Acanthisitta chloris (rifleman): 103803895
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Entry
103803895 CDS
T08456
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
achl03009
]
103803895 (IGHMBP2)
03012 Translation factors [BR:
achl03012
]
103803895 (IGHMBP2)
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103803895 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
103803895 (IGHMBP2)
Ribosome biogenesis [BR:
achl03009
]
Eukaryotic type
Other ribosome biogenesis factors
103803895 (IGHMBP2)
Translation factors [BR:
achl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103803895 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Viral_helicase1
ResIII
NAT10_TcmA_helicase
zf-AN1
nSTAND3
DEAD
SLFN-g3_helicase
UvrD-helicase
Flavi_DEAD
AAA_16
AAA_22
nSTAND_NTPase5
AAA_25
DUF7205
ABC_tran
AAA
IstB_IS21
Tricorn_N
DAP3
cobW
T2SSE
DnaB_C
PhoH
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
103803895
NCBI-ProteinID:
XP_009074723
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
AWQESISLKELQRRGVCLLKLQVTSQRTGLYGRLLVTFQPRKWDSDAELPSNSFGPGDIV
GLYDSAGQGDPLCTGVVTRVTSKAVTVALEESREGTLSVDRECSFRLLKLANDVTYNRLK
RALTALKQYRGGPASDLIDVLFFASAPSAFSETKPLKFFNASLDTSQREAVSFSLAQREL
AIIHGPPGTGKTTTLVEIILQAVHQGLKVLCCAPSNVAVDNLVERLAGSKVHILRLGHPA
RLLEPIQQHSLDAVLAHGDNAQIVADIRKDIDQAWAKTKKAQDKGERSHFLSEIKTLRKE
LKEREEAAMAAALTHASIVLATNTGASSDGPLKLLPENHFDVVVIDECAQALEASCWIPL
LKAPKCILAGDHKQLPPTIISHKAAAAGLSLSLMERLAGHYGAQEKNRMHQAIMEWASME
LYGGHLTAHPSVAQHLLRDLPGVISTEETTIPLLLIDTAGCGLFELEVEEEQSKGNPGEV
QLAGLHVQALMDAGVKAKDIAVVAPYNLQVDMLREHLCHSHPELEIKSVDGFQGREKEAV
ILSFVRSNKKGEVGFLAEERRINVAVTRARRPVAIICDSHTVGSQPFLRRLLEHLTQHGQ
VRSAFEYLDDLVPENYSGQGQGERQHSPKPRVASNPKPQPAPGKKHKAGAASQKPGARSS
PSTTRPRREETKDVADRFRAMLAAFLASSEVQLDFPPSLSSHDRMVVHQLAEEQGLQHLS
TGEGRDRYLSVRKREPTEPSLPTAVPHTEQPLPQPLPQPLAQPLPQPQHPSRNTPVPAEL
GESSEGSGKVDLKSLHLERVQREKARREETLRKVQEPSAGSRKKDKSEAKGKPVVKSEAE
EDFDALISAAIKADRTCGFPHCKATVTTLGQLCHHCNRCYCLSHHIPEVHGCGEKAKAHA
RQRISREGILYPGSGSKDKSLDPAKRAHLQRRLDKKLSEMTSQRKGKKKDKEK
NT seq
2863 nt
NT seq
+upstream
nt +downstream
nt
ggcatggcaagagagcatctccctgaaggaactgcagcggagaggtgtctgtctgctcaa
gctccaagtcaccagccagagaactggcctctacgggcggctcctcgtgacattccagcc
caggaaatgggattcggatgctgagctgccctccaacagttttgggcctggggacatcgt
ggggctctatgattcagctgggcaaggtgacccactgtgcacgggtgtcgtgacacgtgt
cacctccaaagcagtgacagtggccttggaggagtcccgtgagggcacactgagtgtgga
ccgggagtgctccttccgcctgctcaagctggccaatgatgtcacctacaacaggctgaa
aagagctttaactgcccttaagcagtaccgtggtggtccagcctccgacctgattgatgt
cctcttctttgcctctgctccaagtgcattcagtgaaacaaagcctctgaaatttttcaa
tgcctctctggacacatcacagagagaagctgtctccttctccctggctcagagggaact
cgccatcatccacggaccacctggcacagggaagaccacgaccctggtagagatcatcct
gcaagctgtccaccaaggtctgaaggtgctgtgttgtgccccttccaatgtggcggtgga
taacctggtggaacgtctggctggctccaaggtccacatcctgcggctgggacaccctgc
tcgcctccttgagcccatccagcagcattccctggatgcagtcctggcccatggggacaa
tgcccagatagtggcagatatcaggaaggacatcgaccaggcctgggcaaaaaccaaaaa
ggcccaagacaagggagagcgaagccattttctcagtgagattaagacactgaggaagga
gctgaaggagcgagaagaagctgccatggctgcagccctgacccatgccagcattgtcct
tgccaccaatacaggtgcttcctctgatggccctctgaagctgctgcctgaaaaccactt
cgatgtggtggtgattgatgagtgtgctcaggccctggaagccagttgctggattcctct
gctgaaggctcccaagtgcatcctggctggggatcacaagcagctgcctcccaccatcat
ctcccacaaggctgcggccgcggggctgtcgctgagcctgatggagcggctggcggggca
ctacggggcgcaggaaaaaaaccgcatgcaccaggccatcatggagtgggcatccatgga
gctgtacggcggccacctcactgctcacccctctgtggcacaacaccttctcagggacct
gccaggagtcatctctacagaagagaccaccattcccttgttgcttatagacactgctgg
ctgtggcctgtttgagctggaagtggaggaagaacagtccaaggggaatccaggagaggt
gcagctggctgggctgcatgtccaggccttgatggatgctggagtgaaggcaaaggacat
tgctgtggtggccccctacaaccttcaggtggacatgctacgagagcacctttgccacag
ccaccctgagctagaaattaaatcagttgatggtttccaaggaagagagaaagaggcagt
gatcctgtcctttgtgagatccaacaagaaaggtgaggtgggtttcctggctgaggaacg
tcggatcaacgtggcggtgacacgtgcccggcgccccgtagccatcatctgcgacagcca
cactgtgggcagccaacccttcctgcggcggctgctggagcacctcacccagcacggcca
ggtgcgctcggccttcgagtacctggatgaccttgtgcctgaaaactactcaggccaggg
gcaaggtgaacgtcagcacagcccaaagcctcgtgtggcatccaaccccaaaccacagcc
agctccaggcaagaagcacaaggctggagcagcaagccagaaacctggagcgcgttcctc
tccgagcaccaccagacctaggagagaggagacaaaggatgttgctgacaggttcagggc
catgctggcagccttcctggcgagcagtgaggtgcagctggatttccccccatccctaag
ttctcacgaccggatggtggttcaccagctggcggaggagcaggggctgcagcacctgag
caccggggagggccgggacaggtacctcagcgttcggaagagagagcccaccgagccctc
actgcccacagctgtcccccacactgagcagcctcttcctcagcctcttcctcagcccct
tgctcagccccttcctcagcctcagcatcccagcagaaacacccctgtccctgcggagct
gggagaaagcagtgagggctcggggaaagtggacctgaaatccctgcacctggagagagt
ccagagggagaaagccaggcgggaagagacattgaggaaggtgcaggagcccagcgctgg
cagcaggaaaaaggacaaaagtgaagccaaaggaaagccagtggtcaagagtgaagcaga
ggaagattttgatgctctgatctctgctgccatcaaagctgacaggacctgtggctttcc
ccactgcaaagccactgtcacaaccctgggacagctctgccaccactgcaaccggtgcta
ctgcctcagccaccacatccctgaggtccatggctgtggggagaaggccaaggctcatgc
tcggcagcggatcagcagggaagggatcctgtatcccgggagtggctccaaggacaaatc
cctggatcctgccaaacgagcccacctccagcggcgcctggacaagaagctcagtgagat
gacaagccagaggaagggcaaaaagaaagacaaggaaaaatga
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