Acanthisitta chloris (rifleman): 103801369 Help Entry 103801369         CDS       T08456                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism achl  Acanthisitta chloris (rifleman) Pathway achl04140   Autophagy - animal achl04148   Efferocytosis achl05132   Salmonella infection Brite KEGG Orthology (KO) [BR:achl00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     103801369 (VPS39)    04148 Efferocytosis     103801369 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     103801369 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:achl04131]     103801369 (VPS39) Membrane trafficking [BR:achl04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     103801369 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Lgl_C SAM_CEP-1_C Motif Other DBs NCBI-GeneID:  103801369 NCBI-ProteinID:  XP_009072029 LinkDB All DBs Position Unknown AA seq 850 aa AA seqDB search EWLLVGTKQGHLLLYRIKKDMGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENN IYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHE LQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADG KVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLV QSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDD SDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQ YPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKL LQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHE KALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSGWVLRDFPEDGLKIFTED LPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKE YLNSFPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLL GRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGP IKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKR FNQVLKNLLHAEFLRVQEERILHQQIKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYF CSKEVNTLDT NT seq 2555 nt NT seq  +upstreamnt  +downstreamnt aggaatggctccttgttggtaccaaacaagggcatcttctgctttacaggatcaaaaaag acatgggttgcaataggtttgaagtgacactagagaaatctaacaagaacttctcaaaga agattcagcagattcatgttgtttctcaatttaaaattttggtcagtctattagaaaaca acatttatgttcatgacctgttgacatttcaacaaatcactacagtttccaaagcaaaag gtgcatctctcttcacttgtgatcttcagcagtcagatacaggggaagaggtgctgagaa tgtgtgtggcagtgcgtaagaagctacagctttatttttggaaggacagagagttccatg aactacagggggacttcagtgtacctgatgtacccaagtctatggcctggtgtgaaaact ccatctgtgtaggcttcaagagggactattacttgatacgggtggatggaaaaggatcca tcaaagaactgtttcccacagggaagcagctggaaccattggtagctcctgtagcagatg gaaaagttgcagtcggccaagatgatctaacagttgttcttaacgaagaagggatctgta ctcagaaatgtgccttgaactggacagatattcctattgccatggagcaccagcctccct acatcatcgctgttctgccaagatacgtggagatccgcacttttgaacctcggctgctgg tacagagcattgagctgcagagaccacgcttcatcacctctggaggcacaaatattatat atgtggcaagtaatcactttgtttggcggctcattccagtgtccatagccacccagatcc agcagcttctgcaggacaaacagtttgagttggctttgcagttggcagaaatgaaagatg attcagatagtgaaaaacgacaacaaattcaccacataaagaacctctttgccttcaacc ttttctgccagaagcgctttgatgaatccatgcaagtttttgccaagcttggtacagatc ccactcatgtgatgggtctgtatcctgacctcctgcccacagattacaggaaacagctgc aatatcctaaccccctgccagggctctctggggcagagctggagaaggcacacttagctc tgatagactacctaactcaaaaaagaagtcagctggtgaagaagctaaatgattctgacc atcagtctagtacctcacccctcatggaaggaacacccacaatcaaatccaaaaagaagc tgctacaaatcatcgataccaccttgttaaagtgttacctgcatacaaatgtagcactgg tggcacctttgctacgtctggagaacaatcactgccatattgaggagagtgagcatgtac taaagaaggcacacaaatatagtgagctgataatactgtatgaaaaaaaaggtctgcatg aaaaagctttgcaggtactggtggatcagtcaaagaaagccaactctcctttgaagggtc atgagcggacagtgcaatatctgcagcatttaggcacagagaacttgcacttggtatttt cctactctggctgggtgctgagagattttcctgaagacggactgaagatatttacagaag acctccctgaagtagaagctttgccacgagacaaagtgctcagtttcttgatagaaaatt ttaaaagcttgactattccttatctggaacacatcattcatgtctgggaagaaactggtg cagattttcacaactgtctgatccagctgtactgtgagaaagtgcagggcttaatgaaag aatatctcaattctttccctgcagataaaactccagtgcctgctggggaggaaggaggag acttgggggattaccggaaaaagcttctgctttttctggagaagtctagctggtatgaac ctagtcgactaattagtgacttcccctttgatggtctcctggaagaacgtgctctgctct tgggtcgtatggggaagcatgaacaagctctgtttatttatgttcatattttgaaggaca ccaacatggctgaaaactactgccataaacattatgacagaaacaaagatggcaacaaag atgtctatttgtcgctgctccggatgtatctgtccccacctagtgttcattgccttgggc caatcaagatggaagtgctggagcctcaagccaacctgcaggctgctcttcaggttttgg agctacatcacagcaaattggataccactaaggcaataaacctgcttccagcaaatacac agattagtgagattcgcatcttcttagagaaagtccttgaagaaaatgctcagaagaaaa gatttaatcaagtacttaagaatcttctccatgcagagtttctgagggtccaggaggagc ggatcttgcatcagcaaattaagtgcattattacagaggagaaggtgtgcactgtttgta aaaagaagataggtaacagtgcatttgctcgataccctaatgcaatagttgtgcattatt tctgctccaaagaagtcaacacattggatacctga

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