Acanthisitta chloris (rifleman): 103800263
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Entry
103800263 CDS
T08456
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achl03400
]
103800263 (PMS1)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103800263 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
103800263
NCBI-ProteinID:
XP_009070882
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All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MKQLPGETIRLLSSSQVITSVLNVVKELIENALDASATNVDIKLENYGFDKIEVRDNGSG
IKVDDVPVMAVKHYTSKISSSEDLERLTTYGFRGEALGAICSISEVLITTKTADDDFSTQ
YALDSKGHVTSRKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVQDLLTAYG
IIKPDLRLTLTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHYSEYPEISLSGFL
PKAESDSSLTSLSSSERSFIFINNRPIVEKEILKIIRQYYSLVTQKDSTRLYPVFFLNIT
VPASAVDVNVTPDKTQVLLHHKESVLLAVENVLKSLYGPLPATVPGESNKPDVTSEDMFG
QRTGQTDVIVNEMGPSGNNKLHAHTSFLSVSNDVQNCQAGKNTEICLNHQTYCGDNILDK
REVSKSDAFPDSSLNLLCEKEQNGQNMTDIQSNGVAVDPKSKKANEHHLSSDNIDKTNKN
GESLVPKDLPEISADSWSMGNGLQDRLGDKLEPVKILIPEVGGTINKQNEYSGEQSTDAQ
ILNQSLKKRNVISDKFGHVTAYDLINSRIIKKPKSALEFFTQECRPKLIDDNPKASMEDI
LLEIEEQWKNLNEEEKKNYEVKATKDLERYNRQVKKANVHQPTKQAEKHKPKPQSSATDQ
QKLDKIFHNQMEKKGKLEQPVKTVRVPFSLSCCRHHLQRQEKSASDEHELFLIRRQSFPD
VWIFATDKELKLLNPYRLEEALLCKRLLMNHKLPVEKLDKPIVLSDSLLGGSQYMAALCK
MQKNFPSSHGSGYLSDPRLIANGFQIKVIEGISVTESHLEIEGMANCLPYYGISDLKEIL
NAVVNGNAKEVYECRPLKVINYLEGEAVRLSRQLPLHLSKEDVQNTIYRMKQQLGKETKG
CVHGRPFFHHLTDIPEADKHNSTEIIQ
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctaccgggagagactattcgtctcctttcaagttctcaggtgatcacttca
gtgctcaacgtggtgaaggagctgatagaaaatgccttggatgccagtgccacaaatgtt
gatattaaactggagaattatgggtttgacaaaatagaagtaagagacaatggcagtgga
atcaaggttgatgatgttccagttatggcagttaaacactacacttccaaaataagctct
tctgaggacctggaaagattgacaacgtatggtttccgtggggaagctctgggagccatt
tgcagcatatcagaggttttgatcacaacaaagacagctgatgatgatttcagcactcag
tatgctttggatagcaaggggcatgtgacttctagaaagccttctcatcttgggcaaggt
actacagtgaccgtcctaaagttatttaagaatcttcctgtaagaaagcagttttactca
acaaatagaaaatgtaaggaagaactcaaaaaagtccaagatctactgacagcatatggt
atcatcaaacccgatctgaggctaacattaacacataataaggcagttatttggcagaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactactctgaatatcctgagataagtctttctggatttctc
ccaaaagctgagtcagacagttccttgacaagcctttcaagttcagaaaggagtttcatt
tttataaataatcgtccaattgttgagaaggaaatattgaagataattcgacaatactac
agcctggtgacacagaaggactctactcgtttatatcctgttttctttttgaacattact
gttcctgcctctgctgtggatgtgaatgtaacacctgataaaactcaagttttgctgcat
cataaggaatctgtcttacttgcagttgaaaatgtgttgaaatccctctatgggccacta
cctgctacagtccctggtgaaagtaataaaccagatgttacctcagaagacatgtttggt
cagagaacaggacaaacagatgtgattgttaatgaaatgggaccatctggaaacaataag
ctacatgctcatacttcattcctttcagtcagcaatgatgtgcaaaactgtcaagcagga
aaaaacacagagatctgcttaaatcatcagacgtattgtggtgataatatcctggacaaa
agagaggtttctaagagtgatgcctttccagacagctccttaaatttattgtgtgagaag
gaacagaatggacagaatatgactgatattcaaagtaatggtgttgctgtggaccccaag
tctaaaaaagccaatgagcatcatttgagttctgataatattgacaaaacaaataaaaat
ggggaatctttagtccctaaagacttacctgaaatctctgctgatagctggagtatggga
aatggacttcaagaccgcctaggagacaagctggaacctgttaagattttgattccagaa
gttggaggaacaattaataagcaaaatgaatacagtggtgaacaaagcactgatgcacaa
atactaaatcaaagcctaaagaaaagaaatgtgataagtgataaattcggtcatgtgaca
gcttatgatttaattaatagtagaataataaagaaaccaaagtctgcacttgaatttttc
actcaagaatgtcgtccaaaattgatagatgataatccaaaggccagcatggaggacatc
ctgctggaaattgaagagcagtggaaaaatttgaatgaagaggaaaaaaagaattatgaa
gtaaaagctactaaagacctggagcggtacaacagacaggtcaagaaagctaatgtgcat
caaccgacaaagcaggcagaaaaacacaaacccaagccccagagttctgcaactgaccag
cagaaacttgacaagatatttcataatcagatggaaaagaaggggaaacttgaacagcct
gtgaaaactgtgagagtgcctttctctctgagttgctgtagacatcaccttcagagacag
gagaaaagtgcgtcagatgaacatgagctcttcctcatccgtcgtcagagttttcctgat
gtctggatatttgctactgataaagaactcaagttgctgaatccatacagattggaagaa
gccctgctatgtaaaagattactgatgaaccataagcttccagtagagaaactggacaag
ccaattgtgctatcagacagtcttcttggtggatctcagtatatggctgctctgtgtaaa
atgcagaagaatttcccgagttcccatggatcaggttatttgtcagatccaagacttata
gcaaatggattccagataaaagtcatagaaggtatttcagttacagaaagtcatctggaa
atagaaggaatggcaaattgtctgccatattatggtatttctgacttgaaagaaattctg
aatgcagtggttaatggaaatgcaaaggaagtctatgaatgtaggcctctcaaagtgata
aattacttggagggagaagcagtacgtttatctcggcagctgcccttacatttgtcaaaa
gaagatgtacaaaacacaatttacaggatgaagcaacagcttggaaaggaaactaaaggc
tgtgttcatggtcgtcctttttttcatcacttaacagatattccagaggctgacaagcac
aactccacagaaattattcagtaa
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