Acanthisitta chloris (rifleman): 103799273
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Entry
103799273 CDS
T08456
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achl03000
]
103799273 (RC3H2)
04121 Ubiquitin system [BR:
achl04121
]
103799273 (RC3H2)
Transcription factors [BR:
achl03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103799273 (RC3H2)
Ubiquitin system [BR:
achl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103799273 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
103799273
NCBI-ProteinID:
XP_009069827
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSSVSTTTGNVISVI
GSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALENTKKGGKTGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMAAPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGLDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKEGADYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQDDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPISTPVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcctaggttgctctcacactgtctgtaagacc
tgcctgaacaagctgcatcgcaaggcatgtcctttcgaccagactgccatcaacaccgac
atcgatgtgcttcctgtgaactttgcactcctccagttggttggagcccaggtacctgat
catcagacagtgaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcagaggaagcttgtgacactggtgaactgt
cagctggtggaggaggagggtcgggttagagccatgagggcagctcggtcactgggggag
agaactgtcacagagctcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgtggtgcaaaggctagaaccaagatttcctcaggcctctaaaacgagcattggt
cacgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcctctctgatgcaacttaaagaagagttccggagttacgaggctctgcggagggaacac
gatgcccagattgtccacattgccatggaagcagggctgaggatatcacctgagcagtgg
tcttcccttctttatggagacttggcacacaagtctcacatgcaatccattattgacaag
ctccagtctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggaccctgcaaaccttaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggttgct
gtaaagactgtggtccatgggctggtggatttcattcagaattacagcaggaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggaggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaatcagcgccacagtgcgaacatttcccctcctg
aataaagttggcgtcaacagcagcgtctcaaccaccacgggaaacgtcatctctgtcata
ggaagccctgaagcaacagggaagatggtaccaagtactaatggaatagctaatctagag
actggggtgccccaactgatccctcgctgtgcagacacctccctcagagctctggagaac
accaagaagggaggcaagactggagccaatggccagaatgcttctggctcccctacagaa
tcacttcctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagtgaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccacattctgataacgttcagtacttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacaggatattatcca
ccgcctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagcaca
tttccccctcgagatcgactgaattctccttaccagcctcctcctccgcagccgtatgga
ccagttcctcctgtcccctctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgggagagatacaactctttggatggg
tattactctgtggcttgtcaacctcccaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggatacgatgagcagctgagacggaagccggagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcagcacca
tctccaacaccaccttctcctctcttcagtgtggattttagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggatgttaaaaggagagtgcac
ttattcgagacgcagagaagggcgaaggaggaggatcctataatcccgtttagcgatggg
cccatcatctccaagtggggtgcgatctccaggtcatcccgcacaggctaccacacgaca
gatcctatccaggccactgcttcccaaggaagtgctacgaaacccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcgagatggagtgcctatggcttggattccgct
tcgtcagcacgttatgccgaacgagacaggttcatagttacagatttgtctggtcacagg
aagcattccagcactggagatctactgagcattgaattacagcaggccaaaagcaactca
ttgctccttcagagagaggcgaatgcactagccatgcagcagaagtggaactccctggat
gaaggcagtcgtcttaccttaaatcttttaagcaaagaaattgatttgaggaatggtgag
gtaaaggaaggggctgattacactgaagactgtgcagacacaaagccagaccgagacatt
gaattggagctgtcagccctggatacagacgaacctgatgggcaaggggaacaaatcgaa
gagatcctggacatacagctagggattagctcccaagatgatcagctgctcaacggaaca
actgtagagaatgggcatctgctaaagcagcaccagaaagaatctatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc
acaccagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
