Acanthisitta chloris (rifleman): 103799633
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Entry
103799633 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103799633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103799633
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103799633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
103799633
NCBI-ProteinID:
XP_009070218
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
GDENEAERPEEEKSSAPPPPGSEEEAAENGVVKTVVAEAEDDSDSDSDDDEDDVQVTIGD
IKTGAPQFSYGAAPVNLNIKTGGRAYGSSGAKVKGVDLDAPGSINGVPLLEVDLDSFEDK
PWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVTSATNKITVQQGRTGNLEK
ELAVQSTKPDFTSPPALFKSGIPTNRRLSGTIDVIGQSITISRVEGRRRANENSNIQVLS
ERSNPEVDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGKYPVLQRI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ggtgatgaaaatgaagcagagagaccagaagaagaaaaatctagtgctccacctccacct
ggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacggtagtggcagaggctgag
gatgacagtgatagtgatagtgatgatgatgaagatgatgttcaagtcaccataggggat
attaaaacaggagctccacagtttagttatggagcagcacctgtgaatctcaatattaag
acaggaggacgagcttatggatcttctggcgcaaaagttaaaggagtggacctggatgca
ccaggcagtatcaatggtgtgccacttttggaagtggatttagattcttttgaagataaa
ccttggagaaagccaggggctgacctgtccgattactttaactatgggttcaatgaagat
acctggaaagcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttacca
gttacctcagccaccaataaaattacggtacagcagggcagaactggaaatttggagaaa
gagttggcagtgcagtcgaccaaacctgatttcacatctcctcctgccttattcaaatca
ggaattccaacaaacaggcgattatctggcaccatagatgtgattggacagagcatcact
atcagcagggtggaaggacgacggcgtgctaatgagaacagcaacatacaggttctttca
gaacgctctaatcctgaagtagacaattttaccaagccacctccatttttccctccagga
gctccacctacccaccttccaccacctcctttcctcccaccccctccaactgttagtact
gctccacctctgattcccccaccaggtaaatatcctgtactacaaaggatatga
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