Acanthisitta chloris (rifleman): 103803043
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Entry
103803043 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
achl04147
]
103803043
00535 Proteoglycans [BR:
achl00535
]
103803043
00536 Glycosaminoglycan binding proteins [BR:
achl00536
]
103803043
Exosome [BR:
achl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103803043
Proteoglycans [BR:
achl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103803043
Glycosaminoglycan binding proteins [BR:
achl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103803043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103803043
NCBI-ProteinID:
XP_009073825
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MNGHQSLRLPNQRVDNSVDPPLSDNSSPLEFDLLTATVRLYGSSSTGLASFFPGLMLTAG
SCLPIPTHLPFCSVLGTSHVRLPNYLRHGSEEEIQAALHEWEGLLESRCHRYLEWFLCLL
LLPGCSTSVPVTPPPCQGFCEAVRDLCWMHLAGGRLPLPVPCDALPEEDEGYSCVFINAS
AGCVPPPATQNLSTEVSLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTGQVARYHLPS
PFYRDFSLLFHIQPTTPRAGVLFAVTDSSQSIIYVGVKLSELRAGKHQIIFYYTEPGSPS
SYPAATFTVPTLLNQWTRFAISVEEDEVILYLDCEEHERVRFERSPDEMELEDGSGLFVA
QAGGADPDKYQGVIADLRLEGDPRAAERQCEEEEDDVEVSGDFGSGAEGGHHPSGKVGGV
PGLVDAVPVTSPPVAGGNGPRSSGGSPQQAERTRAEETLRVSTGGTGPKGEKGEKGERGL
KGDSGTGGVVGTDSVKGQKGEKGDLGIKGSAGFGYPGSKGQKGEPGDPGPPGTLSRHTDG
TVVEQVTXPGPPGKEGAPGRDGEPGDPGEDGKPGDMGPQGFPGMPGEPGLKGEKGDPGMG
PRGPPGPPGPPGPPGPSSKNDKLTFIDMEGSGFGGDLETLRGPRGPPGPPGPPGVPGLPG
EPGRFGMNHTDLPGPPGLPGRDGMPGPPGPVGPQGPPGRDGEAGQPGPKGERGDVGDLGL
PGVPGPKGNKGEIGPAGPPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPGYEAGFGDMEGS
GLSFTPGPPGPEGPQGMPGLPGVKGEVGSPGQPGLPGPKGDAGVPGMDGRPGLEGFPGPQ
GPKGDKGSPGEKGEQGQDGVGLPGPPGPPGPPGQIIAVSSEDKSLVAFPGPAGRPGHAGF
PGPVGPKGDQGSTGPQGSPGLKGEKGEPGVIISPDGTVVTAKVKGEKGEPGLRGPMGPSG
PQGQAGMKGEIGFPGRPGRPGMNGLKGEKGDPADMRGLQGPPGPPGPPGPPGSIVYNSGN
TFSDSSHPALPGFPGFHQFPGQKGEKGDVGPPGPPGHFPCAPSHFGANLRGDKGDAGPKG
EKGEPGTTPPYGPSVSGLPGPPGPQGYPGLPGPKGDSIVGPPGPPGPQGPPGIGYEGRQG
PPGPPGPPGQPSFPGPHRQDLSVRLRGGFRRVLLEEHNLIPSSALDNEVYDKPPTIHYAG
PQPREPLHPLRNHVPLPTARPWRGDEVVANQHHLPEQPLLHHQHELLNSYYIHRRPDPAP
VAAHVHQDFQPALHLVALNAPLSGGMRGIRRRXXXXXXXGADFQGFQQARQVGLAGTFRA
FLSSRLQDLYSIVRRADRTAIPIVNLRDEVLFNNWEALFTGSGAPLRAGARILSFDSRDV
LRDAGWPQKSVWHGSDARGRRLPESYCETWRTEERASTGQASSLASGKLLEQAASSCQQA
FIVLCIENSFMTAAKK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcaccagagcctccgtttgcctaaccagagggtggataacagtgtggatcct
cctctttctgataactccagtcctcttgagtttgatttactaaccgccactgtgcgactc
tacggtagtagcagcacggggctcgcatccttctttcccggactgatgctaacagctggc
agttgcctgcccatcccgacccacctgcccttctgcagtgtgctgggcaccagccatgtc
cggttaccaaattacctccgccacggcagcgaggaggaaattcaggcagctttgcatgag
tgggaggggctacttgaatcgcggtgccatcgctacctggagtggttcctctgcttgctg
ctgctccctgggtgtagcacctcggtccccgtaacccccccaccgtgccaaggcttctgt
gaggccgtccgagacctgtgttggatgcacttggctggggggcgcctgcctctgcctgtg
ccttgtgatgctctccctgaggaggatgaagggtattcttgtgtctttattaatgcttct
gcaggctgtgttccaccaccagccacccagaacctgagcactgaggtcagcctcctggag
ctgatcggagacccaccaccagaggagatcctcaaaatttatggccctgacaacaaccct
ggctatgtctttggtcctaatgccaacacaggccaggtggctcggtaccacctgccaagc
cctttctaccgggacttctccctcctgttccacatccagcccaccaccccacgggctggg
gtgctctttgctgtcacggactcttcacagagcatcatctatgtgggcgtcaagctctca
gagctgcgggcgggcaagcatcagatcatcttctactacacagagccgggctcaccgagc
tcatacccagcagccaccttcactgtgcccaccttgctcaaccagtggacacgctttgcc
atcagtgtggaggaggatgaagtcatcctctacctggactgcgaggagcatgagcgggtc
cggtttgagcgctccccagatgagatggagctggaagatggctctggactctttgttgct
caggctggaggggctgacccagataaataccagggggtgattgctgatctgaggctcgaa
ggggacccacgggcggcagagcgccagtgtgaggaagaggaggatgatgtggaggtctcc
ggtgatttcggcagcggggcagaaggtggacatcatccctccgggaaggtcgggggtgtc
ccaggactggtggatgctgtccctgtcacctctccccccgtggcagggggcaatgggcca
aggagcagtgggggatccccgcagcaagctgagaggaccagagcggaggagacactgcga
gtctccacgggaggcaccggccccaaaggcgaaaagggagagaagggcgaacgtggcttg
aaaggggattcagggactggtggtgtcgtggggacagacagtgtcaagggccaaaagggg
gagaaaggagacctcggcatcaagggcagtgctggatttggctaccctggctctaagggc
caaaaaggggaaccaggtgaccctggcccccctggcaccctctcacggcacactgatggc
acagtggtggagcaggtcactnncccagggcccccgggcaaagagggagcccctggaagg
gatggcgagcctggagatcctggcgaggatggcaaacctggtgatatgggacctcagggg
ttccctgggatgccaggagagccagggctgaagggggagaagggtgacccaggtatggga
ccaaggggcccccctggaccacctggccccccaggaccaccgggaccctcctccaagaat
gacaagctgaccttcatcgacatggagggctctggctttggcggtgacctggagaccctg
aggggtccacgagggccacctggtcccccagggccacctggagtgcctggtttgccagga
gagccaggacggtttggaatgaaccatacagacctgccaggaccaccggggctaccaggg
agagatgggatgcctggacccccggggccagtgggtcctcagggtcctcctggaagagac
ggggaggctgggcagccagggcccaaaggagagcggggcgacgtgggtgacctcggcctc
cctggtgtaccaggacccaagggcaacaaaggagaaataggaccagcaggacctccagga
gaaatgggcttagctggccttcccgggcccatcggaccccgagggcagccagggcccccc
gggcccccgggcccgccaggcccaggctacgaggctggatttggtgacatggaaggctca
gggctgtcattcacccctggaccacctggacctgaaggaccacaggggatgccaggactg
ccaggagtgaagggtgaggttggcagccctggacagccaggcttgccgggaccaaaggga
gatgctggtgtgcctggcatggatggacgccctggcctggagggcttccctggaccgcag
ggacccaaaggtgacaaaggcagccccggcgagaagggagagcaaggccaagacggtgtg
ggactgcctggtccccctggtccacctggtccccctggacagatcattgctgtctcaagt
gaagataaatctttggtggcttttcctggtccagcgggcagaccaggccacgctggcttc
ccgggtccagtgggaccaaaaggagaccaggggtcaactggtccccagggctccccgggg
ctgaagggggagaagggagagcctggtgtcatcatcagccctgatgggactgtggtcact
gcaaaggtgaaaggagaaaagggggagccaggactgcgggggccaatgggaccatcgggt
cctcagggacaagcagggatgaagggagagatcggctttccaggcagacccggacgtcct
ggcatgaacgggctgaagggtgagaagggtgaccccgcagatatgcggggcttgcagggt
cctccagggccccctgggccgcctgggccacctggaagcatagtctacaacagtggcaat
accttcagcgactccagccatcctgcactgccagggttccctggtttccaccagttccca
ggacaaaagggagagaaaggtgatgtgggacccccaggaccccccggccacttcccttgc
gcccctagtcactttggtgccaacctgcggggtgacaagggggatgcaggtcccaagggt
gagaagggagagccgggcaccactccaccctacggtcccagtgtctctgggctgccaggg
cctccagggccccagggataccccggactgccgggtcccaagggagacagtattgttggg
ccaccggggcctcctggacctcagggccctcctggtattggatatgagggacggcaaggc
ccccctggccctcctggcccccctggtcaaccctccttcccaggtccccacagacaagac
ctctccgtccgcctgcgcgggggcttccgacgggtgctgctggaggagcacaacctgatc
cccagttcggctctggacaacgaggtgtatgacaagccacccaccattcactatgctggc
ccccaaccccgcgagcctttgcaccccctccgcaaccacgtccccctgcccaccgcccga
ccctggcgcggggatgaggtggtagccaaccaacaccacctgcctgagcaacccctgctc
caccatcagcatgagctcctcaacagctactacatccaccgccggccagatccagcccct
gtggccgcacacgttcaccaggatttccagcctgctcttcacctggtggctctgaacgcc
ccgctgagtggcggcatgcgtggcatccggcgccgatnnnnnnnnnnnnnnnnnnnnggc
gccgatttccagggcttccagcaagcccggcaggtcgggctggccggcaccttccgtgcc
tttctgtcctcccgcttgcaagatctctacagcattgtgcgcagggccgaccgcaccgcc
atccccattgtaaacctccgggatgaagtgctcttcaataactgggaagcccttttcacg
ggcagtggggccccgctgcgagctggtgcccgcatcctctcctttgacagccgggatgtc
ctgcgggatgcaggatggccacagaagagtgtctggcacggctcagatgccaggggccgg
cgtttgcccgagagctactgtgagacgtggcggacggaggagcgtgccagcaccggtcag
gcttcctcacttgcctccggaaaactgctggagcaggcagccagcagctgccagcaggcc
ttcatcgtcctctgcatcgagaacagcttcatgaccgccgccaaaaagtga
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