Acanthisitta chloris (rifleman): 103806723
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Entry
103806723 CDS
T08456
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103806723 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
achl01009
]
103806723 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
achl04515
]
103806723 (PCDH1)
Protein phosphatases and associated proteins [BR:
achl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103806723 (PCDH1)
Cell adhesion molecules [BR:
achl04515
]
Cadherins
Protocadherins
103806723 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
K319L-like_PKD
Cadherin_4
TMEM154
Mid2
Syndecan
MLANA
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
103806723
NCBI-ProteinID:
XP_009077678
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MVRRLLRLDRTTGLITVQGPIDREDVGTLKFSVMAKDKGANPKTARTQVVVTIKDMNDNA
PSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQ
ASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAP
VFSQSFTEVAFPENNEPDDLVMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEI
RVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMEN
MPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFR
LKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDI
DSGVNAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHG
TALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAV
TLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKGKVKKSKSPKPPKPT
EDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSP
SASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQVGELILRPAAAP
PLHRGAIWTEVWE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgccggctgctgcgcctggaccgcaccacggggctcatcaccgtgcaggggccc
attgaccgcgaggacgtcggcaccctcaagttctccgtcatggccaaggataagggggcc
aaccccaagactgcccgtacccaggtggtggtcaccatcaaggacatgaatgacaacgca
ccctccatagagatccgtggcatagggctggtcactcaccaggatggaatggccaacata
tcggaggatgtgccagtagagacagcagtagctctggtgcaggtgtctgaccgagatgag
ggtgaaaacgctgtggtgacctgcgtggtggctggtgatgtgcccttccagctgcggcag
gctagtgagacagggagtgacagcaagaagaaatacttcctccagaccaccacaccactg
gactacgagtcagtgaaggagtatactattgagattgtggcggtggactcggggaaccca
cccctctccagcaccaactctttgaaggtgcaggtggtagatgtgaatgacaatgctcct
gtcttcagccagagcttcactgaggtggctttccccgagaacaatgaacctgatgacctg
gtgatggaagtaagtgccacagatgctgacagtggttccaatgctaagctagtgtattcc
ctggtgacagacccctcctccaagggctctttcaccatcgaccccgactctggggagatc
cgggtgaaggcagtgctggaccgagagcagcgggaacgctatgagttcttggtggtggca
gcagataagggcagccccagcctgaagggcacagcgtctgtggccatcaatgtcatggac
aggaatgacaacgaccccaagttcatgctgagtggctacaacttctcggtgatggagaac
atgccacccctcagccctgtgggcatggtgacggtgatcgatgctgacaaaggagaaaac
gcccgtatccagttgtcggtggagcaagacaatggggattttgtcatccaaaatggcact
ggcaccatcctctccagcatctcttttgaccgggagcagcagagcacatacaccttccga
ctcaaggcggtggatggtggtgatcctcccagatctgcgtatgtaggggtgaccatcaat
gtcttggatgagaatgataacgctcccttcatcacttccccctccaatgccacctacaaa
cacatcctgccccacacgagccctggccagcaggtcagcaaggtcaaggcggaggacatt
gactctggtgtcaatgctgagctgatctacagcatcacaggaggcaatccctttgagctc
ttccagatatccccgcagagcggagacatcaccctggagaaggagatcctgcgcaagcac
catggcctgcaccgcttggtagtgcgtgtcaacgacaagggcaaaccgtcgcggcacggc
acagccttggtgcacttctacgtcaacgagacgttggccaaccgcacactgctggacacg
ctggtggggcacagcctggacacccccctggacatagacattgccggggaccctgagtat
gaacgcagcaagcagcgaagcaacatcctctttggagtcatcgccggcatcgtggccgtc
accctggtcatcgtgctggttgtcctggtgcgctactgccggcagcgggaggccaagagc
ggctaccaggcaggcaagaaggagaccaaggacctgtatgcacccaagcaggccagcaag
agtgggaagagcaagggcaaggtgaagaagagcaaatctccaaagccacccaagcccaca
gaggatgaggaggagactgggctgcagaaatcactcaagttcaacctcatgaatgactct
gtcagcgacagcccccgaatccacctgcccctcaactaccctccgggcagcccagacctg
gggcgccactaccgctccaactcaccgctgccctccatccagctgcagcctcagtcaccc
tctgcctccaagaagcaccaagtggtgcaggacctgccagccaccaacacctttgttggc
accggggacaacaactcgacgggctccgagcagtactcggactacagctaccgcaccaat
ccccagaaatacaccaacaagcaggtaggagagctcatcctgaggccggcagcggcgccc
ccgctgcaccggggagccatctggacagaggtgtgggagtga
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integrated database retrieval system
