Acanthisitta chloris (rifleman): 103804413
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Entry
103804413 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXIII) chain-like
KO
K24355
collagen type XXIII alpha
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
achl00536
]
103804413
Glycosaminoglycan binding proteins [BR:
achl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103804413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103804413
NCBI-ProteinID:
XP_009075275
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MYSLNGCFYSSSKQKLGEGLAKLRTVREAPSDCMCPPGPPGRRGKPGRRGEPGPAGQSGR
DGYPGPLGLDGKPGPPGPKGEKGEAGDVGPRGDRGRDGVTGPPGPPGPPGARGPPGDTGK
DGPRGPPGSPGFKGEPGEDGIMGARGPPGPKGEPGIQGKKGDDGIPGEPGPVGPKGEKGS
VGPKGENGTDGFPGPKGEPGEKGGIGSIGPRGPPGLKGEQGDTVVIDYDGRILDALKGPP
GPPGPPGPQGTPGPKGELGLPGPPGLDGEKGPKGAKGDQGSTGMTGQKGETGEMGLAGPQ
GAEGSKGEKGDTGSPCLQNNHIIPEPGPPGLPGPMGPPGIQGPKGLDGAKGEKGDSGEKG
DHGDPGPAGLPGAPGLIGLPGTKGEKGKPGEPGLDGFPGLRGEKGERSERGEKGERGIPG
RKGAKGQKGEPGPPGLDQPCPVVSLLFHSSXAHVAGAEKSCSFAAREKEGGFGSSLFCSK
SDQMVIVFSLFLLXFICTAGSSLLALRAPXWPDGSKPQQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtattctctaaatggctgtttttattcctcctccaaacagaaactgggtgaaggacta
gcaaagctgcggacggtgagagaggctccatcagactgcatgtgccccccaggacctcca
gggaggcgagggaagccaggccggcgtggagaacctggacctgcagggcagtcaggacgt
gatggttacccggggcctcttggtttggatggcaaacctggacctccaggaccaaaaggg
gagaagggtgaagcaggggacgtcggcccaaggggtgatcgaggtcgagatggagtcact
ggcccccctggtccaccaggacccccaggtgcccgggggcctcctggtgacacgggaaag
gatggcccaagaggacctccaggctcccctggtttcaaaggcgagccaggagaggatggc
atcatgggtgccagaggacctccaggaccaaagggtgagcctggcatccaagggaaaaag
ggtgatgatggaatccctggagaaccaggacctgtgggccctaagggagaaaaaggaagt
gtgggtcccaagggagagaatggcacagatggattcccaggacccaagggtgaacctggt
gagaagggaggaattggctccattggacctcggggtccccctggcctgaaaggggaacag
ggtgacactgttgtgattgactacgatggcagaatcctggatgcactcaagggtccacca
ggtcccccaggcccaccaggcccccaaggcactccaggtcccaagggagagctgggcttg
ccaggtccacctggactggatggggagaagggtcccaaaggagcaaagggtgaccagggc
agcacaggcatgacggggcagaaaggagagacaggagaaatgggcttagcaggtccacag
ggagcagaagggtccaaaggagaaaaaggagacactgggtcaccgtgtctgcagaataat
catatcatacctgagcctggaccccctggattacctggccctatgggtcctccaggaatc
caggggcctaaaggtctggatggtgcaaagggagagaaaggtgacagtggtgagaaggga
gaccacggtgaccctggacccgctggtctcccaggtgctccagggctcatcggtttacct
ggtaccaaaggagagaagggaaagccaggggagccaggattggatggtttcccaggcctc
agaggagagaaaggagagcgaagtgaaagaggggagaagggtgagcgaggaataccaggg
agaaaaggagccaaagggcagaagggggagccaggccctcctggactggaccagccttgt
cccgtggtaagtcttttatttcactcatcctaagcacacgttgctggggctgaaaagagc
tgcagctttgcagccagggaaaaggagggaggatttgggagttctctattttgcagtaaa
tcagaccagatggttattgttttctcacttttcttactgnngtttatctgcactgctgga
agttcactgctcgctctaagggctcctnactggccagatgggagcaagccacagcagtaa
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