KEGG   Acanthisitta chloris (rifleman): 103803402
Entry
103803402         CDS       T08456                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl03030  DNA replication
achl03410  Base excision repair
achl03420  Nucleotide excision repair
achl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:achl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103803402 (RFC4)
   03410 Base excision repair
    103803402 (RFC4)
   03420 Nucleotide excision repair
    103803402 (RFC4)
   03430 Mismatch repair
    103803402 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:achl03032]
    103803402 (RFC4)
   03036 Chromosome and associated proteins [BR:achl03036]
    103803402 (RFC4)
   03400 DNA repair and recombination proteins [BR:achl03400]
    103803402 (RFC4)
DNA replication proteins [BR:achl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103803402 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103803402 (RFC4)
Chromosome and associated proteins [BR:achl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103803402 (RFC4)
DNA repair and recombination proteins [BR:achl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103803402 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103803402 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_30 AAA_16 AAA_22 AAA_11 DUF815 Mg_chelatase SLFN-g3_helicase AAA_24 AAA_14 AAA_28 RuvB_N AAA_19 AAA_5 TIP49_C DNAX_ATPase_lid ResIII AAA_7 AAA_23
Other DBs
NCBI-GeneID: 103803402
NCBI-ProteinID: XP_009074200
LinkDB
Position
Unknown
AA seq 354 aa
SSISTKPLAAKEKSAAGSSGEGKRTKPIPWVEKYRPKNVDEVAFQDEVVAVLKKSLEGAD
LPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVIREKVKAFAQLT
ASGTRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYISRIIEPL
TSRCSKFRFKPLSDTIQQQRLLDVAEKEHVKISNEAVSYLVKVSEGDLRKAITFLQSATR
LMGGNEITEKIVTEIAGVIPKETIDELLLGCQSASFEKLETLAKNLINEGFAVAQLVNQL
HDTVVESEDYSDKQKSAIVEKLAEVDKCLADGADEYLQLMSLFALVMQQLTQNT
NT seq 1065 nt   +upstreamnt  +downstreamnt
tcttccatcagcaccaagcccctcgctgccaaggagaagagcgcggcgggcagcagcggg
gagggcaagaggaccaagcccatcccctgggtggagaaatatcgccccaaaaatgtggat
gaagttgcattccaggatgaagttgttgctgtgctgaagaagtccctggaaggtgctgat
ctccccaatctgttgttctatggcccacctggaactggaaagacatccactattttagca
gctgctagagaactctttgggcctgaattattccggcagagagtcctggagctgaatgct
tcggatgagcgcgggatacaggtgattcgggaaaaagtgaaggcgtttgctcagctaact
gcgtctggaacccgttcagatggtaaaatgtgtcctcctttcaaaattgtaatcctggat
gaagcagattcaatgacttcagcagcacaggcagccctgaggcgcacaatggaaaaagaa
tctaaaacaacacgtttctgtctaatttgtaactacatcagcagaataattgaaccttta
acctctcgatgctccaaatttcgcttcaagcctttgtcggatactatccaacagcagagg
ctgttggatgttgctgagaaggagcatgtgaaaatcagtaatgaggcagtatcatacctt
gtgaaggtgtcagagggagacttgagaaaagcaattacttttcttcaaagtgccactcgc
ctaatgggtgggaatgagatcacagagaagatagtcactgaaattgctggggtcatccct
aaagaaacaattgatgaactgctcttgggctgccagagtgcatcctttgagaaactggaa
acactggcaaagaatctcatcaatgaggggtttgctgttgctcagcttgtaaaccaactg
catgacacagttgtggagagtgaagattacagtgacaagcagaaatctgccatagtcgag
aaacttgcagaagtggacaaatgcctggcagatggtgctgatgaatacttgcagctgatg
agtctctttgcccttgtgatgcagcagctcacacagaacacctga

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