Acanthisitta chloris (rifleman): 103801535
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Entry
103801535 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103801535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achl03000
]
103801535
03021 Transcription machinery [BR:
achl03021
]
103801535
03036 Chromosome and associated proteins [BR:
achl03036
]
103801535
Transcription factors [BR:
achl03000
]
Eukaryotic type
Helix-turn-helix
ARID
103801535
Transcription machinery [BR:
achl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103801535
Chromosome and associated proteins [BR:
achl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103801535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103801535
NCBI-ProteinID:
XP_009072200
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQMPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQPPAQTPHSQPSYQQQ
QQPQSQAPQLQTSQPPYSQQQSQPPHQQSPTPYPQQQSTAQQHPQSQPPYSQQQSQSPYQ
QQQTPQTASSALSQQSSSYPQSQPPQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMASS
KGQDDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFS
PHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMN
QSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSAGQMHAGMGPYQQNSMGSYGPQGGQ
YGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQTGVPPYSGIPPGRMSHAA
MGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQG
GMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKM
NNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNL
PAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLY
AFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLK
PPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMG
RMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYG
GPYDRVRTEPGMGPEGNLGTGTPQPNIMPSTPESGMYSPSRYPQQQQQQQRHDSYGNQFS
TQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGEMYNVPYSAGQGQTQQQL
PPAQPQQPSQQQPAQPSPQQDLYNQYGSTYPSADRRAAAGPQNQFPFQFGRDRVSAPPGS
NAQQNMPPQMMGGPIQSAPESTARKGAMWQGRNEMGYSYPNRQSAGSAPQGPAYHGVTRT
DEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPA
PLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEAT
QPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQL
PGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEDGEEDDEPRS
LNCEEEEEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGR
VQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKRSAAESNLSTREG
EAPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKPLETAKESGKFPFVISPAQSHRNI
KILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILG
KLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLD
LSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSI
GNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFT
LYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccctatggagggaacaacccctacacacag
caacagggacctcaggcagggccacagcaaggacacggctacccaggacagccctatggg
ccacagactccccagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcatatgcacaacagatgcctccttatgggcagcagggccccagtgcatatggg
cagcagagccagactccatattacaaccagcaaagccctcatccccaacagcagcagcct
ccatactcccagcagcctccagcccagacccctcactctcagccttcttatcagcagcag
caacagcctcaatctcaagctccccaacttcagacatcgcagccgccgtattcccagcag
caatcccaaccgccccatcagcagtccccaactccatacccccagcagcagtccacagcc
cagcagcaccctcagagtcagcctccctactcccagcagcagtcacagtcgccgtaccag
cagcagcaaactcctcagacagcttcctcagccctttcccagcagtcctcgtcgtaccct
cagtcccagccgccgcagcagcagtctgcgtactcccagcaacgcttcccccctcctcag
gagttatctcaagactcgtttgggtcccaggcatcatctgctccctcaatggcttccagt
aaagggcaggacgacatgaacttgaatcttcagtccagaccttccagcctgccggacctg
tctggttccatagatgatctgcccatgggtacagaaggagccctgagccctggagtaagc
acatcagggatttccagcagtcaaggagagcagagtaacccagctcagtctcctttctcg
ccacatacctctcctcacctgccaggcatcagaggaccctccccatccccagttggatct
ccagctagtgttgctcagtcccgctctggtccactctcacctgctgcagtaccaggcaat
cagatgcccccccgaccgcccagcggccagtcggacagcatcatgcatccctccatgaac
cagtcgagcatagcgcaggaccgaggttacatgcagaggaaccctcagatgccccagtac
agctccccccagcctggctcagccttatctccccggcaatcctccgcagggcagatgcac
gccgggatggggccgtaccagcagaactccatggggagctacggccctcaggggggacag
tatggacctcaaggaggttatcccaggcagccaaactacaatgccatgtccaatgccaac
taccccagtccaggaatgggaggaagcatgaaccccatgggagcagggagccagatgcat
gggcagactggtgtgccaccatacagtgggattcctccagggaggatgagccatgcagcc
atggggaacagaccttatggacccaacatggctaatatgccaccccaggtgggcacaggg
atgtgccccccgcccggcggcatgaaccgcaaagcacaagaagcagctgctgctgccatg
catgctgctgccaactccatccagaacaggcctcctggttatcccaacatgaaccaaggg
ggaatgatgggcactggacctccttatggacagggaattaacagtatggctggcatgata
aacccccagggcccaccttatcccatgggtgggaatatggctaacaactctgcagggatg
gcagcaagccctgagatgatgggacttggggacgtcaaattaacacctgcaactaaaatg
aacaataaggcagatgggacaccaaaagcagaatccaagtcaaagaagtccagttcctct
accacaaccaatgagaagatcaccaaactctatgagctgggtggtgagcctgagaggaag
atgtgggtggatcgttacttggcctttactgaggagaaggccatgggcatgaccaacctc
ccagcagtgggcaggaaacccttggacctttaccggctctacatctccgtgaaggagatt
ggaggattgactcaggtcaacaaaaacaagaaatggcgtgagttagccacaaatctcaat
gtgggcacgtccagcagtgcagccagttctttgaagaagcagtacatccagtgtctctat
gccttcgagtgcaagattgagcgaggtgaagacccacctccagatatcttcgcagctgct
gattcaaagaagtctcagactaagatacaacctccatctccagcgggttcaggctcaatg
cagggtcctcagacacctcagtccaccagcagctccatggcagaaggaggagacttgaag
ccaccaactccagcatcaacgccacacagtcagatgcctcctttgccaggcatcaggagt
aactccgtgggccttcaggatgcctttgcagatggtagtgatcctacgttccagaaacgg
aactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatgatgggt
cgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccaggaagc
gatcccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttacaatcgt
gctgcaggtccagggatgggtaacatggccatgggacagcggcagcactactcctatgga
ggtccttacgacagagtgaggacagagcctggcatgggacctgagggcaacttggggacc
ggaactccacagccaaacatcatgccttccaccccggagtcggggatgtattctcccagc
cgctacccacagcagcagcagcagcagcaaagacatgattcctatggcaatcaattctcc
actcaaggcacatcctcgggcagccccttccctagccagcaaactaccatgtatcagcag
caacagcagaactacaagcgaccgatggacggcagctacggcctgcccgccaagcggcac
gaaggggagatgtacaacgtcccgtacagcgctgggcagggccagacacagcagcagctg
cctccagcacagccccagcagcccagccagcagcagcctgcacagccatcaccccagcag
gacctgtacaaccagtatgggagcacatacccctctgctgaccgccgagccgccgccggg
ccgcagaaccagttcccattccaattcggcagagacagggtctcggctcccccgggttcc
aatgctcagcagaacatgcctcctcagatgatgggtggtcccatccagtctgctccagag
tccacagccaggaaaggagccatgtggcagggccgcaacgagatgggctacagctacccg
aaccggcagagcgcgggctctgcgccgcagggccccgcgtatcacggagtgactcggacg
gatgaaatcctgcattcggaccagagggtcaaccacgagggaccatggccttcccacggc
aaccggcaacctccctacggcccctctgcccccgtgcccccaatgactaggcctccccag
tctaactaccagaccccccctagcatgcagaatcacattcctcaggtatccagcccagca
cctctgcccagacctctggagaatcgcacttctcctagtaaatctccattcctgcactcg
gggatgaagatgcagaaggcaggacctcccgtccctgcctcacacataacaccagcagct
gtacagcctcccatgatccgacgggacatcaccttcccgccgggctcagtagaggccaca
caacctgtgttgaagcagaggagaaggctgacagcaaaagatatcggaactcctgaagcc
tggagagtgatgatgtctctgaagtctgggctgctggctgagagtacgtgggccttagat
accataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctg
ccagggttgctggaactcttggtggagtatttccggcgctgcctgatcgagatctttgga
atcctgaaggaatacgaggtaggagacccagggcaaagaacactattagatcctgaaagg
ttctgcaaatcttcagcttcttcccctgaagacggggaggaggatgatgagccacggagc
ctgaactgtgaggaggaagaagaggacgaggaagaggaggaggccgcgttttcgagcaag
gacaaagtacctctagagagcagcgaggagaaactagttagtaaatttgacaagcttcca
gtgaaggtggtgcagaagaacgacccctttgtggtagattactcagacaagctggggcgg
gtgcaggagttcgacagtggattgctgcactggcggatcggcggcggcgacaccaccgag
cacatccagacccacttcgagagcaagacggagctgcccttgcctcataaacgagcttcc
tgctcctctgccctgaggaaacgctcagcagctgagagcaacctgagcaccagggaagga
gaggctcctccatccgacagctcctcggagaagaggataactgccaccatggatgacatg
ctgtcggcacgtccaggctccctggcaggagaggaggaagaggtcaaacctttggaaacg
gcgaaggaaagcggcaagtttccctttgtcattagtccagctcagagccacagaaatatc
aaaatcctggaggatgagcctcacagtaaggatgagacgccgctgtgcaccctcctggac
tggcaggactctctggccaagcgctgcatctgcgtctccaacatcatcaggagtttatcg
ttcgtgccgggcaatgactttgagatgtccaaacaccccgggctgctgctgattctaggg
aaactgattctcttacaccacaagcatccagaacgcaaacaggcacccctgacctacgag
aaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgt
ttggagatgctgcgtgaaaatacgctggtcacgttggccaacatttctgggcagctggac
ctctccccttacccggaaagcatctgtttgcctatcctggatggactcctccattgggca
gtgtgtccatcagcagaggcccaggatccctttccgacactgggacccaacgcggtcctc
tcccctcagagactggttttggaaacactcagcaaactcagcatccaggacaacaacgtg
gatttgatcctcgcgactcctcccttcagccgcttggagaagctgtacagcaccatggtg
aggttcctcagtgacagaaagaacccggtgtgccgggagatggccgtggtactactggcc
aacttggcacagggggacagcctggcagcgagagccatcgctgtgcagaagggcagcatt
ggcaacttgctgggcttcctggaggacagcctggcagccacgcagttccagcagagccag
gctgggctgatgcacatgcagaaccctcccttcgagtcgacgagcgtggacatgatgcgc
agagccgctcgggccctgctggccctggccaaggtggacgagaaccactcggagttcacg
ttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggtttca
caagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
