Acanthisitta chloris (rifleman): 103805948
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Entry
103805948 CDS
T08456
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03440
Homologous recombination
achl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103805948 (BRIP1)
03460 Fanconi anemia pathway
103805948 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achl03400
]
103805948 (BRIP1)
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103805948 (BRIP1)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103805948 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
103805948 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-GeneID:
103805948
NCBI-ProteinID:
XP_009076862
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MSSEGAEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNTRQHCLLESPTGSGKSLALLCSA
LSWQQALHEKFLLTSSCEKEDSKAETSPPCHCTCHSQSKSNEAATSMNHGAAASHSCETG
SSLPKTGSKENETLASKLCAKKKLFQLDRDNDDFQVDRKRIRPLETEQQVRKRHCAAKGV
QFVDALEVYHQRKNGELTVHSEKSANPTAFSPQASSGPCTVCSCSSGKDPEKDPSHTKKK
ENGDKLSVPKIFFGTRTHKQITQISRELKRTAYASVPMTILSSRDYTCIHPKVSNSAGNR
NELCQELLEGKHGKSCAYYHSMHKLSEHFALQAAHGVYQAWDIEDLVSLGRQLRACAYFA
ARELMVGADIVFCPYNYLLDPQIRESMDIHLKGQVVILDEAHNIEDCARESVSYSVTESQ
LRAARDELDYMVTNNIRQKDHEPLRAVCCSLINWLQESSSQLVERGYETSCKVWSGKEML
SFLHNMGITGISFPILQKHLATVLEKEEKMCVHGREEMVEVPVVSPGTQIVLKGLFMVLL
CLFKQHSRFADDYRVALQQTYTWMNENQPDDLDASPFFTRPKHKKSSRHKTLVHMLSFWC
LNPAVAFSDLNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRKSQVWVGTVGVG
PNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKMLDKLKDRWIHTGLW
KKLELVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSEGLDFCDE
NARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQALGRCIR
HRNDWGALILVDDRFQNNPNKYIIGLSKWIRQQVEHHRKFENALESLHAFAVRNQKGSDC
PSEHNSELLHVPPKDLSQGSEHEATIHLSPDVPAKSTEQNLRSEGNFTKTINSVNPAAAN
QPSGQKVSVESHSHQAKQRRKHKNPTTKVPTAKIEREEKNGWTNAESMEGNCCTKPLTST
PLPVAQNCRSTAGSKQEDVDGPSELVDSVNQCQSLTAELNPRGPEPCLETTHFSVQMTEA
SVAEGCPGKPQLQAEPCSEFPSAGEEAELSTINVSAEAEDEDESIYFTPELYDAEPEEEK
AEPPVPTCNGNENWVECGNSTVADELFAINTSEALNVTKKLVEDDGRSTRSHGIVQNERS
KDSAVNPLEMASAVGAEQRAAQEMDTTKQRISLSRSQNKGVSSFLLSSRSTWGQFL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgagggggcagagtataccattgggggggtgaaaatcatcttcccctgcaag
gcttacccctcccagctggctatgatgaatgctattgttaagggcttaaacaccaggcag
cactgcttgctggagagccctacaggaagtggcaagagcttggcattgctttgttctgca
ttgtcttggcagcaagctctgcatgagaaattcctgcttacctcatcctgtgagaaggag
gacagcaaggcagagacctccccaccatgtcactgcacatgtcattcccagtccaagagc
aatgaggctgcaacaagcatgaatcatggtgctgctgcttctcatagctgtgaaacagga
agctcactgccaaaaacagggagtaaggaaaatgaaaccttagcttcaaaattgtgtgcc
aaaaagaagttatttcaacttgacagagacaatgatgatttccaagtagacaggaaaagg
attcgtcccttggaaacagagcagcaggtgaggaaacgccactgtgctgccaaaggagtg
cagtttgtggatgctctggaagtttatcatcagaggaagaatggagagctgactgttcac
tctgaaaaaagtgcaaaccccactgctttttctcctcaggcatcttctggcccttgcact
gtgtgttcttgttcctctggaaaagaccctgagaaagatcccagtcacacaaagaagaaa
gaaaacggggataagctgtctgttcccaaaatattttttggcacacgaacacacaaacaa
atcacccagatcagccgtgagctgaagagaacagcctatgcctctgtgcccatgaccatc
ctctccagcagggattacacctgcattcacccaaaggtgtccaacagtgctggcaacagg
aatgaactgtgccaggaattgctggaaggaaaacatggcaagtcctgtgcttactaccac
agtatgcataaactcagtgagcactttgccctacaggctgcacatggggtgtaccaggcc
tgggacattgaagacctggtgagcctgggcaggcagcttcgtgcctgtgcttacttcgca
gccagagagctcatggtgggagcagacattgtgttctgtccttacaattacctcctcgac
ccacagatacgagagagcatggacattcacctgaaaggccaagtagtcattttggatgag
gcccataacattgaggactgtgctcgggagtcagtgagttacagtgttacagaaagtcag
ctcagagctgctcgagatgagctcgattacatggtcactaacaacatcaggcagaaggat
catgagcccctgcgagctgtgtgctgctccttgataaactggttacaggagagctccagt
cagctggtcgagagagggtatgaaacttcttgtaaggtgtggagtggaaaagaaatgctc
tccttcttacacaacatgggaatcactgggatttctttccccattttgcagaaacacctt
gctactgtcctggaaaaagaagagaagatgtgtgtgcatggccgagaggagatggtggag
gtgccagtggtgagccctggcacacagatcgtgctcaaagggctcttcatggtcctgctg
tgtctcttcaagcagcacagcaggtttgcagatgattacagagttgctctgcaacaaact
tacacttggatgaatgaaaaccaacctgatgatttggatgcaagtcccttcttcacacgg
cccaagcacaaaaagagttccaggcacaaaacccttgtccacatgctcagtttctggtgc
ctgaaccctgctgtggcgttttctgacttaaatgaggttaggacaattgttctgacctcg
ggtactctctctcccatggattcattttcctcagagcttggtgtgaagttttccattcag
ttggaggcaaatcatgttattaggaagtcccaggtctgggttggcactgtcggagtaggc
cccaatgggaggaagttgtgtgccacgttccagcacacagagacctttgagttccaggat
gaggtgggagcacttctgctctcagtgtgccaaacagttggccaaggaattttgtgcttt
ttaccatcctataagatgttggacaaactcaaggatcgctggatacacactggtttgtgg
aagaaactggagctggttaagacagtcattgcagagcctcagggaggggcaaagagtgac
ttcgatgagctgctgaaaatatactatgatgcaataaaatgtaaaggagaaaaagatgga
gctctgctgatagctgtgtgcagaggcaaagtgagtgaagggctggatttctgtgatgag
aacgctcgggcagtggtcaccatagggattccatttccaaatgtgaaggaccttcaggtt
gaattaaagaggaaatacaatgaccagcacaaaagtacaagaggccttttatcagggagt
cagtggtatgaaattcaagcttatagagctctcaaccaagccctgggaaggtgcatcagg
cacaggaatgactggggtgctctcattttagttgacgatcggttccagaacaacccaaac
aaatacataattggattatctaagtggattcgtcagcaagtcgagcaccacagaaagttt
gagaatgcccttgagtccctgcatgcctttgctgtaaggaaccagaaaggcagtgactgt
ccctcagagcacaacagtgaactcctccatgtgcctccaaaagacctgtcacaaggctct
gaacacgaggcaactattcatctgtcaccagatgttcctgctaaaagtacagagcaaaat
ttgcgttcagaaggtaattttactaaaaccatcaactcagttaatcctgcagcagcgaat
cagccaagtggccagaaagttagtgtagagagtcattctcaccaggcaaaacaaagaaga
aaacataagaaccccacaaccaaagtgccaacagctaaaatagagagagaagaaaagaat
ggttggactaatgctgagagtatggaagggaattgctgcactaaaccactgacttcaaca
cctttgcctgtagcccagaactgcaggtccacagctggtagcaaacaagaggatgtggat
gggcctagtgaacttgttgacagtgtaaatcagtgccaatcattaactgcagaactcaac
ccaaggggaccagaaccgtgtttggaaacaactcatttttcagttcaaatgactgaggcc
tcagttgctgaagggtgtcctggtaagccacagcttcaagctgagccctgcagtgagttt
ccctcagcaggagaggaagctgaactttcaacaataaatgtgtctgcagaagctgaagat
gaggatgagagtatctacttcactccagaactctatgatgcagaaccagaggaagagaaa
gctgaaccaccggttccaacctgtaatggaaatgagaattgggttgaatgtggaaactcc
acagttgctgatgagctttttgcaatcaacacttcagaagcactaaatgtgactaaaaaa
ctggttgaggatgatggcaggagcacgaggtcacatggcatagtgcagaatgagaggagt
aaggatagtgcagtgaatcctctagagatggctagtgcagtgggagcagagcagagagca
gctcaggagatggacaccacaaagcagagaatcagtctctccaggtcacagaacaaaggt
gtgtcatcttttctactgagcagtcgtagcacatggggacagtttctatag
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