Acanthisitta chloris (rifleman): 103799088
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Entry
103799088 CDS
T08456
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103799088 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achl03041
]
103799088 (PRPF4)
Spliceosome [BR:
achl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103799088 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
PRP4
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD_LRWD1
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
103799088
NCBI-ProteinID:
XP_009069633
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
CTLCPWGITSLPSGCGIPGHVPGQVGCGWEHPGLVEEHTKLCLSLQPTKPKPPEDSDAPP
AKRAPIFYGSLEEKERERLAKGEAGLLGKEGMKAALEAGNINISSGEVFDLEDHLSERQA
EVLAEFERRKRARQINVSTDDAEVKACLRALGEPSTLFGEGPAERRERLRNILSVVGTDA
LKKTRKDDDRSKKSREEYQQTWYHEGPRSLKTARLWLANYSLPRAAKRLEEARLLKEIPE
ATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCN
LVHTLRGHSTNVGAIVFHPKATVSLDKKDVSLASCAADGSVKLWNLESDEPVADIEGHSM
RVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGG
LDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHVATGSGDNTCKVWDLRQRKCIYT
IPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDG
QLIATCSYDRTFKLWTAE
NT seq
1678 nt
NT seq
+upstream
nt +downstream
nt
atgtactctttgcccttggggcatcacctcattgcccagtggctgcggcatccctggaca
tgttccaggccaggttggatgtggctgggagcatcctggtttagtggaagaacacactaa
actgtgtctttccttgcagcccaccaagcccaagcccccagaggacagcgatgcacctcc
agccaagagagctcccatcttttatgggagcctggaggagaaggagcgggagaggctggc
caagggggaggcaggactgctgggcaaggagggcatgaaggctgccctggaggctggaaa
catcaacatcagcagtggggaggtgtttgacctggaggaccacctgagcgagcggcaggc
ggaggtgctggcggagttcgagcgccggaagcgcgcgcggcagatcaacgtctccacgga
cgacgccgaggtcaaggcctgtctgcgcgccctgggcgagcccagcaccctcttcgggga
gggccctgccgagcgcagggagaggttaagaaatatcctgtctgtggtgggcacagatgc
tttgaagaagaccaggaaagatgatgacaggtccaaaaagtccagggaagagtatcagca
aacctggtaccacgagggcccacggagtctgaagacagccagactgtggctggcaaacta
ctcactgcccagggcagcgaagcggctggaggaagctcggctgctcaaggagattcctga
ggccaccaggacatcccagaggcaggagttgcacaaatccctgaggtccttgaataactt
ctgcagtcagattggggatgatcgtccactatcctactgccacttcagccccaactccaa
gctccttgctacagcctgctggagtgggctgtgcaagctctggtctgtgcctgactgcaa
cctggttcacaccttacgaggtcacagcaccaatgtgggagcaattgtcttccaccccaa
agccactgtgtccctggacaagaaggatgtcagcctggcctcatgtgcagctgatggctc
tgtcaaactctggaacctggaaagtgatgaaccagtggcagatattgaaggacacagcat
gagagtggcacgagtgatgtggcatccatctgggagattcctgggcaccacctgctatga
tcactcctggcgcctgtgggacttggaggctcaggaggagatcctgcaccaggaggggca
cagcaaaggggtctatgacattgccttccacaccgacgggtccctcgccggcacgggtgg
cctggatgcctttggccgcgtgtgggacttgcgcactggacgctgcatcatgttcctgga
aggtcacctgaaggagatctatgggattaacttctccccaaatggataccatgtggcaac
gggcagtggtgacaacacctgcaaggtgtgggacctcaggcagaggaagtgcatttacac
catccctgcccaccagaacctggtgacaggagtcaagtttgaacccaaccatgggaactt
cctgctcacaggagcttatgacaacacagccaagatctggacccaccctggctggtcccc
gttgaagaccctggcagggcatgaggggaaggtgatgggcctggacatctccctggatgg
gcagctgattgccacctgctcctacgacagaaccttcaagctgtggacagctgagtag
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integrated database retrieval system
