Acanthisitta chloris (rifleman): 103799464
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Entry
103799464 CDS
T08456
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103799464 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103799464 (SMG5)
03032 DNA replication proteins [BR:
achl03032
]
103799464 (SMG5)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103799464 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
103799464 (SMG5)
DNA replication proteins [BR:
achl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
103799464 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
103799464
NCBI-ProteinID:
XP_009070034
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
LRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAG
IGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYL
GDLARYQNELAGVDTELLAERFYYQALSVAPQIGXXXNQLGTLAGSKYYNVEATYCYLRC
IQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLL
QPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTNEDEEEYESGYSFLPDLLIFRM
VIICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGT
DEQEPREPVNSLEKETEAELANHQPSEEQRRSDCKKSKKYSRLSCLRRRRHPQKVDESDL
SEGFDSDSSQGSTKGSEGSDSGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGE
EGSGRGKGGPREALQNCVDGGGLGDSKGSSKPEAVDAAVNGPVALSTTEASIASNLQAMS
TQLFQTKRCFRLAPTFSNILLKPSDTPALKDGLDSKPCVNGDLEKPSLAEQDDVSDSEES
ISSHKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVL
LNLLPSAADLQESGLPLCEEVKDLLSDAELPDLRANLLLPEDVALRNLPPLKNAHKRFNF
EQDRPIFSALEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQAEQDNLLHQAQ
AQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLA
IVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKS
FERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSVFSAPMQ
NT seq
2881 nt
NT seq
+upstream
nt +downstream
nt
gctgagggagctgtgtgtgaagctgatgttcctccatccagtggattatggaagaaaagc
agaagagctgctctggaggaaagtttactatgaagtgatccagctgattaaaacaaacaa
aaagcacatccacagccgcagcaccctggagtgtgcctacaggactcacctggtggctgg
gattggcttctaccagcaccttctgctctacatccagtctcactaccaactggagctgca
gtgctgcattgactggacacacgtgacagatcctctcataggctgcaagaaacctgtgtc
tgcctcggagaaggagatggagtgggcacagatggcctgtcaccggtgtctggtgtacct
gggggatctggctcgctaccagaacgagctggcaggggtggacacagagctgctggcaga
gagattctactatcaagccctttctgttgcaccacaaattggnnnnnnnnnnaaccagct
ggggaccttggcaggcagcaagtactacaacgtggaagcaacttactgctacctacgctg
tatccagtctgaagtgtccttcgagggtgcctacgggaacctgaagcgtctgtatgacaa
agcagccaagatgtatcaccagctgaagaaatgtgagaccaggaagttgtctccaagcaa
gaaacgaggcaaagacattaagaggttgctggtgagcttcatgtatctgcagagcctttt
gcagccaaagagcagctctctggactctgagctgacatctctctgccagtctgtgctgga
ggatttcaacctgtgcttgttctacctgccgtctcctcccaacctgagctcaaccaatga
agatgaagaagagtatgagagtggctactccttcctccctgacctgctcatcttccgtat
ggtcatcatctgcctcatgagtgttcacagcctcaagagggcaggttccaaacagtacag
tgcagccattgccttcactctggctctcttctcccacctcatcaatcatgtcaacattcg
cctccaggcagagctggaagagggggaaaacccagtgccagcattccagagtgatggcac
agatgagcaggagccaagggaacctgtgaactccctggagaaggagactgaggctgagct
ggccaaccaccagcccagtgaggagcagcgcaggagtgactgcaaaaagagcaagaaata
ctcgcggctctcgtgcctgaggcgccgccgccacccccagaaggtggatgagagcgacct
gagcgagggcttcgactctgactccagccagggctccaccaagggcagtgagggctcaga
cagtggctcagagaagagcgatgaggaggcagaggctgcttttgacgtggagactgactc
agacatgaatagccaagagtctcgctcggacctggaggacatggaggatgagcctgggga
ggagggaagtggccgaggcaaaggtgggcccagagaggccttacagaactgtgtggatgg
tggtgggctgggggactccaagggcagctccaagcctgaggctgtggatgcagcagtcaa
tggcccagtggccctgagcaccactgaggccagcatagccagcaacctccaggccatgtc
cacgcagctcttccagaccaaacgctgcttccgcctggctcccaccttcagcaacatcct
cctcaagcccagtgacacccctgccctgaaggatgggctggacagcaaaccctgtgtcaa
tggagatctggagaagcccagcctggcagagcaagatgatgtgtctgactctgaggaaag
catttccagccacaaatcctgcaggaatgagagatccctccaggagaagctggagatagt
gaccaatgaggggctgctgctcactgtcaaggtgttcctggactggctgaggacaaacac
agacctcatcatcatgtgtgctcagagctcccagagcctgtggaacaggctgtctgtgct
cctcaacctcctgccttctgctgcagacctgcaggaatcagggctgcccctgtgtgagga
ggtgaaggacctgctgagtgatgctgagctgccagacctgagggccaacctgctgctccc
cgaggacgtggccctgcgcaacctgccccctctgaagaatgctcacaagaggtttaactt
tgagcaggacagacccatcttctctgcactcgaggagtctgtcgtgaggatctgctgcat
tcggagctttggccacttcattacccacctgcaaggcagcatcctgcagttcaactcaga
gcttggcatcttcatcagcatagcccaggcagagcaggacaacctgctgcaccaggccca
ggcccagtttcacatggctgcagaggaggctcgaaggaacaggctcatgagggacatggc
tcagctccggctgcagctggaggtttcacagctggagggaagtctgcagcagcccaaggc
acagtcagccatgtctccttaccttgtcccagacacccaagccctgtgccagcacttggc
catcgtcaaacagttggcaaccagtgggaggttcataatcatcatccctcgaacagtgat
tgatggcttggacttcctgaagaaggagaatgcaggagctcgggacagcatccgctacct
ggaggctgagtttaagaagggaaacaggtacattcgttgccagaaggatgttgggaagag
ctttgagaggcataaattgaagagacaagatttagatgcctggaatctctataagatcct
ggacagctgcaaacagctgacagtgtcccaggggagtggagaggatgacaccacagggat
ggtcactatcatcacaggcttccagctggaggacccaagtgtgttctcagcaccaatgca
g
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