Acanthisitta chloris (rifleman): 103805304
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Entry
103805304 CDS
T08456
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103805304 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
achl02000
]
103805304 (ABCA4)
Transporters [BR:
achl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103805304 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
SRP54
R1_ABCA1
AAA_15
Motif
Other DBs
NCBI-GeneID:
103805304
NCBI-ProteinID:
XP_009076194
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
FAYGVPNLTLKDIACSEMLLDRFIIFSSRRGLPSVRKAMCALSQQSLQRVEDALYANVDF
FKLFQLLPTVLDRNSPGADLKAWGRVLSNISQAVQKLVRRPSVQDLMIVLQPFVQDGRPE
SLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSDYLYDNTTTPFC
NGLIQNLESNPLTKIAWSAAKPLLMGKILFTPDSPSVRQIIKNANSTFEELERLRLLTKA
WEEVGPQLWYFFQSSLQMNMIRDSLRHPTVRDFLNRQLGSEGLTAEHIINFLHNGSSRSR
ERGMADFDWRNIFTAADQVLRLLSQYLECLTLDKFEGFIDETQLTRQALRLLEENKFWAG
VVFPDLEPTTRNLPPHVTYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDDLRYIWGGFAY
LQDMIEHGIIETQTSTEVPLGIYLQQMPYPCFVDDVFMITLNRTFPIFMVLAWIYSVSMI
VKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFLMMAVSTFLLTAVIMHGQVLHYSNP
FLFFLFLLTFITATMMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIICFVWQDRMTFKL
KILASLLSQVAFGFGTEYLSRYEEQGLGLQWDNIRTSPLEGDEYSFLFSINMMLFDAFLY
GILSWYLDNVFPGDYGLPQPWYFPVLASYWLGSRNPETETKAATDVNTFFEPEPTGLIPG
VSIQNLVKIFPNSPKPAVDGMNITFYEGQITAFLGHNGAGKTTTMSILTGLFPPTSGTVL
IGGLDIQTHMDSIRHRLGMCPQHNILFNQLTVAEHILFYSQLKGRTRDEAEQELETMLED
MGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYR
SGRTIILSTHHMDEADILGDRVAIISQGKLFCSGSPVFLKSCFGSGFYLTLVRKMRNTRI
GRATSLCSCGSQCSCSCSGCVHRDEEGAPEQELDGDLNELAEVIHHHIPEAKLIESIGQE
LIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFGISDTPLEEVFLKVTAEADPGMQETG
DTQENGSTLGKTPTENKPGEQNLLKANGTSRMPVSRAGDLNEGKGSRQYKGFQLVHQQIK
ALLIKRFHHASRSHKDFLAQVVLPASFVLLSLIITVIIPPFGEYPALTLHPWIYGQQFTF
FSNERPGNEQMASLTHAFLNKPGFGNRCMKNQPLPKNYPCNNTLTAWNTPAVHPDLSSFL
LRQEWSPENPSPSCKCSTQKKLTMLPECPAGAGGLPPPQRVQRSTEILQDLTHRNISDYL
VKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLHVSGDQIVNFLSDLGRMMNVTGGQT
SLAAAKEIPNFLKYMETEDNIKVWFNNKGWHAMVSFLNVANNAILRGNLRTGQAPEEHGI
TAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERVTKAKHLQF
VSGVSPVIYWLTNFLWDIVNYALSAGMVVAIFAGFDKKAYASPTNLPVLVALLLLYGWAV
IPMMYPASFFFSVPSTAYVALSCINLFVGINSSAITFILELFENNPSLLKFNKTLKNMLL
VLPHFCLGRGLIDLAMNQAVTEVYARFGEEHISDPFQWDFVGKNLVAMAVQGVVFFTLNL
FMQHRLFSTRWFAQTAMSPITGEDEDVAEERKRIMNGGNKTDILELQELTKIYAGRRKPA
VDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTDVTSGDAVVAGHSILTDIANVHQSM
GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIQRVAEWGIQKLGLPMYADHLAGTYSGG
NKRKLSTAIALIGCPPLVLL
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
tttgcctatggtgtccctaacttgactctgaaggacattgcttgcagtgagatgctcctg
gatcgctttattatattcagcagccgaagaggtctcccttctgtacgcaaggccatgtgt
gccttgtcccagcaaagtctacagagagtagaagatgccttgtatgcaaatgttgatttc
tttaagctatttcagctgcttcccaccgtgttggacagaaactcaccaggtgctgacctg
aaggcctgggggagggtgctgtctaatatttcccaagcagtacaaaagctagtcaggagg
ccaagtgttcaggaccttatgattgttctgcaaccatttgtacaagatggaaggccagaa
tccttaggccacttggtgagttccctgtcagatcttttctgtggctacccagaaggaggt
ggatccagagtgctttccttcaactggtatgaagataacaactacaaagctttcctgggg
attgactcaacaaggaagaaatctgattatctttatgataacacaaccacacccttttgt
aatggattgatccagaacttggaatcaaaccctttaaccaaaatagcctggagtgctgcg
aagcccctgctgatggggaaaattctctttactcctgattcaccttctgtacggcaaatc
ataaaaaatgcaaactccacttttgaggaacttgaacgcctcagactattgaccaaagct
tgggaagaagtaggacctcagctgtggtacttctttcaaagcagcctgcaaatgaatatg
atccgtgactcgctgaggcatccgacagtgagggacttcttgaaccgccagctgggttct
gaaggcttaactgctgagcacataatcaacttcctccacaatggatcttcaaggagccgg
gagaggggaatggcagactttgactggcggaacatcttcactgctgcagaccaagttctg
cgtttgctcagtcagtatctggagtgcttgaccttggataaatttgaaggttttattgat
gaaacccaactgactcgtcaagcccttcgcctgttggaggaaaacaaattctgggctggt
gtggtatttccagacctagaacccacaaccaggaatcttccaccacatgtgacatacaag
atccggatggacatagatgcagtggaaaaaacaaacaaaatcaaagacaggtactgggat
cctggtccaagagctgatcctgtagatgatttacgttatatctggggaggctttgcatat
ctgcaagacatgattgagcatgggattatagagacccagaccagcactgaagtgccattg
ggaatttatctgcagcaaatgccatatccatgttttgtggatgatgtcttcatgatcacc
ttaaaccgcacctttcccatcttcatggtgctagcttggatatattcagtctccatgatt
gtgaagagtatagtgctggagaaggaaatgcgtctgaaagaggctatgaagaacaggggt
ataactaatggagtgatttggtgcacttggttcctagacagctttctcatgatggctgtg
agcacattcctcctgacagcagtgatcatgcatggacaagtactgcattatagcaatcca
tttctcttctttctgttcctactgacattcatcactgccaccatgatgcagtgtttcttg
ttcagcaccttcttctccaaagcaaatctggcagctgcctgcagtggagtcatctacttc
actttgtacctgccccacatcatctgctttgtctggcaagaccgcatgacttttaagctg
aagatcctagcaagtttgctttctcaagtagcttttggttttggaacagaatacttgtca
cgctatgaagaacaaggcctcggcctacagtgggataacatcagaaccagtcccttggaa
ggagatgaatatagttttcttttttccattaacatgatgctttttgatgcttttctctat
ggaatactttcttggtatcttgacaacgtttttccaggggactatgggttaccacagcct
tggtattttcctgtgctggcttcttactggcttggctctagaaacccagaaactgagaca
aaagcagccactgatgtaaataccttctttgagcctgagccaacaggattgattccagga
gtaagcattcagaacctggtgaagatttttccgaacagccccaagccagcagtagacggg
atgaatattactttttatgagggtcagattacagccttccttggtcacaatggagcagga
aagacaaccaccatgtcgattctgacaggcctcttcccacccacgtctggaactgtgctg
attggtggcctggatattcagacgcacatggactcgattcggcacagattaggcatgtgc
cctcagcacaacatcttattcaatcagcttactgtagcagaacacatcttgttttattct
caactgaaaggaagaaccagggatgaagctgagcaagagctggaaacaatgctagaagac
atgggcctcacccataaaaggaatgaagaagctcagaatttgtcaggtggaatgcaaagg
aaactgtctgttgccattgcttttgtgggtgaagcaaaagtggtagtcttggatgagccc
acttctggagttgatccatattccaggcgatctatctgggatcttctgctgaagtatcgc
tcaggcagaactatcatcctctcaacccaccatatggatgaggcagacatccttggagac
agagtagccatcatatcccaagggaaactcttctgctcaggctctcctgtattcctaaag
agctgctttggctctggcttctatctcactcttgttcggaagatgagaaacaccagaatt
ggaagggctacatcactctgtagctgtggatctcagtgttcctgctcctgctccggctgt
gtgcaccgggatgaagaaggagctccagagcaggagctggatggagatctgaatgagtta
gcagaagtaattcaccatcatatcccagaagcaaaattaattgaaagcattggtcaggaa
ctcatttaccttttgcccaataaaaactttaaacaacggtcttatgccagtctcttcaga
gaactggaagaaacattggatgacctgggactcagcagttttggaatttcagacacacca
cttgaagaggttttcctgaaggtcacagcagaagctgaccctggaatgcaagaaacagga
gacactcaagaaaatggttctactcttggcaaaactcctactgagaacaaaccaggtgaa
caaaatttactgaaggctaatggcacttctcgaatgccagtcagcagagcaggagatcta
aatgaaggcaaagggtcccgacagtataaaggttttcagcttgtgcatcagcagatcaaa
gcactgctcatcaaacgtttccaccatgcctcccgcagccacaaggactttctagcccag
gttgttcttcctgctagttttgtgttgctgtctctaataattacagtcattatccctcca
tttggagaatatcccgccttaacattacacccttggatctatggacaacagttcactttc
ttcagcaatgaacgtcctggcaatgaacagatggcctcccttactcatgctttcctgaat
aaaccgggatttggaaatcgctgcatgaagaatcagcctcttcctaagaactacccatgc
aataatacactaactgcctggaacacacccgctgttcatcctgacctaagcagcttcctg
ctgcgccaagagtggagtcctgagaatccatcaccttcctgcaagtgcagcactcaaaag
aaactcactatgctgccagaatgccctgcaggtgcaggaggcctcccaccaccacagaga
gtgcagcgcagcacagaaattcttcaagatctgacccacagaaatatttcagattatctg
gtgaaaacatatcccactttgataaaaggaagcttgaagagtaaatactgggtcaatgaa
caaagatatggaggaatttctataggaggaaggcttccagtccttcatgtttctggagat
caaattgtcaattttttaagtgatcttggccgaatgatgaatgtgacaggagggcaaact
tcactggctgctgctaaagaaatccccaatttccttaaatacatggaaactgaagataat
attaaggtgtggtttaacaataaaggctggcacgctatggttagtttcctcaatgtagcg
aataatgcaatcctcagaggtaacctacggactggccaagcccctgaggaacatgggatc
actgctgtaaaccatcctctgaacctcaccaaggagcagctctctgaagtcactgtactg
accacttcagtggatgctgttgttgccatctgtgtgatttttgccatgtcatttatacca
gccagttttgttttatacctgattcaagaacgtgtaacaaaagccaaacatctccagttt
gtcagcggtgtgagccctgtgatctattggctaactaacttcttgtgggacatagtgaat
tatgcattgagtgctggaatggttgtggctatattcgctggattcgacaaaaaggcatac
gcttctccaactaatctccctgtgcttgttgccttgctgcttctctatggatgggcagta
attcccatgatgtatcctgcctctttcttcttcagtgtccctagcactgcttatgtggca
ttgtcctgtattaatctctttgtggggatcaacagcagtgccatcacgttcatcctggag
ttatttgaaaataacccttctttgctgaagtttaataaaacattgaaaaatatgctgctt
gtcttaccacatttttgtctgggccgtggactcattgacttggccatgaaccaagctgtg
actgaagtatatgcaaggtttggtgaggagcacatttccgatccctttcagtgggacttt
gttggaaagaacctggtagccatggctgttcaaggggttgtgttcttcactctcaatctc
tttatgcagcaccgtttgttctccacaagatggtttgctcagactgccatgtcacctatt
actggtgaagatgaggatgttgcagaagaaagaaaaagaattatgaatggaggaaacaaa
acagatatcttagaattacaagaactgaccaagatttatgcaggtcggcgcaagcctgca
gtggacagactctgtgttggcatccgtcctggggagtgctttggccttttgggagtgaat
ggtgctggcaaaacaacaacattcaaaatgctgactggagatactgatgtgacatctgga
gatgctgtagtggctggccatagtatattgactgacattgctaatgtccatcaaagcatg
ggatactgccctcagtttgatgccattgatgacctgctcacgggacgagaacatctctac
ttatatgcacgcctgcggggggtgccagcagaggaaatccagagggttgctgaatggggc
atccagaagctgggacttcccatgtatgcagaccacctggctggtacctacagtggtggc
aacaagcgcaagctctccactgccattgcgctgataggctgccccccactcgtcctgcta
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