Acanthisitta chloris (rifleman): 103802339
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Entry
103802339 CDS
T08456
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103802339 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
achl03019
]
103802339 (HBS1L)
Messenger RNA biogenesis [BR:
achl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103802339 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
MMR1
Motif
Other DBs
NCBI-GeneID:
103802339
NCBI-ProteinID:
XP_009073048
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
KTRDSQSARMECEIVPKITKMTVSGKKQSMGFEVPCATAEENGHTNTPQKGLLPEDASAA
SGVLAAVSKSTLSPQVVQVSEEQNTVPPPGKKSSKAKPQIDVKAELEKRQGGKQLLNLVV
IGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVT
MDVGMTKFETPTKVITLMDAPGHKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQ
TREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQFLKQAGFKDSDVAYIPTS
GLGGENLVTRGQSSDLTQWYTGKCLLEQIDSFKPPQRSVDKPFRLCVADVFKDQGSGFCV
TGKIEAGYVQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVG
CVFCDPKEPIKVCTRFRARVLIFNIEVPVTKGFPVLLHYQTVSEPATITRLLSVLHKSTG
EVTKKKPKFLAKGQNALIELQTQRPVALELYKDFRELGRFMLRYSGSTIAAGVVTEIKE
NT seq
1622 nt
NT seq
+upstream
nt +downstream
nt
gaaaaacaagggattcacagtcagccagaatggaatgtgaaattgtgccaaaaattacca
aaatgacagtgtctggaaagaaacaatctatgggatttgaagttccatgtgcaactgctg
aagaaaatggccatactaacacacctcagaaaggactgttacctgaagatgccagtgcag
cttctggggtacttgcggctgtctcaaaatctactctttcaccccaagtagtgcaggttt
cagaagagcagaatacagtacctcctccaggaaaaaagtcaagcaaggcaaaaccacaaa
tagatgtgaaagcagagttggagaagagacaaggaggaaagcaactgcttaatttagtgg
taataggacatgttgatgcaggtaaaagtactttaatgggtcatttgctctaccttttgg
gaaatgtgaacaaaagaactatgcacaaatacgaacaggaatctaagaaggctggcaaag
cttcgtttgcctatgcgtgggtcttggatgaaactggtgaagaaagagaaaggggagtga
caatggatgtgggcatgaccaaattcgagacaccaactaaagtaattacactgatggatg
ctccaggccataaagacttcattccaaatatgatcacaggagctgcacaggctgacgtgg
caattttggttgtggatgctagcagaggagagtttgaagcagggtttgagacaggtggac
aaactcgagaacatggattgctagtgcgctccctgggtgtgacacagctagctgttgcag
tcaataaaatggaccaggtcaattggcaacaggaaagatttcaggaaattacgagtaagc
ttggccagtttcttaaacaagctggctttaaggactcagatgtggcttatatcccaacaa
gtggccttggtggtgaaaatctagtcacaaggggtcagtcaagtgacctcacacagtggt
atacaggaaagtgtttgctagagcaaattgattctttcaagccaccacagagatcagtgg
ataaaccatttaggttgtgtgttgctgatgtttttaaagaccaagggtcaggattttgtg
tgactggtaaaatagaagcaggctatgttcaagttggagaacgacttctggcgatgcctc
ccaatgaaacttgcactgcaaaaggaatcacactgcatgatgaaccagttgattgggctg
cagcaggagatcacgttagtctcactttgaccggcatggatatcatcaaaatcaatgtgg
gctgtgtgttttgtgatcccaaggaacccattaaagtttgcactcggttcagagctcggg
ttctcatcttcaatattgaggttccagtcactaaaggatttcctgtgcttttacactatc
aaacagtaagtgaacctgctactattacaagactgttgagcgtcctgcacaaaagcactg
gtgaagtgacaaagaaaaaacctaagttcttggctaaaggacagaatgctctaatagaac
tacaaactcaaagacctgttgctctagagttgtataaagattttagagagctggggaggt
ttatgttacgctacagtggttccactattgctgcaggagttgttacagagattaaagaat
ga
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