Acanthisitta chloris (rifleman): 103801369
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Entry
103801369 CDS
T08456
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl04140
Autophagy - animal
achl04148
Efferocytosis
achl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103801369 (VPS39)
04148 Efferocytosis
103801369 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103801369 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
achl04131
]
103801369 (VPS39)
Membrane trafficking [BR:
achl04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
103801369 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Lgl_C
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
103801369
NCBI-ProteinID:
XP_009072029
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
EWLLVGTKQGHLLLYRIKKDMGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENN
IYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHE
LQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADG
KVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLV
QSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDD
SDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQ
YPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKL
LQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHE
KALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSGWVLRDFPEDGLKIFTED
LPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKE
YLNSFPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLL
GRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGP
IKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKR
FNQVLKNLLHAEFLRVQEERILHQQIKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYF
CSKEVNTLDT
NT seq
2555 nt
NT seq
+upstream
nt +downstream
nt
aggaatggctccttgttggtaccaaacaagggcatcttctgctttacaggatcaaaaaag
acatgggttgcaataggtttgaagtgacactagagaaatctaacaagaacttctcaaaga
agattcagcagattcatgttgtttctcaatttaaaattttggtcagtctattagaaaaca
acatttatgttcatgacctgttgacatttcaacaaatcactacagtttccaaagcaaaag
gtgcatctctcttcacttgtgatcttcagcagtcagatacaggggaagaggtgctgagaa
tgtgtgtggcagtgcgtaagaagctacagctttatttttggaaggacagagagttccatg
aactacagggggacttcagtgtacctgatgtacccaagtctatggcctggtgtgaaaact
ccatctgtgtaggcttcaagagggactattacttgatacgggtggatggaaaaggatcca
tcaaagaactgtttcccacagggaagcagctggaaccattggtagctcctgtagcagatg
gaaaagttgcagtcggccaagatgatctaacagttgttcttaacgaagaagggatctgta
ctcagaaatgtgccttgaactggacagatattcctattgccatggagcaccagcctccct
acatcatcgctgttctgccaagatacgtggagatccgcacttttgaacctcggctgctgg
tacagagcattgagctgcagagaccacgcttcatcacctctggaggcacaaatattatat
atgtggcaagtaatcactttgtttggcggctcattccagtgtccatagccacccagatcc
agcagcttctgcaggacaaacagtttgagttggctttgcagttggcagaaatgaaagatg
attcagatagtgaaaaacgacaacaaattcaccacataaagaacctctttgccttcaacc
ttttctgccagaagcgctttgatgaatccatgcaagtttttgccaagcttggtacagatc
ccactcatgtgatgggtctgtatcctgacctcctgcccacagattacaggaaacagctgc
aatatcctaaccccctgccagggctctctggggcagagctggagaaggcacacttagctc
tgatagactacctaactcaaaaaagaagtcagctggtgaagaagctaaatgattctgacc
atcagtctagtacctcacccctcatggaaggaacacccacaatcaaatccaaaaagaagc
tgctacaaatcatcgataccaccttgttaaagtgttacctgcatacaaatgtagcactgg
tggcacctttgctacgtctggagaacaatcactgccatattgaggagagtgagcatgtac
taaagaaggcacacaaatatagtgagctgataatactgtatgaaaaaaaaggtctgcatg
aaaaagctttgcaggtactggtggatcagtcaaagaaagccaactctcctttgaagggtc
atgagcggacagtgcaatatctgcagcatttaggcacagagaacttgcacttggtatttt
cctactctggctgggtgctgagagattttcctgaagacggactgaagatatttacagaag
acctccctgaagtagaagctttgccacgagacaaagtgctcagtttcttgatagaaaatt
ttaaaagcttgactattccttatctggaacacatcattcatgtctgggaagaaactggtg
cagattttcacaactgtctgatccagctgtactgtgagaaagtgcagggcttaatgaaag
aatatctcaattctttccctgcagataaaactccagtgcctgctggggaggaaggaggag
acttgggggattaccggaaaaagcttctgctttttctggagaagtctagctggtatgaac
ctagtcgactaattagtgacttcccctttgatggtctcctggaagaacgtgctctgctct
tgggtcgtatggggaagcatgaacaagctctgtttatttatgttcatattttgaaggaca
ccaacatggctgaaaactactgccataaacattatgacagaaacaaagatggcaacaaag
atgtctatttgtcgctgctccggatgtatctgtccccacctagtgttcattgccttgggc
caatcaagatggaagtgctggagcctcaagccaacctgcaggctgctcttcaggttttgg
agctacatcacagcaaattggataccactaaggcaataaacctgcttccagcaaatacac
agattagtgagattcgcatcttcttagagaaagtccttgaagaaaatgctcagaagaaaa
gatttaatcaagtacttaagaatcttctccatgcagagtttctgagggtccaggaggagc
ggatcttgcatcagcaaattaagtgcattattacagaggagaaggtgtgcactgtttgta
aaaagaagataggtaacagtgcatttgctcgataccctaatgcaatagttgtgcattatt
tctgctccaaagaagtcaacacattggatacctga
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integrated database retrieval system