagcctggggaggactcatcacgcttta
cagaactactctcaggctgtgatgtacctgcaggaaggactgaggctggcagagcagctg
ggacgcagagaagatgaagccaaaatccgtcacggccttggcctctccctctgggcaagt
gggaacctggaggagtcccagcaccagctgtacagggcctcggcactgtttgaaaccatc
cggcacgaggtgcagctgagcacagattacaaactgtcactcttcgacctgcagacatcc
tcctatcaggccctgcagcgagtgcttgtcagtctgggtcaccatgatgaggcattggca
gtggcagagcgaggacgaacgagggcatttgctgacctgctcgtggaacgtcagactggg
cagcaggactcagatccctattctccagtgaccatcgaccaggtcctggagactgtgaat
ggccagaggggacttgttctctactactcactggctgcaggttatctgtacagctggctg
ctggctcctggggcaggaattctgaagttccatgagtattacctgggtgacagcctgaca
gaaaatgctggggacttccatgaagccaacagtgtgaccctgcagacgctgaccaactct
gcgctggagcagcacatctgcagcgtgcgggaggccctgggagtggattcctactacacc
agagcctgtgccagcagtgagacagagagtgaagctggggatatcatggaccagcagttt
gaggagatgaataacaagctgaactcaatgactgatccaactggcttcngcaggaacaac
ctgttgaacaggagctgtcagagcatgaccagcctgttcagcagtaccatgtctcctgtt
aaggatggaacatcatcacttccgaggaggcagagttccttcaccaaacccccactccgt
gcactctacgacttactcataggacccatggaaggaggtttgatgcattccagtgggccc
gttggccgccaccgccagctgatcctggttctggagggagaactgtacctcattcctttt
gctctgctgaagggcagttcctccaacgagtacctctacgagcgcttcagcctcattgca
gtgccgtccatccagtcgctgaaccccagctccaagtcccatgtgaggaagaatactcct
gcttactccaattctacctcaatggcagctgtcataggaaatcccaagctcccttcagca
gttatggacaggtggctgtggggacctatgccctctgcagaagaggaagcatatatggta
tctgagttacttggctgccagcccttagttggcagtgcatcaacaaaagagagggtcatg
agtgccctgactcaggcagaatgtgtccactttgcaacccacgtctcctggaaactggct
gctctggtcctgacacccaacacggacagcaatccagccaacagcaagagttcttttggg
aacccctacacaatcccagaatctcttcggatgcaggacgacgccagtgatgtggagagc
atctcggactgtcctcctctccaggagttcctgctcacggccgctgatgtcctggatctg
cgccttcctgtcaagctggtggttcttggctcttaccaggagtccaacagcaaagtcact
gctgatggagttattggcttgacaagagcattcctggctgctggggctcagtgtgtcctc
gtgtcactctggcccattcctgtggctgcttccaaaatgtttgtgcatgccttctattcc
tctctcttaaacgggatgaaagccagtgcagcccttggagaagcgatgaagactgtgcag
agcagcaagcagttctcccatccagccaactgggcaggcttcatgcttattgggagtgat
atgaagctgaacagcccttcttcactggtgggacaggccctgactgagatcctgcagcac
cctgaaagggcccgggatgctctgcgtgtcctgctccatctggtggagaaatctttgcag
cgaatccagaatgggcagcacaactccatgtacacttcccagcagagcgtggagaataaa
gttggtggcattccaggctggcaggctnnnnnnnnnnnccggctggccccgccggccagt
ggcctcccagcagcagtgttcttcccaactgcagaccctggggacaggctgcagcagtgc
agcaccaccatccagtcactcctaggtttgcctaaccctgcacttcaggcactttgtaaa
cttatcacagcttcagaaacaggagaacagcttatcaacagggctgttaaaaatgtggtg
ggaatgctgcatcaagtcctggttcaacttcaggcaggtgagaaggagcaagatttctcc
tctgcaccaatccaggtctccatcagtgtccagctctggaggctgcctggctgtcatgag
ttcctggcagctctaggttttgacctttgtgaagttggccaagaggaggtgattctgaaa
actgggaaacaagctaccaggaggaccatgcactttgctctacaatccttgctggcactt
tttgattctacagagctgcccaagcgtcttagcctggacagttcctcatcactggagtca
ctggcttctgcccagtctgtttccaaccctgtaccccagtatcaaaaccctccattctct
cccacctgcccagacagcattgcctcagatgccatttctgtgtacagcctgagctccatt
gcttcttccatgagctttgtttccaagccagagagcatgctggatggtgtgggacccaga
ggacgccaggagtatgagaggcccaagaacatctatccacacaggtctgcagctcagagc
cagctgtcaccacaagccagcactgcagccagcaaagatgaggaagagtatgaaggtttc
tctataatcagcaatgagcctttggccagttacccagaaaacataaaaccaacattttcc
cccgatcacaaacagccccaaactggtcagactggaggcattaaagattctgtcaacccc
aaagggagcataagtactccaaattctcctgtcaaaatgactctcgtccccagtccaaat
tctcccttccagaaagttgggaaacttgcaagttccgatactggggaatctgaccagtcc
agcactgagactgacagcactgtcaaatcccaggaggacactaacccaaagcttgatcca
caagagttggcccaaaaaattctggaggagactcagagccacctgatagctgttgaacgg
ctccagaggagcagcagccaactgagcaagagcaacagctcggacgaaggagctgcagcc
ccgggcggtgcctccgccttccgcgcctcggagaccagcgccttcagccgccccgtcagc
tccagccagaggagccagtcctcaccccttgcctttaaaccaaagcctccaaccaggagc
tcatccctgcagaaggtgagctctggctacaacagccccaccgtgtcagagatgtccaac
agagaaggcacaggcccgtgcagcgggcagccgtcgccaggctgtgattcacatgggtcc
ctcacggagcagcctccctttaaactcaaataccccagctctccctacagtgctcatatt
tctaaatcacctaggaatatctctccaagctcaggacatcagtctcctggtggcagcact
ccatctcctgctctttcttactcctcagctggttctgctcgctcgagtccagctgatgcc
ccagacatagacaaactaaaactggctgccatcgatgagaaagtgcaagcaattcacaac
ttaaagatgttctggcagagcactccccaccactccactggcccgataaagattctccgg
ggagctcctggaacaatgacttctaagaaggatgtcctcagcttgctcaacttatcccca
cggcacagcaaagaagaaagcgcagagaagctggagctgaaggacctgtctattgagcaa
caccttgctgcttcaccacacaagatccctccaaacggacacaggtgccctgagaccagc
agtgcagtggcaccagctcgttcccctcctcccagcagtgtgccaggagctgtgcgtccc
ctccggctgccagctgggaatggctacaagttcttgtctccaggaagattttttccttcc
tccaagtgttga
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integrated database retrieval system
