Acanthisitta chloris (rifleman): 103799868
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Entry
103799868 CDS
T08456
Symbol
ERCC4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03420
Nucleotide excision repair
achl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103799868 (ERCC4)
03460 Fanconi anemia pathway
103799868 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achl03032
]
103799868 (ERCC4)
03400 DNA repair and recombination proteins [BR:
achl03400
]
103799868 (ERCC4)
DNA replication proteins [BR:
achl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103799868 (ERCC4)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
103799868 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
DUF4110
Motif
Other DBs
NCBI-GeneID:
103799868
NCBI-ProteinID:
XP_009070469
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
EYFIDQLRSDGVVHLPRRVTNEVTNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLIT
GILVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAXXXXXXXXXXXXXNIFVRK
LYLWPRFHIAVNSFLEKHKPEVVEIHVAMTPAMLAIQTSILDILNACLRELKRYNPALEV
EDLSLENAIAKPFDKTIRHYLDPLWHQLGAKSKSLVQDLKILRTLLLYLTQYDCVTFLNL
LESLRASEKAFGENSGWLFLDSSASMFVNARARVYRIADEKLNQKGKGSEKRDGKKETEL
KKELVLESNPKWEALREVLKEIENENKNSDNLGGPGQVLICASDDRACAQLREFILDGAE
AFLTKLYNRTFGKDEKAAEVWITDRKAVKSKGNTKPATGPQAKKAKLTSSSKPKKHKKQQ
DRTIIQMIGKTEEEKGEEVEVEDNKELSGSQESSTDETIPEDFDVNLPSDCYYGIFKDPL
TIIHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGRPLRVYFLIYG
GSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLIRDARPASVPVDTRK
AGGQEQKDVQQTIVVDMREFRSELPSLIHRRGIDVEPVTLEVGDYILTPDICVERKSISD
LIGSLNNGRLYSQCVSMSRYYKRPVLLIEFDPSKSFSLIPRGSLHQEISGNDVTSKLTLL
TLHFPKLRILWCPSPHATAELFEELKQNHPQPNAETAMAVTADSEILPESDKYNPGPQDF
LLKMPGVNAKNCRALMNHVKSIAELVTLSKEELAKILGNAANASQLFDFIH
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
gagtattttattgatcagctgaggtcagatggagttgttcacctccctcggcgtgttacc
aatgaagttacaaacaacactcgctacgagttctacacacagggaggagtcatcttcgca
acgagtcggatcctcgtggtggatttccttactgacagaattcctgcaaacctcattact
ggcattttggtgtacaaagcacacagaatcatcgagtcctgccaggaagcatttatcttg
cgcctgtaccgccagaagaacaagcaaggcttcattaaagccttcacagataatgcagtt
gcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatatttttgtcaggaag
ctttatctgtggccaagatttcatatagcagtgaactcctttttggagaagcataaacct
gaagtggtggaaatacacgtggcaatgacccctgccatgcttgccatccagacttcaatc
ctggacatcctgaatgcctgtctgagggagctcaaacggtacaatccagctctggaagtg
gaagatctgtctctggaaaatgctattgccaaacctttcgacaagacaatacgtcactat
ttagatcctctctggcatcagcttggagccaagtcaaaatctttggtccaggacttgaag
atcctccgtactttgctcctgtatctaactcagtatgattgtgtcaccttcctcaatctc
ctggagtcactgagagcaagtgaaaaagcttttggtgagaattcaggttggctgttcctc
gactccagcgcgtcgatgtttgtgaacgctcgagccagagtttatcgcattgcagatgag
aagctgaatcagaaaggcaaaggctctgagaaacgtgatgggaagaaggaaactgaactg
aaaaaagaattggtgctggaaagtaacccaaagtgggaagctttgagagaagtactgaag
gagattgaaaatgagaataagaacagtgacaaccttggtggtccagggcaagtgcttatt
tgtgccagcgatgaccgagcctgtgcacagctcagggagttcattcttgatggagcagaa
gcttttttaacaaagctgtataacagaacctttggaaaggatgagaaagctgcagaggtg
tggattacagacagaaaagctgtcaagtccaaaggaaacaccaaaccagccacaggacct
caagccaagaaagccaaactcacatcttcttcaaaaccaaagaaacacaagaagcagcag
gaccgaactataatccaaatgatagggaaaactgaggaggagaagggagaggaggtagag
gtggaagataataaagaattaagtggtagccaggaaagcagcactgacgagaccattccc
gaagacttcgatgtgaacttaccctcagactgttactatggtattttcaaggaccctttg
accattatccaccccttgcagggctgcagtgatccctatgctctcactcgggtcctgcac
gaggtagagccaagatatgttgtgctatatgatgcagagctaacctttgttcggcagctg
gaaatctacaaggcaagcaggcctgggaggcctttgagagtgtatttcctgatctatgga
ggctccacagaggagcagcgatacctcacagctctgaggaaggagaaagaggcctttgaa
aagctcattagggagaaagctagcatggttgttcctgaagaaagagaaggaagagatgaa
accaacttagacctgataagagatgctagacctgcctctgtccctgttgacacacgcaaa
gcaggtggacaggagcagaaggatgtgcagcaaactatagttgtggatatgagggagttt
cgcagtgagctgccatcgctgatccatcgccgtggcattgacgtggagcctgtcactttg
gaagttggagattatattttgactcctgacatctgcgtggagcggaagagcatcagtgac
ctgattggctccctgaacaatggcaggttgtactcacagtgtgtctccatgtcccgttac
tacaagagaccagttctcctcatcgaattcgatcccagcaaatccttctccctgattccg
cgaggctctctgcatcaggagatttcaggcaatgatgtgacttccaagctcacccttctt
accctgcatttcccaaagctacgaatcctgtggtgtccctctccccacgccactgctgag
ctgtttgaggagttgaaacaaaaccacccccagcccaatgcagagacagccatggctgtc
accgccgactcggagatcctgcccgagtccgacaagtacaaccctgggccccaggacttc
ctgctcaaaatgccaggggtgaatgccaagaactgccgagccctgatgaaccacgtgaag
agcattgcagagctggtgacactgtcaaaggaagaactcgccaagattttgggcaatgct
gccaatgcctcacaactcttcgacttcattcac
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