Acanthisitta chloris (rifleman): 103805100
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Entry
103805100 CDS
T08456
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achl03041
]
103805100 (DDX27)
03009 Ribosome biogenesis [BR:
achl03009
]
103805100 (DDX27)
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103805100 (DDX27)
Spliceosome [BR:
achl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103805100 (DDX27)
Ribosome biogenesis [BR:
achl03009
]
Eukaryotic type
Pre-60S particles
Helicases
103805100 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
RGS12_us1
FerA
PRK
Motif
Other DBs
NCBI-GeneID:
103805100
NCBI-ProteinID:
XP_009075982
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
WAAALRQLRGKRAATTLDEKIEKVRQKRKLQEKEAKQAKVRDEDAEDEDNQTKKNESEDF
GGDEEDVESQYSLDDETIFTKADKVKVKERRRSKKGEAEPENFFEDASQYDDNLSFQDMN
LSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLERLIYKP
RQAPITRVLVLVPTRELGIQVHSVTKDLAQFSSITTCLAVGGLDLKTQEAALRSGPDILI
ATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQTMLFSAT
MTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLTRTFQD
HVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLESLRRFKDEQIDILVATDVAA
RGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKDIVKAAKT
PVKARILPQDVILKFREKIENLEKDVYAVLCLEREEREMQQSEAQINRAKKQLETGKKET
TGEGLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFMQDTQKKGQMTPEERSQFE
ILKSQMYAERLAKRNRRAKRARALPEEEPAAVPAGPKKKKKVSVFDEELTNTSRKALKQY
RAGPSFEDRKRLGMTQRRKGGNFKSKSRYKRK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
tgggcggcagcgctgcgccagctccgcggcaagagagcagccacgacgctggatgagaag
attgagaaagtgagacagaaaaggaagctccaggaaaaagaagctaaacaagcaaaagtg
agagatgaagatgcggaggatgaggataatcaaaccaaaaagaatgagagtgaggatttt
ggtggtgatgaagaagatgtggagtctcagtattcattggatgatgaaactatcttcaca
aaagcagataaagttaaagtgaaagaacggaggagatcaaaaaagggagaagcagaacca
gagaactttttcgaagatgcctctcaatatgatgataacttgtcattccaggacatgaat
ctttcacgacctttactaaaggcaatcacagctcttggcttcaagcaaccaaccccaatt
cagaaggcttgtatcccagtgggtctgctggggaaggatatttgtgcctgtgctgccact
gggacaggtaaaacagctgctttcatcttgcctgtcctcgagcgcttgatctacaaacct
cgccaggctccaataacacgtgtgttggtgcttgtgccaacacgagaactgggtattcag
gtgcactctgtcacgaaggacctggctcagttcagcagtatcacaacttgccttgctgta
ggtggcctagatttgaagactcaggaagcagctctgcgctctgggccagacattcttatt
gccactcctgggcggctgattgatcatctccacaactgcccttctttccacctgagcagt
gtcgaggtgctgattttggatgaagcagacaggatgctggatgaatactttgaggagcag
atgaaggaaataatccggttgtgctcccaccatcgtcaaacaatgcttttctctgccaca
atgacagaggaggtgaaagatttggcttctgtttccctgaagaatcctgtccgcattttt
gtgaacagcaacacagatgttgcacctttcctgcggcaggaatttatccggatcagaccc
aaccgagagggagaccgtgaggccattgtgtcagctctgctgacacgaacattccaagat
cacgtgatgcttttcacccagaccaagaagcaagctcaccgtatgcacatcctgcttggg
ctgatgggtctgcgggttggggagcttcatgggaacctctctcaggcacagcggctggaa
tcactcaggcgctttaaggatgagcagattgatatcctggtagctacagatgtggctgca
cgtggacttgatattgaaggtgttaaaacagtgatcaattttaccatgcccaacaccacc
aaacactatgtccatcgtgtgggtcggacagccagagcaggcaaggctggtcgttccgtt
tctcttgtgggtgaggaagaacgcaagatgctgaaggatattgtcaaggctgctaaaacc
ccagtgaaagccagaattctcccccaagatgtcatattaaaatttcgagagaagattgag
aatctggagaaagatgtctatgcagttctgtgcttggagcgtgaggaacgtgagatgcag
cagtcagaggcccagatcaatagggcaaagaagcagctggagacaggaaaaaaggagact
acaggtgagggtttggagcggagctggttccagactcgtgaggagaggaagaaggagaaa
ttggctaaagccttacaggaatttgacctagcattacgagggaaaaagaaaaggaagaaa
tttatgcaggacacacaaaaaaaaggccaaatgactccagaagagaggtcacagtttgaa
atcttgaaatctcaaatgtatgctgagcggctggcaaagaggaatcgccgagcgaagaga
gccagagccttgccagaagaggaaccagcagcagtgccagcaggtcccaagaagaagaaa
aaggtgtctgtgtttgacgaagagcttaccaacacgagcaggaaggctctgaagcagtac
cgtgctggcccatcatttgaagatcgaaaacgcttgggtatgactcaacgtaggaaagga
ggaaacttcaaatccaagtccaggtacaagagaaagtaa
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