Acanthisitta chloris (rifleman): 103807990
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Entry
103807990 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 65-like
KO
K12031
tripartite motif-containing protein 65
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
achl04121
]
103807990
Ubiquitin system [BR:
achl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103807990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_6
U-box
PRY
PEP-utilisers_N
zf-4CXXC_R1
Tmemb_cc2
SHE3
zf-B_box
DUF6507
zf-RING_11
DUF677
UPF0242
ERM_helical
MRP-S27
Prefoldin_2
DUF745
DLP_helical
Motif
Other DBs
NCBI-GeneID:
103807990
NCBI-ProteinID:
XP_009078992
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MASHVSQKLEEKLVCSICLELFRVPVTLPCGHNFCKRCISDHWRKEEQAPVGAETGYTCP
ECRSFXRCPELEKNVTLYSVVELARDGEVQGWGAGRCEVVPGELCPQHGRPLELYCEDER
RSLSCSLERAPRGQTFLQESLEKAQEESERIEKAMQKLEEQTHSIKNSSEELKSGIQSKF
TYLREALEDFQYRTVARIEQEKVAALGRVAEKWSLLKERLDVLGQHREKAESLLACPNHR
TFLQEFPLLPPLESSEALVPEKCDVAAVIKPLAKILTDISRLLLEDLPGSVAPKASQPIS
QGPVHPEEPAVKVVAPVPDCQLRAELLKDHRNLTFDPESANKYLKLLKGDRKAKHSLSTV
CRQQEQGPRFEPWQVLCTQVYSSGHHYWEVEISSHSVILGVTYHGLPRQRQQGHTFNIGL
DGGSWGLQVREDCYLAWHKGQAEKIQEQLYKNLGVSLDYGKGLLSFYGLGETTQLIYSFH
DVFTEPLYPVFWLCEGQAVTLCRRN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacacgtctcgcagaagctggaggagaagctggtgtgctctatctgcctggag
ctgttcagggtgcctgttaccttaccctgcggccacaacttctgcaaacgctgcatcagc
gaccactggcgcaaagaagagcaggcgcccgtcggggcagagacaggctacacatgcccc
gagtgccgcagttttnngcggtgcccggagctggagaagaatgtcaccctgtacagcgtg
gtggagctggcacgggacggcgaggtgcagggctggggcgcagggaggtgcgaggtggtc
cccggcgagctgtgcccgcagcacgggcgcccactggagctgtactgcgaggacgagcgg
cgctccttgtcctgcagcctcgagagggctcccaggggccagacctttttgcaagagtcc
ctggagaaagcccaggaggaatcagagaggatcgagaaggcaatgcagaagctggaggaa
caaacgcacagcatcaagaactcctccgaggagctcaaatctggaattcagagcaagttc
acctacttgagggaagctctggaggatttccagtatcggacagtagccaggatcgagcaa
gagaaggtggcagcactggggcgtgtggcggagaaatggagcctcttgaaggagcgcctg
gatgtccttggccagcaccgggagaaggctgagagcctgctggcctgccccaaccacagg
accttcctccaggagttccccctgctcccacctctggagagctcagaggcgctggtcccc
gagaagtgtgatgtggctgctgtgatcaagcccttggctaagatcctcactgacatctcc
aggctcctgctggaggacctgcctggctctgtggctcccaaggcctcccaacccattagc
caaggcccagtgcatcctgaggagccagcggtgaaggtcgtggcccctgtccctgattgc
cagctccgagctgagcttctgaaggaccatcgcaacctgaccttcgatcccgagtcagcc
aacaagtacctgaagctgttgaaaggtgaccggaaagccaagcacagcctcagcactgtc
tgcaggcagcaggagcagggacctcgcttcgagccctggcaggtgctgtgcactcaggtc
tatagctctggccaccactactgggaggtggagatctccagccactctgtcatcctgggg
gtgacctaccacggtctccccaggcagcggcagcagggccacacgttcaacattgggctg
gatggaggctcctgggggctgcaggtgcgggaggattgctatctggcctggcacaagggc
caggcagagaaaatccaggagcagctgtataagaacctgggggtcagcctggattatggc
aaggggcttctctccttctatggcctcggggagacaacacagctcatctattcctttcat
gatgtcttcactgagcccctctatcctgtcttttggctgtgtgaggggcaagcggtgacg
ctgtgcaggaggaactga
DBGET
integrated database retrieval system
