Acanthisitta chloris (rifleman): 103807509
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Entry
103807509 CDS
T08456
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103807509 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achl03021
]
103807509 (POLR1A)
Enzymes [BR:
achl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103807509 (POLR1A)
Transcription machinery [BR:
achl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103807509 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
103807509
NCBI-ProteinID:
XP_009078489
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
KLSVKAITNSQYLDNVGNPAVNGLYDLALGPPDSKEACSTCMQNFSNCPGHFGHIELPLT
VYNPLFFDKLYLLLRGSCLNCHMLTCPRAVVHLLLSQLKVLEKGLLHAVHDLEVILNKFL
EQCADATGSEIEEELNNHVREILQSSQIGDRCSNVKNVCECRNKLIAEFWKAHTSSKKCP
NCKARRSLVRKEHNSKLTVTYPSTVLHKSGEEGILDEPGGIDESQLGKRGYLTPMTAKEY
VLALWNNEGFFLRSLFPGMDHDESSGFSPDMFFLDLLVVPPSRYRPVNRVGDRLFTNGQT
VNLQAVMKDAQIIRKLLVFMAKEQCQPIKIAEENQTVRVTGEDNEPLDRSVLAIIPGQSI
ADKLYNAWIRLQSHVNIVFDSDMDKLTTEKYPGIRQLLEKKEGLFRKHMMGKRVDFAARS
VICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGASMVINEDGS
RTVLSATSLTQREAIAKQLLTPSSGAPQSGLKIVCRHIKNGDVLLLNRQPTLHRPSIQAH
RARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLAFTDQQYLVPKDG
KPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRGLTDKKGRIKIFPPAIMKPQRLWTG
KQVVSTLLINIIPDNHVPLNLTGKAKIGGRAWVKGPANRCLNLDSMCESQVVIRNGELLC
GVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLGRLFTAYLQLYRGFTLGIEDILVKP
EADHKRKKIIERSRQSGIEAVRAALNLPETASCEEVQGKWQDAHLCKDQRDFNMVDMKFK
EKVNNFNNEINKVCMPLGLHRRFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGRRP
PLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPSEFFFHCMAGREGLVDTAVKTSRSG
YLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFIAENYEV
IQKINRLDEALARMESHQAKQQFKAIKKWQARHQNCVQREGGFLLFSQKKLAGVKAQIPG
GDIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKCPDPSLGVWRPDSHFASVSETFENG
VKAYVNKWQSENSQSYMHPALSSDRLKDLLYLKWQRSLCDPGEAVGLLAAQSIGEPSTQM
TLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVFNTKKALKKVKQLKKQLT
RVCLAEVLQKVDIEESLHMKYKQNNHRLYKIKFHFLPQEYYQEEKCVKPRQILHFMEKRF
FKILLEAIKRKSAKMASFSEVSTRKTTRKDLDDDQSKNNQETAAEEEENIVDAEADEGDG
DATEAKRKKNQEEEVDYESEEENGEENADENLEDEEAESEKEERTPGAEEDQNGADGGES
QHVSFVSQTKKGKDRLLQSAEVRVNAVLDSHPSIQDYIFDTENELWCEVSLALPLAEVYF
DLSSLLASLARSTVIHEVKGITRCLLNENTNKQGEKELILQTEGINLAELFRYSDVLDLN
RLYCNDIHAMAKNYGVESAVRVIIKEIKDVFAVYGIAVDPRHLSLVADYMCFEGFYKPLN
RFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQP
LT
NT seq
5050 nt
NT seq
+upstream
nt +downstream
nt
gaaactgagtgtaaaggccataacaaactctcagtacctggataacgtggggaatccggc
agtgaatggactgtacgacttggctttgggacctccagactccaaagaagcatgttcaac
ttgcatgcagaacttcagcaactgccctggtcattttgggcatatagagctgcccctgac
tgtctacaaccctctcttcttcgataaattatacctcctacttcgaggttcttgtttaaa
ttgtcacatgctgacatgtcctcgagctgtggttcacttgctgctaagtcagctgaaggt
tctggagaaaggtttgcttcatgctgtccatgaccttgaagtcattctgaacaagttttt
agagcaatgtgcagatgcaacaggttcagaaattgaagaggagttaaataaccacgttcg
ggaaatactgcaaagctctcaaataggagatcggtgttcaaatgtcaaaaacgtgtgtga
gtgtagaaacaagctgatagcagagttctggaaagcacatacaagttcaaagaaatgccc
aaactgcaaagccaggaggtcactagtgcgaaaggagcataacagcaagctgacagttac
ctatccttctacagtgttacataagtcaggagaggaaggcattctggatgagccaggagg
tattgatgaaagccagttagggaagagaggatacctgacaccaatgactgccaaggaata
cgtcctggctctgtggaacaatgaaggtttctttttgcgttctctcttccctggaatgga
tcatgatgagagttcaggattcagtccagacatgttttttttagatctgcttgtggttcc
accttcaaggtatcgtcccgtaaatcgtgttggagatcggctgttcactaatggtcagac
tgtgaacttgcaggctgtgatgaaagatgcccaaataataaggaaactcttggttttcat
ggcaaaagaacaatgtcagccaataaaaattgccgaagaaaaccaaacagtaagagtgac
aggagaggataatgagcctctggaccgttctgtgctggcaataattccaggacagagcat
tgcagataagctgtacaatgcttggatacgtcttcagagccatgtcaacattgtgtttga
tagtgacatggacaaactgacaacagaaaaataccctggtatccgtcagctgctggagaa
gaaggaagggctgttccgcaagcacatgatgggaaaacgtgtggattttgctgcccgatc
agtcatttgccctgacatgtacattggcaccaatgagattggcattcctatggtatttgc
taccaaactgacttatcctcagccagtcactccctggaatgtcaaagagctgaggcaggc
tgtcataaatggcccaaaggtccaccctggggcctccatggtcattaatgaagacgggtc
tcgcacggtgttgagtgcaaccagcctgacccagagggaggccatcgctaagcagctcct
cactccttcttcaggcgctccccagtcaggactgaagattgtgtgtcgacatattaaaaa
cggagatgtccttttactgaaccgccagcccactctgcacagaccttccatccaggctca
ccgtgcccgaatcctgcccggagaaaaagtgctgaggctgcactatgccaactgcaaagc
ttacaatgctgattttgatggtgatgaaatgaatgcccatttcccacagagtgagctggg
tagagcagaagcctacaccttagcctttactgatcaacagtatcttgtgccaaaggatgg
gaagccacttcctggcttgatccaggatcacatgatttctggagtcagcatgacaatccg
gggctgctttttcaccagagagcaatacatggagcttgtttaccgaggcctgacagacaa
aaaaggaagaattaaaatctttcctcctgccattatgaaaccacagcgattatggacggg
aaagcaggttgtttctacattgttaataaacatcattccagacaaccatgttccactgaa
tttgactgggaaagctaagattggtgggagagcctgggtaaagggacctgcaaacagatg
tctaaatcttgattcaatgtgtgaatctcaggttgttattagaaatggggaattactgtg
tggagtcttggacaaagctcactttggcagctctgcctatggcctggtccattgctgtta
tgaaatctatgggggtgaaaccagtgggaaagtgctgacatgcctgggacgcctctttac
tgcttacttgcagctgtacaggggatttacactggggattgaagatattttggttaaacc
tgaagcagaccacaaaagaaaaaaaatcattgaaaggtcaaggcagagtggtattgaagc
tgttagagctgctcttaatttgccagaaacagcatcctgtgaggaggtccaagggaaatg
gcaggatgcccatctctgcaaagaccagagggattttaacatggttgatatgaaattcaa
ggagaaagtaaacaatttcaacaatgaaattaacaaggtttgtatgccccttggtctcca
caggagatttccagaaaacaatttgcagttgatggtacagtcgggagccaaaggatccac
tgtaaatacaatgcagatttcttgtttgctgggccagattgaattggaaggtcgaagacc
cccactgatggcatctggcaagtcactgccatgtttccagccttatgatttttcccctag
ctcaggaggatttgtgactggcagatttctcactgggatcagaccttctgaattcttctt
tcactgcatggctggcagggaaggtctcgtggatacagctgtcaaaaccagccgttctgg
gtacctgcaaaggtgtatcataaaacatttggaaggactagtagttcaatatgacctgac
tgtacgagacagtgatggcagtgtggtgcagtttctctatggagaagatggacttgatat
ccctaaaactcagttcttgcaacctgagcagtttccgttcattgcagaaaactatgaggt
aatccagaagataaaccgtctggatgaagctttagcgaggatggagtctcaccaagctaa
acagcagttcaaagccatcaaaaagtggcaagccaggcaccaaaactgtgtgcaaagaga
aggaggttttctgttgttctcccaaaagaaactggcaggcgtgaaagcacagattccagg
gggtgacataaaaaatggaagagaccctgctactttacagttattgaagatgtggtatga
gctagatgagaagaaacgaagaaagtatctgaagaagacaaataagtgtcctgacccaag
cctgggagtttggcgtccagatagtcattttgcatctgtttcagaaacatttgaaaatgg
agttaaagcttatgtcaacaaatggcaatctgagaacagccaaagctatatgcacccagc
actttcttctgatagattaaaggatttgttgtatttaaagtggcagcgatccctttgtga
cccaggagaagctgtgggtcttcttgcagctcagagtattggggaaccttccacacagat
gactctgaacaccttccactttgctggcagaggtgaaatgaatgtcacattgggtattcc
aaggctgcgggaaatcctgatggtggccagtgcaaatattaaaacaccaatgatgagtgt
tcctgtgttcaataccaagaaagctcttaagaaggtgaaacagcttaagaaacagctcac
aagagtgtgcttagctgaggtcttgcagaaggtggacatagaggaatccctgcatatgaa
gtacaagcagaacaaccatcgcctctacaaaatcaaattccatttcttgcctcaggaata
ttaccaagaggagaagtgtgtgaagcccaggcagatcttgcacttcatggaaaaaaggtt
ctttaaaattcttctggaagcaattaaaaggaagagtgcaaagatggcatctttttctga
agtcagcactcggaagacaactcggaaggatttagatgatgaccaaagcaagaataatca
ggaaactgcagcagaggaagaagagaacatcgttgatgcagaagctgatgaaggggatgg
cgatgctacagaagcaaaacggaagaagaaccaggaagaagaggttgattatgagagtga
agaagagaatggggaagaaaacgctgatgagaatctagaagatgaagaggctgaatcaga
aaaagaagaaaggactcctggtgctgaagaagatcagaatggagcagatggtggtgaatc
tcaacatgtttcctttgtgtctcagactaaaaaagggaaagatcgattacttcagtcagc
agaagtgcgtgtaaatgctgttctggacagtcacccatccatacaggattacatatttga
caccgaaaatgaactttggtgtgaggtttcgttggcgctgccgctggcggaggtatactt
tgatctctcctccttgcttgcctcactcgcacggagcacagtgatccatgaggtgaaggg
gatcacacggtgcttgttgaatgaaaacaccaataagcaaggagagaaggaattaattct
gcagactgaagggataaacctggcggagctgttcagatactctgacgttttggacctgaa
cagactttattgcaacgatattcatgccatggctaagaattatggagttgaatcagccgt
aagggtgattataaaggaaataaaagatgtatttgctgtatatggaattgcggtagaccc
tcggcacctttcacttgtggcagattacatgtgtttcgaaggattttataaaccactgaa
tcgttttggaattcagtccaactcctcccctctgcaacagatgacattcgaaaccagcta
caagttcttgaaggaagcaacaatgatgggtgcccatgatgaactgcgatccccttctgc
ttgcctcgtggttggaaaggttgtcaaaggagggactggtttgtttgacctcaagcaacc
cctgacatag
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integrated database retrieval system
