Acanthisitta chloris (rifleman): 103801673
Help
Entry
103801673 CDS
T08456
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103801673 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103801673 (NUP54)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103801673 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
KRTAP
XhlA
Motif
Other DBs
NCBI-GeneID:
103801673
NCBI-ProteinID:
XP_009072348
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MLQLFFPAPAFSPPELTFPCSFSASRSSGFGGIETANSTASGFNFGGFGLAANPAVNFNI
GNFGVATTSTPPFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTGGLFGATQNKG
FGFGTSFGSGAGTGLGSGLGTGLGFGGFGTQQQQQQSTLGSGLFSQPAQAPAQSNQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSL
MPNNKDEDGLVVLVFNRKETDIRSQQQQLVESLHKILGGNQSLAVNVEGVKTMPDDQTEV
IIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNP
PAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISE
LQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCE
LNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYMDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLIEHGLNESIPIRAGVFS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcttttcttccctgcgcctgccttttcccccccagaactaacgtttccttgc
tctttctctgcttcccgctcatcaggatttggtgggattgagactgcaaactccactgcc
agtgggtttaattttgggggtttcggattagctgctaaccctgcagtgaattttaatatt
gggaatttcggtgttgccactacctcaactccaccattcaattttggtaacagtctggcg
agtgcaggtgcctttggaggatttgggacaaccaccaccactgcagcaccagcctttagt
ttttctgctcccaccaacacaggcactggcggactctttggtgctacccagaacaaaggc
tttggatttggtaccagctttggctcaggagctggaactgggctgggtagtggcttggga
actgggctaggctttggaggcttcggaacacagcagcagcagcagcaaagcacgctggga
agtggcttgttcagccagcctgcccaggcacccgcccagtccaaccagctcatcaacact
gccagtgccctgtcagctccgacgctgctgggggacgagagggatgctatcctggccaag
tggaaccagctgcaggccttctggggaacaggcaagggctacttcaacaacaacatcgcc
ccagtggagttcacgcaggaaaaccccttctgcaggtttaaggctgtgggttacagttta
atgcccaacaacaaagatgaagatggcctcgtggtgctggtgttcaacaggaaagaaaca
gatatccgcagccaacagcagcagctggtggagtccctgcacaaaatcctgggagggaac
cagagcctcgctgtcaacgtcgagggtgttaaaaccatgcccgacgaccagacagaagtg
atcatttacgtggtggagcgctcgcccaacggcacttccaggagagttcctgccacgacc
ctctacgcccactttgagcaagccaacatcaagtcatccctgcagcaactgggggtcagc
ctctccatggccaggacagagctgtccccagcacaagtcaaacagctcctgcagaaccct
cctgctggtgttgatcctattatatgggaacaagccaaagtggataatcctgatcctgac
aagcttattcctgtgccaatggtgggtttcaaggagctgttgagaagattaaaggtccaa
gatcagatgaccaaacagcatcaaactcgattagatataatatcagaagatatcagtgag
ctgcagaaaaaccaaacaacaaccatggcaaagattgcacagtacaaaaggaaactgatg
gccctttctcacagaacattacaggtgttgataaagcaggagatccaaaggaaaagtggt
tacgccattcaggcagacgaagagcagcttcgtgtccagctggatacaatccagtgtgag
cttaatgcacctacacagttcaagggcagactgaacgagctcatgtcccagatcaggatg
cagaaccacttcggggcagtgcgggctgaggaacgttactacatggacgcagatctcctg
cgggaaatcaagcagcatctgaagcagcagcaggaagggctgagtcacctcatcagcatc
atcaaggacgacctggaggacatcaagctaatagaacacgggctgaacgagagcattccc
atcagagcaggagtcttcagctga
DBGET
integrated database retrieval system
