Acanthisitta chloris (rifleman): 103802202
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Entry
103802202 CDS
T08456
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103802202 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achl03041
]
103802202 (DHX8)
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103802202 (DHX8)
Spliceosome [BR:
achl03041
]
Complex C
Other components
Step II factors
103802202 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
Transformer
T2SSE
AAA_16
nSTAND_NTPase5
PhoH
TsaE
Sigma54_activ_2
ABC_tran
Cas3-like_C_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
103802202
NCBI-ProteinID:
XP_009072902
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MRPPAKPSTSKESAVKPKSEKEKLRELYPALCRPDNPNIRNMLDEDDVKVAADALKELEA
LMPSADRQSKQRGSDHRAKKRKRSRSHSRDRKRRHRSRSRSRSRTRDKHRGKSRYRSRSR
SWSPSRDRKDREKYIEKSHERWRDKHIDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGL
RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLN
PNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIA
ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN
PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG
IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI
GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK
RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI
HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR
AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD
APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT
IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI
QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL
IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT
KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctcctgcaaagccatctacgagcaaagagtcagctgtcaagcccaagtcagag
aaagaaaagttgagggaattgtatccagccctttgcaggccagacaatcccaacatcagg
aatatgctggatgaagatgatgtgaaagtggcagctgatgccctgaaagaactcgaagct
ctaatgcctagcgcagacaggcagagcaagcaaaggggcagtgaccaccgggcgaagaaa
aggaagaggagccgaagtcatagcagggacaggaagcgaagacacagatctcgctctagg
tctcgttccaggactcgggataagcacaggggaaaatccagataccgatcaaggagtaga
agttggagtcccagcagggaccgtaaggatcgagaaaagtacatcgagaagagccacgag
agatggagagacaagcacatagaccgtccaccacctgaggagcctgccatcggagacatt
tacaatggcaaagtcacaagtataatgcagtttggatgctttgtgcagctggaaggccta
aggaagcgctgggagggcttggtccacatctcagagctgcgaagagaaggacgagttgct
aatgttgccgatgttgtgagcaaaggacaaagagtgaaagtcaaggtgttatcctttact
ggatccaaaaccagtctaagcatgaaggatgttgatcaagacactggggaagacctgaac
ccaaatcggagaagaaacctggttggagaaaccaatgaagaaacctctatgagaaacccg
gacagacccagtcacctgtccctggtgaatgccccagaggtggaggacgacagccttgaa
cggaagcgcctcactcgaatttcagacccagagaaatgggagataaagcagatgattgca
gctaatgtgctttccaaggaagagtttcctgactttgatgaggagactgggattcttcct
aaagttgatgatgaagaagatgaggaccttgagattgagttagttgaagaagagccacca
ttccttcgaggtcacaccaaacagagcatggatatgagtcccattaaaatagtaaagaat
ccagatggttccttgtcgcaggctgcaatgatgcagagtgctttagctaaagagaggcga
gagcttaaacaagcccagagagaagcagagatggattctatccccatgggcctcaacacg
cactgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggt
attgggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaacaaa
gcttcttatggtaaaaagacccaactttccatcattgaacagagagagagtctcccaatc
ttcagactaaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttatc
ggagagacgggatctgggaaaacaacacagattacccaatacctcgctgaggcagggtat
acctcaagaggaaagattggatgtactcagcctcgccgagtggctgcaatgtctgttgct
aagagagtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattcga
ttcgaagactgcactagccctgaaactgtcatcaaatacatgacagatgggatgttactg
agggagtgtttgatagatcctgatctgacccagtatgccattatcatgctggatgaagcc
catgagaggacaatacatacagatgtgctctttggactcctgaagaagacagtgcagaag
cggcaggatatgaagttgatagtgacatcagccacactggatgctgtgaaattctctcag
tatttctacgaagcaccaatcttcacaattcctggcagaacatatccagtagaaattctg
tacacaaaggagccagagactgattatttggatgccagtctgattacagtaatgcagatc
cacttaacagagcccccaggtgacattttggtgtttctaactggtcaggaagagattgat
actgcctgtgaaatcctctatgaaaggatgaaatctctaggacctgatgttccagagtta
attatcctgccagtatattcagctttacccagtgaaatgcaaaccaggatctttgaccca
gccccaccaggaagcagaaaggttgtcattgccactaacattgcagagacatctttgact
attgatggaatatattacgtagttgatcccggttttgtgaagcagaaagtgtataattcc
aagactgggatcgaccagctggtggtgacaccgatttcccaggctcaagcgaagcagcgt
gcaggaagggctgggagaacgggcccaggaaaatgctacaggttatatacagagcgtgcg
tatcgagatgagatgctaaccaccaacgtgcctgaaatccagagaacaaatctggccagc
acagtgctttccctcaaggctatgggcatcaacgatttgctctcctttgactttatggat
gctcccccaatggaaactctcataactgccatggagcagctctacaccctgggagctctg
gatgatgagggactgctcactcgacttgggcgcaggatggcagaattccccttggagcct
atgctgtgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgctgacg
atagtctccatgctgtctgtgcagaacgtgttctacaggccaaaggataaacaggcactt
gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcaccctgctggct
gtgtacaattcttggaagaataataaattttcaaatccctggtgctatgaaaattttatc
caggcccgatccttacgcagggcacaggatattcgcaagcagatgttgggcattatggac
aggcacaagctggatgtggtatcctgcgggaaggcaacagttcgggtccagaaggccatt
tgtagtggcttcttccgaaatgcagctaagaaggatccccaggaaggttatcggacactc
attgaccaacaagtagtctatatccacccatccagtgccctcttcaacaggcagccagaa
tgggtggtgtatcatgaactggttctgaccaccaaggaatatatgcgtgaagtgacaact
attgatccacgctggctggtggaatttgcaccagctttcttcaaggtttctgatcccacc
aagctgagcaagcagaagaagcagcagcggctggagcccctgtacaatcgctacgaggag
cccaatgcgtggaggatatcccgtgcattcaggcggcgatga
DBGET
integrated database retrieval system
