Acanthisitta chloris (rifleman): 103804362
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Entry
103804362 CDS
T08456
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03030
DNA replication
achl03420
Nucleotide excision repair
achl03430
Mismatch repair
achl03440
Homologous recombination
achl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103804362 (RPA1)
03420 Nucleotide excision repair
103804362 (RPA1)
03430 Mismatch repair
103804362 (RPA1)
03440 Homologous recombination
103804362 (RPA1)
03460 Fanconi anemia pathway
103804362 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achl03000
]
103804362 (RPA1)
03032 DNA replication proteins [BR:
achl03032
]
103804362 (RPA1)
03400 DNA repair and recombination proteins [BR:
achl03400
]
103804362 (RPA1)
Transcription factors [BR:
achl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103804362 (RPA1)
DNA replication proteins [BR:
achl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103804362 (RPA1)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103804362 (RPA1)
MMR (mismatch excision repair)
103804362 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103804362 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
CATSPERD-E_C
RTL1-8_LDOC
RADX_3rd
Motif
Other DBs
NCBI-GeneID:
103804362
NCBI-ProteinID:
XP_009075221
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MQGENVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAR
CVCQVNRFIVNSLKDGRRVVILMDVNVLKTADQVGGNIGNPVPYNEGQGQQRSAAPAANP
AAPSKPQQQNGNVSVAGPAAPKYHAPSNQFGKPSAPSTLNTPGGSQAKVVPIASLNPYQS
KWTICARVTQKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNDQADKFFPLIELNKVY
YFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVSISDLENTPKDS
IVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQPV
VAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVKGGPG
AGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQDCNKKVIDQQN
GLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQSAAFLGELKEKNE
QAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATALDVKPVNYREYSKRLIANIRRNAQ
LG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaatgtctccaagcctgtgctgcaagtcatcaatacacgggcaattgcc
acaggaactgggcccccacgataccgagtgctgatgagtgatggggtgaacacactctcc
tcattcatgttggcaactcagctgaactccctggtggaagaggaacgcttgtcggcccga
tgtgtctgccaggttaacagattcattgtcaacagcctgaaagatggaaggagagtggtt
atactgatggatgtaaatgttctgaaaactgctgatcaggttggtgggaatattggcaat
ccagtgccatacaatgaaggacaagggcagcaacgttctgcagctccagcagcaaaccca
gcagcacccagcaaaccacagcaacagaatggcaatgtgtcagtagcaggtcctgctgct
cccaagtaccatgctccctccaaccagtttggcaaaccaagtgctcccagcacactgaac
acaccaggggggtcacaggccaaagtggtgccgatcgccagcctgaacccataccaatcc
aagtggaccatttgtgctcgtgtcacccagaaaggccaaatccgcacgtggagcaactcc
cgtggtgaagggaagctcttttccatagagatggttgatgaaagcggtgagattagagct
actgcattcaacgatcaagcagacaagttctttcccctcattgaattgaacaaggtatat
tattttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgac
tatgagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcatctt
ccatctgttcagtttgattttgtatccatctctgacttggagaacacacccaaagactcg
attgttgatgtaattggaatttgtaagagctatgaagatgtcaccaaaatcacagtgaaa
gctaacaatagggaggtttcgaagaggaacgtgcatctgatggatacatcagggaaactg
gtgacagctacactgtggggaaatgaggctgaacagtttgatggctccagacaacctgtg
gttgccatcaaaggagccagggtctctgattttggtggtagaagcctgtctgtcctgtcc
tcaagtacagttgtcatcaaccctgacagcccagaggcttttaagctccgaggatggttt
gactccgaggggcagcttctggaatgtgcctccatctctgatgtgaagggtgggccagga
gctggagcaaataccaattggaaaactttgtttgaagccaaatctgagaacttgggacaa
ggagataaggcagattattttagctgtgtgggcacaatcgtacatctgcgcaaagagaac
tgtatgtaccaggcatgtccctctcaggattgcaacaagaaagtgatagaccagcagaat
ggactctatcggtgtgagaagtgtgaccgtgaattccccaacttcaagtaccgcatgatg
ctcctggtgaccattgcagactgtctagagtatcagtgggtgacttgtttccaggaatca
gcagaatttattcttgggcaaagtgcagctttcctgggagaactgaaagaaaagaacgag
caggcgtttgaagaagtgttccaaaatgcaaacttcaacacgtatgagttcaggatccga
gtgaaactggagacttacaatgatgaatctcgtattaaggccacagcattggacgtcaaa
cccgtgaactacagagaatacagcaagaggttgattgccaacatcaggagaaatgctcag
ctggggtga
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integrated database retrieval system
