Acanthisitta chloris (rifleman): 103806336
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Entry
103806336 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like
Organism
achl
Acanthisitta chloris (rifleman)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD3_GTPase
Dynamin_N
MMR_HSR1
GBP
Stress-antifung
CelTOS
Motif
Other DBs
NCBI-GeneID:
103806336
NCBI-ProteinID:
XP_009077270
LinkDB
All DBs
Position
Unknown
AA seq
2407 aa
AA seq
DB search
LLAKAFEDEGLDAGYWLPKLSQVLGVQCREALQHLQCEDYLQLKPDVRHTWEEKVLQNLL
KIRDHKPTSEELQKQHLERTKQREAEAKEALRELREIHTSHRQQKEEATVWXALEIPMED
WTPPENSLVDVPESMEKQLEQQEGSVSRREKIPDTEVLRRASGGLALQGIYKSSRLDDVL
AKREQIIRVAEGFQLAAPQQESFHERKEFSSRAEESTFTKSVEQVGLSVSISAKAGLWGL
KLEVGGGYSSSSQSEDTHQSHSEQNYFCTTQYHYIPLASCYFQRHQLHLSDAALRELQDM
EDLLGITAEEDKPKLLESRCERFFSRFGSHINQGPLHFGGIFCWKASAEGFRAEQREEVK
RQTSRALSGCVGGSRGEKGTVGASSSSSQASVQESHRDSAHTAIQLSVLSTGGPPVTDSL
PRWQTGLEADNATWCVIDRGAQLIPVWDVIQSNHSRDFQSVSQMSSGLRAAYEALTNQRV
GSTFGEELVSAREEARNFMEIVKTWEVTVDDSKLRTLLDFKRDLDGKTKSPKVWINMCLS
DKALQKFLVNTVRRYQELPPENTTFLKALLRNLLDPHIYSVKDFPESSCIMQWIFQAEHR
LPEIPNVSGLEELLVTMRRMMENIQAVTYAPGDSDSDIQEAKREATLTTSLAIYSLLQTL
QERAQRDIELLVLIIATSTGYQVESSTFQHLLGHAEICYMAKAMEAAQKEYVGLKEQDAA
RAEASLLLRGLTVTPESKELSPQQKSERLVFMEDHMKGSWSTEIKNLLHRHSARRDWELL
ERDLHSFITGCLAGTSDDLRVQDILKDMGDTLQTTEPPSQSKSMSDSGKSRANQASANQE
FLHLLKRLGLEHHYPRKMGMGDFLIINKTSLQDSQPSKDKELPLYFLQKLLTVDYRVRYL
TCRDESSQGLESMPETTEQDLEPSDSFESFLDALEEAAPEPASSDSHVHPMDLQMAIFHC
ADDFLRQCMATKLAFCQLALPLLVPNPCTSQIEFPLWALSQIQRSWKEPGKPGMQSGAES
YNNKLIYQAETPIVSFIRIGSSASSSKSQLLNALLSHQKHDTFFHRHCRGSTKDCLLMKG
VVEIAWYCPQGSHDDTLDCCVAFCNLHGDARDHRAQLQFLQEISAVNVALVSDSEQMGSR
GKTILQALWQSQRPLVCLLTDKENVATGPPSKIIKIGIKNRNEAELRDKLSKAIRNLLEG
SNPRFSLATCLAKARQHGFLVDEDQPACVTAKAKAEELVSLLKREKLSKIKSQLLPLQGK
LWQDWCLKDKELTRLQEKGNKSIEHYRSQIECEKATIRRKQLEKAFPLNQLMKSFLAFFQ
AVPADTRKYFLQWMKVFMDELSSGHLEKLRREYHELWSESLAAKNSKGQTSLSPHIQSKL
DALSDEINDSSIGLEHLLREVGQVYEALELTNAEDENVVKLPEIAADLMVLGYPVELMDG
DASYVPLRWVGAIFERLTERLGDKRVFVLSVLGIQSTGKSTLLNAMFGLQFSVSAGRCTR
GAFMQLLKVAEELQQDVGFDYMLVIDTEGLRAIEMANRQSQRHDNELATFVIGMGNMTLI
NVFGENPSEMQDVLQIAVQAFLRMKQVHLSPSCLFVHQNVGEVTARELNLEGQRHLQKRL
DEMAVIAAQQXXXXXXXXXVIHFDVNTHIHYFAHLWEGNPPMAPPNPSYSQNVQQLTSKI
LQAAKKELQGSILGLSGLKVRIGDLWNALRNENFVFSFKNSLEIAAFRKLETAWSQWTWQ
LRSHISELEMRLGNKIRNDDLQEVTREVLEEKVQETSDAIVKDMEKYFTEDKDSEILVQW
KDSRGQKLKELKETLLSETRKKCETLIELRKRHRKLDARKQEYEDKLLRRSRELALSLKG
KSLSEEGLRDNFTSVWTKWVAEVSHDGPPPERVDIDVEIENVLLEHFKEPGVHEQVKSQS
QQRGFVLDTEKHVSRKKYFGIVPRSASEADVRNLQRITDDIIERVRASVRKKEQEKRDYS
RSFIHEILHEVQKGVDSVPTNANCTFNQDYSRDLSVYLCRTAAERFKAMHEAFQKANNAV
AYLNSKRENFLWYFQMSCQGATSITTSAVYLCDKIAPALRQAVCERTAKAIVEDVRGKCH
EFNGSRAALEVCMLRYLAQEENFEHFKNYLNFPADFLQWYIKTRVNSYCLDGTKRLEKFL
ASSLNDLHAKILSAVSSSTQTVKDRKDREDKISLWLDELCRELAEVISLPRSDLKGLEHL
ELTDIEFLSNAMAEPLTALEHNLREGFADADMSCFEREPHTILAEQFLGCSEQCPFCGAL
CTNTMPRHDGDHQLVFHRPEALTGRKWLETPELVLDICSSSVASNTAFCVGSDTWIPYKS
YRTVGPPYSTWNILPDSSMQAYWKWFVCRFQTELEDLYKGKFQGKGEIPEEWRRVTKQEA
LEELDKR
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
ctactggcaaaggcatttgaggacgaaggactggatgctggatattggctccccaaactg
tcacaggtcctgggggtccagtgcagagaagccctgcaacatctgcagtgtgaagactac
cttcagctgaagcctgacgtgcggcacacctgggaggaaaaggtgctccaaaacctcctg
aaaataagagaccacaaaccaacttctgaggagctgcagaagcagcacttggagaggaca
aagcagagagaagcagaggccaaggaagccctcagggagctcagagaaattcacacaagc
cacagacagcagaaagaagaagcgactgtgtggtaagccctggagatccccatggaggac
tggacaccgccagagaactccttggtggatgtgccagagagcatggagaagcaactggag
cagcaggaggggtcagtgagcaggagagagaagatccctgacacagaggtgctgaggaga
gcttcggggggactggccctgcagggcatctacaaatccagcaggcttgatgatgtgctg
gcaaagcgagagcagatcatcagggttgctgagggattccagctcgctgctccacagcaa
gaatcgttccatgagaggaaggagttctcctcccgtgcagaagaatccactttcaccaag
tccgtggagcaggtggggctcagtgtcagtatttctgccaaggccgggctctgggggttg
aaactggaagttggtggaggttacagcagctcctcacagtcagaggacacccaccagtcc
cactctgagcagaactacttttgcaccacccaataccattacatccctctggcttcctgc
tacttccaaaggcatcagcttcacctctcggacgcagcactgcgggagctgcaggacatg
gaggaccttttgggcatcactgcggaagaagacaagcccaagctgctggagagcaggtgt
gagaggttcttcagcaggtttgggtcccacataaaccagggtcccctccacttcgggggg
atattctgctggaaggcgtctgcagaaggattcagagctgagcagcgggaggaggtgaag
cgccaaacgtctcgagcgctgagcggctgtgtcgggggcagccgcggtgaaaaagggacc
gtgggtgcttcctcatccagctcccaggcctctgtccaggagagtcacagagacagtgcc
cacacagcgatccagctctccgtgctcagcaccgggggcccgcccgtgacagattccctt
cctcgatggcaaacggggctcgaggccgataacgcaacctggtgcgtcatcgaccgcggc
gctcagctgatccccgtctgggatgtcatccagagcaatcacagcagggattttcagtct
gtctctcagatgagcagtggtctcagggctgcgtacgaagccctgacgaaccagcgtgtg
ggcagcacttttggagaggaactggtcagtgcaagggaagaggccagaaatttcatggag
attgtgaagacctgggaggtgacggtggatgacagcaaactgcgcacgctgctggatttc
aaacgggatctggatggcaaaactaagagccccaaggtgtggatcaacatgtgcctgtcg
gacaaagccctgcagaaatttctggtgaacactgtgcggaggtaccaggagttgccccca
gaaaacaccacctttctcaaggctctgttgaggaacctcctggatcctcatatctactct
gtcaaggacttccctgagtcttcctgcattatgcaatggatcttccaggctgagcacagg
cttcctgaaattcccaatgtctctgggcttgaagagctccttgtgacaatgcggagaatg
atggagaacatccaggctgtcacctatgcaccaggagactctgactctgacattcaggaa
gcaaagagggaagccaccctgaccacaagcctggctatttattccttgctccagactctc
caggaaagggcacagagggacatagagctgttggtgctcatcattgcgaccagcacaggg
taccaggtggaaagcagcacttttcagcacctccttggacatgcagaaatttgctacatg
gcaaaggcaatggaagcagcacagaaggagtatgtgggtctgaaggagcaagatgctgcc
agagctgaggcctcccttctgctgaggggtctgactgtgacccccgaaagcaaagagctg
tccccacagcagaagagtgagcgtttagttttcatggaagatcacatgaaaggctcgtgg
tccacagagataaagaacctcctgcacaggcacagtgcacgcagagactgggagctgctg
gaacgtgacttgcattccttcatcactgggtgcttggctggcacatcagatgatctgagg
gtgcaggatatactcaaagacatgggagacactttacaaacaactgagcctcccagtcag
tccaagtccatgtcagatagcggcaaatccagagcaaatcaagccagtgcaaaccaagag
ttcctccacttactcaagcgccttggactagaacatcactatccaaggaaaatggggatg
ggagacttcctcatcatcaacaagacctccctgcaggacagccagcccagcaaggacaag
gaactgccactttacttcttgcagaagctattaaccgtggactatagggtcaggtacctg
acttgcagggatgagagcagccagggacttgagtccatgccagaaaccacagagcaagac
ctagaaccctcagactccttcgaaagctttcttgatgctttggaggaagcagcccctgag
cctgcaagcagtgacagtcatgtgcaccccatggacctccagatggcaatttttcattgt
gctgatgacttcctgagacagtgcatggcaacaaagcttgctttctgccagctggcgctg
cctctgctggtgccaaacccctgcacttcacagatcgagttcccgctctgggccctcagc
caaatccagaggagctggaaagagcctgggaagccaggaatgcagagtggggctgagagt
tacaacaacaaactcatttatcaggcagagacacccatcgtgtccttcatccgcattggc
agttctgcctcctcttccaagtctcagctcctgaatgctctgctgagccaccagaaacat
gacactttcttccaccgacactgcagaggcagcaccaaagactgtttgctgatgaagggt
gttgtggagatcgcctggtactgtccccagggaagccacgatgacaccttggactgttgt
gtggctttctgtaacctgcacggagacgcaagggatcacagagctcagctgcagttttta
caggagatatctgctgtgaacgtggctctggtatcggactctgagcagatgggcagcaga
gggaaaacaattttgcaggccctgtggcagtcacaaaggcctttggtttgtcttctcact
gacaaagagaacgttgccactggccctcccagcaaaatcatcaaaatcgggatcaagaac
agaaacgaagcagaactgagggacaagctgtccaaagcaatcaggaatctcctggaaggg
tctaacccacgtttcagcctggccacctgcctggccaaggctcgccagcacgggttctta
gtggatgaagatcagccggcgtgtgtgacggccaaagcaaaggcagaggagctggtgagc
cttctgaagagagagaagctgtccaagatcaaatcccagctgctgcctctccaaggaaag
ctgtggcaggactggtgcctaaaggacaaggagctcactcgcttgcaggagaaggggaac
aagagcatcgagcactaccggagccaaattgaatgcgagaaggcaacaataagaaggaag
caactagagaaagctttccccctcaatcagctgatgaaatccttccttgcctttttccag
gcagtgccagcagataccaggaaatactttctacagtggatgaaggtcttcatggatgag
ctgtcctcgggtcaccttgaaaaactgaggagagagtatcacgagttatggtctgaaagc
ctggcagcaaagaacagcaagggacaaaccagcctgagtcctcatattcagagtaagtta
gatgctctctcggatgaaatcaatgattcatccatcggcctggagcatcttttgagagag
gtggggcaggtctatgaagctctggaattaacaaacgccgaggatgagaacgtcgtcaaa
ctccctgaaattgcagcagatctgatggttttggggtatcctgtggagctgatggatggg
gatgcttcttacgtgccactgcggtgggtgggagcaatctttgagcgcctgacggagcgg
ctgggggacaagcgcgtgtttgtcctctccgtgctcggcatccagagcacggggaagtca
accctgctgaatgccatgtttgggctgcagttcagcgtcagcgcgggcagatgcacccgg
ggagccttcatgcagctcctgaaggtggccgaggagctgcagcaggacgtgggctttgat
tacatgctggtgattgacacggaggggcttcgcgccatagagatggccaacagacagtcc
cagagacacgacaacgagctggccacctttgtcatcggcatgggcaacatgactctgatc
aacgtcttcggggaaaacccgtcagaaatgcaggacgtccttcagatcgccgtgcaggct
tttctgaggatgaagcaagtgcatctttccccaagctgcctctttgtccaccaaaatgtg
ggagaagtaaccgccagggaactgaacctggaaggacagaggcatctgcagaagcggctg
gacgaaatggccgtgatagctgcccagcaggnnnnnnnnnnnnnnnnnnnnnnnnnngtc
atccacttcgatgtgaacacccacatccactactttgctcacctgtgggaaggaaacccc
ccaatggcaccacccaaccccagctacagccagaacgtccagcaattaacgagcaaaatc
ctccaggctgccaagaaggagctgcagggcagcattttggggctctcgggcttgaaagtt
cgtatcggtgacctctggaatgctttacggaatgagaactttgttttcagcttcaagaac
tcattggagattgctgccttcaggaaactggaaactgcctggagtcagtggacctggcag
ctgaggagtcacatctcagagttagagatgaggctgggcaacaaaattcggaacgacgac
ttgcaggaagtcaccagagaagtacttgaagaaaaggtgcaagagacaagcgatgccata
gtgaaagacatggaaaagtatttcactgaagacaaagactctgagatcctggtgcagtgg
aaggacagcagaggacagaagctgaaagagctaaaagagactcttctttctgaaactagg
aagaaatgtgagactcttattgagctaaggaagaggcataggaaactggatgcaaggaag
caggaatatgaagacaagctcctgagaaggagtagggagttggctctgtctctgaaaggc
aagagcctcagtgaagaaggtctgagagacaactttacttctgtctggaccaagtgggtt
gctgaagtctcccacgatggtcctcctccagaacgggtcgatatcgatgtggaaatagag
aatgtccttctagagcacttcaaggagcctggtgtccatgaacaggtcaagtcacagagc
caacagagaggatttgtgttggacacagagaaacatgtcagtaggaaaaaatactttggc
attgtgcctcggagtgctagtgaagctgatgtgaggaacttgcagcgcatcacagacgac
atcattgagcgtgtgagggcaagtgttagaaagaaggaacaggagaaaagggattacagt
cgaagttttattcatgaaatactccatgaagtgcagaaaggtgtggactctgtccctacc
aatgcaaattgcacttttaaccaagattacagcagagatttatcggtgtacctgtgcaga
acagcagcagaaaggttcaaagccatgcacgaagccttccaaaaggccaataacgcagtg
gcctacctgaacagcaagagggaaaatttcctttggtatttccagatgtcctgccaagga
gccacttctatcacaacttctgcagtttacctttgtgacaagattgccccagctctgagg
caggcagtctgtgagaggacagccaaggccatcgtggaagacgtgcgggggaaatgccac
gagttcaatggcagcagagctgctctggaagtttgcatgctgaggtacctggcacaagaa
gaaaactttgagcacttcaagaattaccttaatttcccagcagactttttgcagtggtac
attaagactcgtgttaacagttactgtttagatggtaccaagaggttggagaagttttta
gcttcctcccttaatgatctccatgcaaagatcctgtctgctgtttcttcatcaacccaa
actgtcaaagacaggaaagacagagaggacaaaatctctctttggctggacgaactttgc
agggaactggcagaggtgatcagcttgccccgaagtgacctgaagggccttgagcacctg
gagctcacagacatcgagttcctgagcaatgccatggcagagccactgactgccctggag
cacaacctcagggaagggtttgctgatgctgatatgagctgctttgaaagggagcctcac
accatcctggcagagcagttcttggggtgcagtgagcagtgtcccttttgtggggctctc
tgcacgaacaccatgccgagacacgacggagaccatcagctcgtcttccatcggccagag
gctttgacgggacggaagtggctcgaaacccctgagctggtccttgatatctgttctagc
agtgtcgcaagtaacactgcattctgtgttggtagtgacacgtggatcccctacaagagt
taccggactgtaggacctccttattccacttggaacatccttcctgattcatccatgcaa
gcctactggaaatggtttgtgtgtcgtttccagacagagctagaggatttgtacaaaggg
aaatttcagggcaaaggagaaatccctgaggagtggcgaagagttaccaagcaggaagca
ctggaggagctggacaagcgttag
DBGET
integrated database retrieval system
