Acanthisitta chloris (rifleman): 103807341
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Entry
103807341 CDS
T08456
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103807341 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
achl03041
]
103807341 (PRPF40A)
Spliceosome [BR:
achl03041
]
Complex A
U1 snRNP components
U1 related factors
103807341 (PRPF40A)
Complex B
103807341 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103807341
NCBI-ProteinID:
XP_009078320
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVCAAQQTATTTSSGTEEHSKQKST
WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTK
ESRWAKPKELEDLEAMIKAEENSTKPEDAAAATSAPAAAADATSTSSTATAAETTGTATA
AAAGAAPEGEGAPAAAGGDTEGAAAASAEEQGQGSSAPGAQEGSADTAGATEDSAKQEGS
ADAASKKEEEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYS
ALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQM
FGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTT
WSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRK
NRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALDLFKFYVEDLK
ARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAE
AREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEAAFEDITLESER
KRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQRSE
SRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDLERDKDKKDRERDSEKDRAR
QRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccccactaccccccgatggggatgcaccccatggggcagaga
ccacccaacatgcccccagttccccatggcatgatgccccagatgatgccccccatggga
ggacccccaatggggcagatgcctgggatgatgcagtccgtgatgcctggaatgatgatg
tctcacatgtcccaggctgccatgcagcccacagtccctccaggagtgaacagcatggat
gcacaagtaggtgtgacacctcctggaactcagacgacacaccccgtggtctgtgcagcc
cagcaaactgccaccaccaccagctctggcaccgaggagcactccaagcagaaatccacg
tggacagagcacaaatcccctgatgggagaacatattactacaacaccgagacgaaacaa
tccacgtgggagaagccagatgacctcaaaacacctgctgagcaactgctgtccaagtgt
ccctggaaagagtataaatcagactccgggaagccttactattacaattcccaaaccaag
gaatctcgctgggcaaagcccaaagagctggaggatctggaagcaatgattaaagctgaa
gagaacagcacaaagcctgaagatgcagctgcagccacatctgctccagctgctgcagcg
gatgccaccagcacctccagcacggccacagcagcagaaaccactggcactgccacagct
gctgctgcaggagcagctcccgagggggaaggtgccccagctgctgctgggggggacact
gagggtgctgcagcagcctcagctgaggagcagggacagggcagctctgcccctggggcc
caggagggcagtgccgacactgccggcgccaccgaggactctgccaagcaggagggctca
gcagatgctgcctcaaagaaggaggaggaggatgcccaaccagtgaagaaaacctacacc
tggaacacgaaggaagaggcaaaacaagccttcaaagagctgttaaaggaaaagcgagtt
ccatccaatgcttcctgggagcaggcaatgaagatgatcattaacgatcccagatacagt
gctttggcaaaactgagtgagaaaaaacaagccttcaacgcctacaaagttcagacagag
aaggaagagaaggaagaggcaagatccaagtacaaggaagctaaggaatccttccagcgc
ttcctggagaaccatgagaagatgacatccaccaccagatacaagaaagctgaacagatg
tttggggagatggaggtgtggaatgccatctcggagcgtgaccggctggagatctatgag
gatgtcttgttcttcctgtccaagaaggagaaggaacaagccaagcagttaaggaagagg
aattgggaagctctgaagaacatactggataacatggccaatgtcacctactgcaccaca
tggtcagaggctcagcagtacctgatggacaatccaacctttgcagaggacgaggagctg
cagaacatggataaggaggatgcactgatctgctttgaggaacacatcagggccttggag
aaggaggaagaggaagaaaagcagaagagtttgctgagggagaggaggagacagcggaag
aacagagaatcctttcagctcttcctagatgaactgcacgagcatggacagctacactcc
atgtcctcctggatggagctgtacccagccataagctctgacatcaggttcaccagcatg
cttggccagcctggctcaacagcactcgacctcttcaagttctatgtggaagacctcaaa
gctcgttaccatgatgagaagaagatcatcaaagacatcttgaaggataaaggatttgtg
gtggaagtgaacacttcctttgaagattttgtcacagtcatcagctccaccaaaagagcc
acaactttagatgcaggaaacatcaaactggccttcaacagtctgctggagaaggccgag
gctcgggagagggagagggagaaggaggaggctcggaagatgaagaggaaggaatcagcc
ttcaagagcatgttgaagcaggcgactccccccatcgagctggacgcggtctgggaggat
atcagggacaggtttgtgaaggaagcagcgtttgaggacatcactctggagtccgagagg
aaaaggatatttaaagacttcttacatgtcctagagcacgagtgtcaacatcaccactcg
aagaccaagaagcactcgaagaagtccaagaagcaccaccggaagcgctcgcggtcgcgc
tcgggctctgagtctgaggatgacgacagccactcgaagaagaagcgtcaacgctccgag
tccagatcggtgtctgaacgttcctccagcgcagagtctgagaggagttacaagaagtca
aaaaaacacaagaagaagagcaagaagagaagacacaagtctgattcaccggaatcagat
ctggaacgagacaaagacaagaaagacagagagagagacagtgagaaggacagagccaga
cagagatccgagtccaagcataaatctccgactaagaaacggcctggaaaggattctggc
aactgggacacctctggcagtgagctgagcgagggagagctggaaaagcagaggaggact
ctgttggaacaactggatgaagatcaatga
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