Acanthisitta chloris (rifleman): 103801114
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Entry
103801114 CDS
T08456
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03013
Nucleocytoplasmic transport
achl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103801114 (PNN)
03015 mRNA surveillance pathway
103801114 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103801114 (PNN)
03041 Spliceosome [BR:
achl03041
]
103801114 (PNN)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103801114 (PNN)
Spliceosome [BR:
achl03041
]
Complex C
Other components
EJC/TREX
103801114 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
103801114
NCBI-ProteinID:
XP_009071767
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
PPQNRLLALTGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQ
ESDAEDDDIKKPALPSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQ
ESTVAIATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVELA
QLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLMEDSQRKMNALFESRRNEFAE
QINKMEARPRRQSMKEKEQQEVQNEEKKEEQNKEQEEGKVAQQVEELETGNQHNDVEMEE
VGEEKGKTGSASGHSDAEKEQEEDEQKHDMEMKVEETTEARENNKQQDDQHEEATVVKEE
SENIQPVDNEQDMAEMNEADSVEPVENENGKEIEPECDAQPEKVCNVPSPEKEKGMKTEN
KTEFEETQEKASEGQTEPVGEALCQPQSVPLSQSPQLSQSTQDREPQADKDENAVVSVKV
VEAQAEQNQTSGVESKSKTRSRSRGRAGNKAGKSHSRSSSSSSSSTSSSTTSGSSSSTGS
SSSRSSSTSSSTTSGSTSRDSSSSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGV
DRSHKSSKGGSRDTKSSKDKSSRSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
1972 nt
NT seq
+upstream
nt +downstream
nt
gccccctcagaacaggctcttagccctcacaggccccggtggaggtagagggcgcgggag
cttattgctaaggcgtggattctcggatagtggaggaggacccccagccaaacagaggga
tcttgaaggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgcca
agaaagcgacgcagaggatgatgatattaaaaagccagcgttgccatcttctgttgttgc
tacctccaaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgaaaaagg
aaaacaaaggaatcgacgtatatttggcctgttgatgggcactcttcaaaaatttaagca
agagtccacagttgctattgctactgagaggcaaaagagacgacaagaaattgaacaaaa
acttgaagtgcaggcagaggaagagagaaagcaagttgaaaatgagaggcgagagctgtt
tgaagaaagacgtgctaaacagacagagctgcggttgctggagcaaaaggttgagcttgc
tcagttgcaagaagaatggaatgaacataacgctaaaataattaaatacataagaacaaa
gacaaaacctcacttgttctacatacctggcagaatgtgtcctgcgacgcagaagttgat
ggaagattcacagagaaagatgaatgcactctttgaaagcaggcgaaatgaatttgcaga
gcagattaacaaaatggaggccaggcccagaagacaatccatgaaggaaaaagaacagca
ggaggtgcaaaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggt
ggctcagcaggtggaagagttggagacaggtaatcagcacaatgatgtagaaatggagga
ggtaggggaagaaaagggaaaaacaggttcagcttcagggcatagtgatgcagagaaaga
acaggaagaggatgaacagaaacatgatatggagatgaaagtagaagagactactgaggc
gagggagaataacaagcaacaggatgatcagcatgaggaggccacagttgtaaaagagga
aagtgaaaacattcagccagtggataatgagcaggatatggctgaaatgaatgaggcaga
tagtgtagaacctgtagaaaatgaaaatggcaaagaaatagaaccagagtgtgatgctca
gccagaaaaagtgtgtaatgttccttctcctgagaaggagaaaggtatgaaaacagaaaa
taaaactgaatttgaagaaacacaggagaaagcatctgaaggtcagacagaacctgtggg
tgaggctctatgtcagccccagtctgtgccactatcacagtcacctcagttgtctcagtc
cacccaggatagagagccccaggcagacaaggatgaaaatgctgtggtgtctgtaaaggt
ggttgaggcacaggcagagcagaatcagacatcaggtgtagaaagtaagagtaagactag
gagtagaagcagggggagggcagggaacaaagctggtaagagtcatagccgtagcagcag
cagtagtagcagtagtacttcaagcagtactactagtggaagtagttccagcactggcag
cagtagcagtcgaagtagttccaccagcagcagcactacaagtggaagtactagcaggga
cagtagcagcagtagctctagcagcagtgaaagtagaagtcgaagccgaggccgagggca
taacagagatagaaaacgcaggaggagcacagacaggaagcgaagggatgcttcaggagt
agatagaagtcacaagtcctcaaaaggtgggagtagagataccaaaagctcaaaggataa
aagttcaaggtctgacagaaagaggtctatatcagaaagtagtcggtcaggcaagagaac
ttcacggagtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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