KEGG   Acanthisitta chloris (rifleman): 103801369
Entry
103801369         CDS       T08456                                 
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl04140  Autophagy - animal
achl04148  Efferocytosis
achl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:achl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103801369 (VPS39)
   04148 Efferocytosis
    103801369 (VPS39)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103801369 (VPS39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:achl04131]
    103801369 (VPS39)
Membrane trafficking [BR:achl04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    103801369 (VPS39)
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Lgl_C SAM_CEP-1_C
Other DBs
NCBI-GeneID: 103801369
NCBI-ProteinID: XP_009072029
LinkDB
Position
Unknown
AA seq 850 aa
EWLLVGTKQGHLLLYRIKKDMGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENN
IYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHE
LQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADG
KVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLV
QSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDD
SDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQ
YPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKL
LQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHE
KALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSGWVLRDFPEDGLKIFTED
LPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKE
YLNSFPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLL
GRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGP
IKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKR
FNQVLKNLLHAEFLRVQEERILHQQIKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYF
CSKEVNTLDT
NT seq 2555 nt   +upstreamnt  +downstreamnt
aggaatggctccttgttggtaccaaacaagggcatcttctgctttacaggatcaaaaaag
acatgggttgcaataggtttgaagtgacactagagaaatctaacaagaacttctcaaaga
agattcagcagattcatgttgtttctcaatttaaaattttggtcagtctattagaaaaca
acatttatgttcatgacctgttgacatttcaacaaatcactacagtttccaaagcaaaag
gtgcatctctcttcacttgtgatcttcagcagtcagatacaggggaagaggtgctgagaa
tgtgtgtggcagtgcgtaagaagctacagctttatttttggaaggacagagagttccatg
aactacagggggacttcagtgtacctgatgtacccaagtctatggcctggtgtgaaaact
ccatctgtgtaggcttcaagagggactattacttgatacgggtggatggaaaaggatcca
tcaaagaactgtttcccacagggaagcagctggaaccattggtagctcctgtagcagatg
gaaaagttgcagtcggccaagatgatctaacagttgttcttaacgaagaagggatctgta
ctcagaaatgtgccttgaactggacagatattcctattgccatggagcaccagcctccct
acatcatcgctgttctgccaagatacgtggagatccgcacttttgaacctcggctgctgg
tacagagcattgagctgcagagaccacgcttcatcacctctggaggcacaaatattatat
atgtggcaagtaatcactttgtttggcggctcattccagtgtccatagccacccagatcc
agcagcttctgcaggacaaacagtttgagttggctttgcagttggcagaaatgaaagatg
attcagatagtgaaaaacgacaacaaattcaccacataaagaacctctttgccttcaacc
ttttctgccagaagcgctttgatgaatccatgcaagtttttgccaagcttggtacagatc
ccactcatgtgatgggtctgtatcctgacctcctgcccacagattacaggaaacagctgc
aatatcctaaccccctgccagggctctctggggcagagctggagaaggcacacttagctc
tgatagactacctaactcaaaaaagaagtcagctggtgaagaagctaaatgattctgacc
atcagtctagtacctcacccctcatggaaggaacacccacaatcaaatccaaaaagaagc
tgctacaaatcatcgataccaccttgttaaagtgttacctgcatacaaatgtagcactgg
tggcacctttgctacgtctggagaacaatcactgccatattgaggagagtgagcatgtac
taaagaaggcacacaaatatagtgagctgataatactgtatgaaaaaaaaggtctgcatg
aaaaagctttgcaggtactggtggatcagtcaaagaaagccaactctcctttgaagggtc
atgagcggacagtgcaatatctgcagcatttaggcacagagaacttgcacttggtatttt
cctactctggctgggtgctgagagattttcctgaagacggactgaagatatttacagaag
acctccctgaagtagaagctttgccacgagacaaagtgctcagtttcttgatagaaaatt
ttaaaagcttgactattccttatctggaacacatcattcatgtctgggaagaaactggtg
cagattttcacaactgtctgatccagctgtactgtgagaaagtgcagggcttaatgaaag
aatatctcaattctttccctgcagataaaactccagtgcctgctggggaggaaggaggag
acttgggggattaccggaaaaagcttctgctttttctggagaagtctagctggtatgaac
ctagtcgactaattagtgacttcccctttgatggtctcctggaagaacgtgctctgctct
tgggtcgtatggggaagcatgaacaagctctgtttatttatgttcatattttgaaggaca
ccaacatggctgaaaactactgccataaacattatgacagaaacaaagatggcaacaaag
atgtctatttgtcgctgctccggatgtatctgtccccacctagtgttcattgccttgggc
caatcaagatggaagtgctggagcctcaagccaacctgcaggctgctcttcaggttttgg
agctacatcacagcaaattggataccactaaggcaataaacctgcttccagcaaatacac
agattagtgagattcgcatcttcttagagaaagtccttgaagaaaatgctcagaagaaaa
gatttaatcaagtacttaagaatcttctccatgcagagtttctgagggtccaggaggagc
ggatcttgcatcagcaaattaagtgcattattacagaggagaaggtgtgcactgtttgta
aaaagaagataggtaacagtgcatttgctcgataccctaatgcaatagttgtgcattatt
tctgctccaaagaagtcaacacattggatacctga

DBGET integrated database retrieval system