Acanthisitta chloris (rifleman): 103799053
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Entry
103799053 CDS
T08456
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achl03016
]
103799053 (TARBP1)
03036 Chromosome and associated proteins [BR:
achl03036
]
103799053 (TARBP1)
Enzymes [BR:
achl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
103799053 (TARBP1)
Transfer RNA biogenesis [BR:
achl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103799053 (TARBP1)
Chromosome and associated proteins [BR:
achl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103799053 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
Cut8
Motif
Other DBs
NCBI-GeneID:
103799053
NCBI-ProteinID:
XP_009069592
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
METLEGNQIHVIKPVLPKLNSLYEHALSGDKGCWLFHPSWHMCIYKRMFESENKTLTKEG
ILHFLQLYETKHLPNSLGFLEFVIGPLMDALSESSLYSRTSGQLMGACPPLGMRLQKFLA
TYLTLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALAYIPPCKVLGAEGIHALRDVL
QCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLPEVSSFLLSLRPEESLRRDTMLWTEL
CSWLEVNDRCFRKSVTSDSEHGETSSLCQYVRSLVGEYLKTSASEGENCLMPDWFEAKLV
ATMILLAADVEQMRNKCSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQLL
LKLLQTRSLKCSNTQDDGVLFFIWKSLTTPFESILEFVLRRLTANELSTVADLDRCDLYL
ALIPEMVNLCLEVSWNKVLSIKNFIVLLTNASIRNLQQRNSEEEPELKEQIRKASSMASL
RAVCELMDQKPEAHLESLPSVGALKKFISFSQFNEVLKKPSYVEEKSSLCEETTSQGWGK
IVACYIHDQWVCLRFILNSFPMLAQEYEETSEMSLSTVERSKTILQSALEALTILPSDQV
LPVFDCMKILVPKLLDSSESLCIEAFDLAWKIISSLSNTQVIFWSNLKAFVQFIFDAEVL
AVAASAKGQAYARIKAIIFKLIDLSTTKTGVFNVVLSHCCQSWIFPNADGRSALKNAFLN
AGNYCELITEACVFGTVFRRDQRLIQDVHAFVESLGEKCAANVVTESTNRDDHYVRVCAI
KFLCLLDGSNSLHKTFMEDIFIKLLDKDEMVSRSRTRYYANSLQHRIKNRVWQTLLVLLP
KLNQNFLCGTLDKVFQAGFGNNQASVKYFIEWIVILSLHKYPQFLNKFWDCFCYDEEKLK
TSICTFLSVLSHFDIILQNTSEKKPALKKALIVVLQWCFNHNFSVRLYALVALKKIWGMC
RMLHVEELEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFAMFHPLEDYSLETIFY
TLPRLSELAEDEWISLSKFDRFTDIPLPPAFQWYHSRTELRDLKPSDWSQQDMGSHSAET
DSQTEWTDVQKKIIPWKNSTPSLDLEMAFQDRAAKLGKSNSRLIVVASLIDKPTNLGGLC
RTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTII
GVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSG
ALLIWEYTRQQVIKQKQQN
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttggaagggaaccagatccatgtcataaagccagtattaccaaaacttaac
agtttatacgagcatgctctatcaggggacaaaggttgttggctgtttcacccatcatgg
catatgtgcatttataaacgaatgtttgagagtgagaataaaaccctgacaaaggaaggc
attcttcattttctgcagctttatgaaacaaagcatcttccgaattctcttggttttttg
gagtttgttattggaccattaatggatgccctgtcagaaagttccctctacagcaggaca
tcaggtcagttaatgggagcctgtcctcctttgggaatgaggctacagaagtttttggct
acttatctcacacttcttccagaagaagaaaaaggtagtttcctgttaaagtttattcag
aagatgacaagtaggcattggtgtgctgttcccattttgtttctttctatggctctggca
tacatccctccatgtaaagtacttggtgctgaaggaattcatgctttaagagatgtcctc
cagtgtactatgattacacatcagattttgttgcgtggagctgctcagtgctatcttctt
caaacagcgatgcatttgacagatgtggagaaagtgtccctcccggaagtttcaagcttt
ctactgtccctgagaccagaggagtccctaaggagagatactatgttatggacagagctt
tgcagttggttggaagtgaatgacagatgcttcagaaagtctgtaacctctgattctgaa
catggagagacatcatcattatgtcaatatgtacgcagtcttgtgggagagtaccttaag
acatcagcgtctgagggagaaaattgcttaatgcctgactggtttgaagctaagcttgtc
gcaacaatgattctgttggcggctgatgtggagcagatgaggaataaatgcagtggaaaa
agcaacatagaatggattgaactagaggctttcttgaaccctcttctggatgtcttgatg
aaacttggcagtaatgcttacataccaacactgaaaacagataaaagcctacagcttctc
ttgaagttattgcagacccgttcgttaaaatgttccaatacgcaagatgatggggtattg
ttttttatctggaagtctctcacgacaccttttgagagtattcttgaatttgttctccga
cgacttactgcaaatgagttgagcactgttgctgatctggatcgctgtgacctgtactta
gctttaattccagagatggtgaatctgtgcttggaagtcagctggaacaaagtgctatct
atcaagaatttcattgtgttgctgacaaatgcatctattcgcaatcttcagcagaggaat
tctgaagaggagccagagcttaaagaacagattagaaaagcatctagcatggcttcactt
agagcagtatgtgagctaatggatcagaagccggaagcacacctggaatctctgccttct
gtgggtgctctgaagaaatttatttccttttctcagttcaatgaagtgttaaagaagcca
tcttatgttgaagaaaaaagtagcttatgtgaagaaacaacgtctcaaggatggggaaaa
attgtcgcgtgctatattcacgaccagtgggtttgccttcgtttcattttgaattcgttt
ccaatgctggctcaagagtatgaagaaacttcagaaatgtcattatccacagttgaaagg
tcaaaaacaattctacagtctgcattagaagcactaactattcttccttcagaccaagtt
ttacctgtgttcgactgtatgaaaatccttgttcccaagcttctggactcatcagagtct
ctctgcatagaagcatttgatttggcttggaaaattatatcctctttgagcaacacacaa
gtaatattttggtccaatctaaaagcttttgttcagttcatctttgatgctgaggttcta
gctgttgctgcaagtgcaaagggtcaagcatatgccagaataaaagcgataattttcaag
ctcatcgatctgtccactacaaagactggagtcttcaatgtggtccttagtcactgttgt
caatcttggatatttcccaatgctgatgggagaagtgccttgaaaaatgctttcttaaat
gctggaaattattgtgaacttatcactgaggcttgtgtctttggaactgtatttaggaga
gatcaaagacttattcaagatgtgcatgccttcgtagaaagtcttggagaaaaatgtgca
gcaaatgttgttacagaaagtacaaatcgagatgatcactatgttcgggtttgtgctatt
aaattcctgtgcttgttggatggatcaaattccttgcataagacctttatggaagacatt
ttcatcaagctactggataaagatgaaatggtatccagatctagaacacgctattatgca
aactctttgcagcatagaattaaaaaccgagtatggcagacactcttagttcttcttcca
aagcttaaccagaactttttgtgtggaacccttgacaaagtttttcaggctggattcggt
aacaatcaggcatctgtgaaatacttcatagaatggattgttatcttgagtctacataaa
tacccccaattccttaataaattctgggattgcttttgctatgatgaagaaaagcttaaa
acaagcatctgcacatttttatcagtgttatcccactttgacatcattcttcaaaatacc
tcagagaagaaaccagctttgaagaaagccctcatagttgttctgcagtggtgtttcaac
cacaatttcagcgttcgactttatgcgctagttgcccttaaaaaaatctggggtatgtgc
cgaatgctgcatgtggaagaacttgaagctctgacaccagttatcgaatctagccttcaa
caagtagaaaacatgcatggcacagggaatgctagaaggaactggcagcgaatccaagat
cactttttctttgcgatgtttcatccacttgaggattacagtctagagacaatattttac
actcttccccgtctttcggaacttgctgaagatgaatggatctcactctctaaatttgac
agattcactgacatccctttgccaccagcatttcagtggtatcattctcgaacagaactt
cgtgatctgaaaccaagtgactggtctcagcaagacatgggttcacattcagctgaaaca
gatagccagacagaatggactgatgtgcagaaaaagattataccctggaaaaacagcact
cctagtttagatctggaaatggcatttcaagatcgtgctgctaaacttggtaaatcgaac
agcagattgattgtggtggcctcacttatcgataaacctactaacttaggaggtttatgc
cgtacaagtgaaatatttggggcatctgcgcttgttgttggcagcctccattatatacag
gataagcagttccagcatctgagtgtttctgcagagcagtggctcccccttgttgaggtg
aaaccatctcagcttgttgattatttacagcagaaaaaaacggaagggtacactattatt
ggtgtggagcagacagctaaaagttttgatcttactgaatattgcttcccagagaagtca
ctgttattgctgggaaatgaacatgaaggaatccctgcaaacctgattcaccacctggat
gtctgtgtggaaattcctcagcagggtattattcgatcactcaatgttcatgtcagtgga
gctctgctgatctgggagtacacaaggcaacaagtgatcaagcagaaacaacaaaactaa
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