Acanthisitta chloris (rifleman): 103800239
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Entry
103800239 CDS
T08456
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103800239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achl03021
]
103800239
03036 Chromosome and associated proteins [BR:
achl03036
]
103800239
Transcription machinery [BR:
achl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103800239
Chromosome and associated proteins [BR:
achl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103800239
Chromatin remodeling factors
BAF complex
103800239
PBAF complex
103800239
GBAF(ncBAF) complex
103800239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103800239
NCBI-ProteinID:
XP_009070857
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
LQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETA
LNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSV
AGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYL
LQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQ
MSDLPVKVTHTETGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEE
EESSRLEAEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAI
TERVEKQSSLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLME
HKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLT
TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL
PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLR
RLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNT
IMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHR
VLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRA
GGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA
KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREE
EFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGS
RQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRR
GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDR
NT seq
3160 nt
NT seq
+upstream
nt +downstream
nt
gcttcaggctcgaattgctcacagaatccaggaactggagaacttgcctggttccctgcc
tcctgatctacgaaccaaagctacagtggaattgaaggcacttagattactgaatttcca
gcgccagctaagacaagaggttgtggcgtgcatgcgtcgtgacacaacactggagacagc
actgaactccaaagcctacaagcgaagcaagcgccagactttgagggaggccaggatgac
agaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtaggcagaagcatca
ggaatacctgaatagcatactgcagcatgctaaagactttaaagagtaccaccggtcagt
cgctgggaaaattcagaaactttctaaagctgtggccacttggcatgccaacactgaacg
tgagcagaaaaaagagactgagagaattgagaaagaaagaatgagaagactaatggctga
agatgaagaaggctaccgtaaactgattgatcaaaagaaagacagacgtctggcctacct
attgcagcagacagatgagtatgtggctaatttgactaacctggtatgggagcataaaca
ggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaggctgaagaaaa
tgcagaaggaatggcatctggtcttggtccggatggagagcccatagatgagagcagtca
gatgagtgacctgccggtcaaagtgactcacacagaaacaggcaaagttcttcttggacc
agaagcaccaaaagcaagtcagctggatgcttggctggaaatgaaccctggctatgaagt
tgctcccagatctgacagtgaagacgaaagtggctctgaatatgaggaggaggatgagga
ggaagaatcaagcagattagaagcagaagaaaagatactcctagatcctaacagtgagga
agtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagatgtggatgatga
atatagcatgcaatatagtgctagaggttctcagtcctactacactgttgctcatgcaat
cacagaaagggtggaaaagcagtcttctcttcttattaatggcacactaaaacattatca
gctccagggactggaatggatggtttcactctataataacaatctgaatggaattttagc
tgatgaaatgggactgggaaagacaatacagactattgcactcatcacttacctgatgga
gcacaaaagactcaatggcccctatctcatcattgttcccctgtcgactttatccaactg
gacgtacgaatttgacaaatgggctccttctgtggtgaagatatcttacaagggtacacc
tgcaatgcgccgctcacttgttccacagcttcgaagtggaaaattcaatgttcttttaac
tacttatgagtacataataaaggacaaacatatccttgctaagattcggtggaagtatat
gatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgactcaggtcttaaa
tactcattatgtggcccctaggcgaatactgctgactgggactccgttgcagaacaaatt
gcctgaactttgggctcttctcaatttcctcctcccaaccattttcaagagctgtagcac
ctttgaacagtggttcaacgctccatttgccatgactggagaaagggtggacttaaatga
ggaagaaactattctgatcatccgtcgtctccataaagtgcttcgacccttcttgttgag
aagactgaagaaagaggttgagtctcaactgccagaaaaggtggaatatgtgatcaaatg
tgatatgtcagctcttcagaagatactgtaccgtcacatgcaagccaaggggatccttct
cacagatggttctgagaaagacaagaagggaaaaggtggggcaaaaactctcatgaacac
tatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacacattgaggagtc
cttcgctgaacatttaggctactcaaatggtgtcatcaacggagctgaactttatcgggc
ttcaggaaagtttgagctactcgatcgtattctgccaaagttacgagctactaaccatcg
tgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagattactttgcatt
tcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggatcgagctgcttt
gttgaagaagttcaatgaacctgggtcacaatacttcatcttcttgctgagtacaagggc
tggagggctaggcttaaatctccaggctgctgacactgttataatctttgatagtgactg
gaatcctcatcaggacttgcaggcccaagacagagcccacagaattggtcaacagaatga
agttcgagtcttgcggttgtgcactgtgaacagtgtggaagagaagatacttgctgctgc
aaagtataaactgaatgtagatcaaaaagttattcaggcaggaatgtttgatcagaaatc
ttcaagccatgaaaggagagccttcctacaggctatattggagcatgaagaagaaaatga
ggaggaagatgaagtccctgatgatgagactctgaatcagatgattgctcgacgtgagga
ggaatttgatctcttcatgcgcatggacatggaccgtcgcagggaggatgccagaaaccc
taaacgtaagccccgcttgatggaggaggacgaattaccatcctggattattaaggatga
tgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatatttggaagaggatc
ccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacagtggctgcgggc
aattgaagacggcaatttggaagaaatggaggaggaagtccggcttaaaaaacggaagag
acgaagaaatgtggataaagattctgggaaggaggatggagagaaagcaaagaaaagaag
gggcagacctcctgcagagaagttgtcacccaacccacccaaactgacaaaacaaatgaa
tgctatcattgatactgtgataaactacaaagataggtga
DBGET
integrated database retrieval system
