Acanthisitta chloris (rifleman): 103805457
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Entry
103805457 CDS
T08456
Symbol
SOX13
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
achl03000
]
103805457 (SOX13)
Transcription factors [BR:
achl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103805457 (SOX13)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
103805457
NCBI-ProteinID:
XP_009076360
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All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSMRSPVSPHLELDGAGSMVNCTIKAEEKKEGSYEAPAGAAPSTEPRHNDPPGPPPRDGT
DPQALPQVSPTAGANLCRSPAGDVPEPRRSAFEPAVSSQDKLDFNRNLKEVMPTIEKLLS
SDWKERLLGRNTAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMATML
FEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQAFAPSHQSLPVSPDSQLALP
IQPIPCKPVDYPVQLLHSPPPPTLKRPAGPGHLQLQETSQPLNLTAKPKGSDLPSASSSP
SLKMSSCQSLTPSHGTTRDLQTSPSNLPLGFLGEGDAITKAIHDARQLLHSHSGAMEGAL
SNPYGHXHVGIETSPVKERMEETPAHRLDEALLTCEMDGSRHFPESRNNNHIKRPMNAFM
VWAKDERRKILQAFPDMHNSSISKILGEFWXXXXXXEKQPYYEEQARLSRQHLEKYPDYK
YKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQVPPTSSDVLYPRPVQL
APPLMEHYMEPNMPVIVKTCSLKDGDAADDGHSVPDGDMYRYSEEEDSDGEDKSDGELVV
LTD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctgtttctccccacctggagctggatggagctggcagcatggtg
aactgcaccatcaaggcggaggagaagaaggaaggaagctacgaggccccagcaggggct
gcccccagcactgagcccaggcacaacgaccccccagggccaccacccagggatggcacc
gacccccaggccctgccacaggtgagtcccacagctggggcaaacctttgtcgctctccc
gccggggatgtgcccgagccgcgccgctctgccttcgagcctgctgtcagcagccaggac
aagctggacttcaacaggaacttgaaggaggtgatgccaaccatcgagaagttactgtcc
agtgactggaaggagaggctgctgggccgaaacactgctgagtccaaggaagtgaaaggc
acccaggagagcctggcagagaaggagctgcagctactggtgatgatcaaccagctgtcc
acgctgcgggaccagctgctgacagcccactcggagcagaagaacatggccacgatgctc
ttcgagaagcagcagcagcagatggaactggcacggcagcagcaggagcagattgccaag
cagcagcagcagctcatccagcagcagcacaaaatcaacctcctgcagcaacagatccag
gccttcgcccccagccaccagtctctccctgtcagccctgactcccagttagcgctgccc
atccagcccatcccctgcaaaccagtggattacccagtgcagctgctgcacagtcctcct
cctcccacgctgaagagacccgccggcccgggccacctccagctgcaggagacctcacag
ccgctgaacctgacagccaagcccaaaggttccgacctccccagtgcctccagctcacct
agtttgaagatgagcagctgccagtccctcacaccgagtcatgggaccaccagggacctg
cagaccagcccgtccaacctgcctctggggttcctgggcgaaggtgatgccatcaccaaa
gccatccacgacgcgcggcagctgctgcacagccacagtggagccatggagggggcactg
agcaacccctacggtcactgacacgttgggattgagacttccccggtgaaggagcggatg
gaggagactcctgcacaccggctggatgaggctctgctgacctgtgagatggatggctcc
cggcacttccccgagtccaggaacaacaaccacatcaagcggcccatgaatgccttcatg
gtgtgggcgaaggacgagaggaggaagatcctccaggccttccctgacatgcacaactcc
agcatcagcaagatcctgggtgagttctggnnnnnnnnnnnnnnnnnggagaagcagcca
tactacgaggagcaggcacggctgagccgacagcacctggagaaatacccagactacaag
tacaaaccacggcccaaacgcacctgcatcgtggagggcaagaggctgcgcgtgggcgag
tacaaggcgctgatgaggaaccggcggcaggacgccaggcagggatacttgatagggccc
cagggcagccaggtgccccccacctcgtcggacgtgctgtacccgcggccggtgcagctg
gcaccgcccctgatggagcactacatggagcccaacatgcctgtgatcgtcaagacgtgc
agcctcaaggatggggacgccgcggacgacgggcactcggtgcccgacggggacatgtac
cgctacagcgaggaggaggactcggacggggaggacaagagtgatggtgaactggtggtg
ctgacggactga
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