KEGG   Acanthisitta chloris (rifleman): 103808261
Entry
103808261         CDS       T08456                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl03420  Nucleotide excision repair
achl04115  p53 signaling pathway
achl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:achl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103808261 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103808261 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    103808261 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:achl04121]
    103808261 (DDB2)
   03400 DNA repair and recombination proteins [BR:achl03400]
    103808261 (DDB2)
Ubiquitin system [BR:achl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103808261 (DDB2)
DNA repair and recombination proteins [BR:achl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103808261 (DDB2)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR75_1st WDR55 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 103808261
NCBI-ProteinID: XP_009079280
LinkDB
Position
Unknown
AA seq 425 aa
MTPVNQPTDKEHERAHHHWPEGTKSAGKRKPDYEELGNETQAKRLFVRKTSKPPGKIGWS
RGGSVVRNNRVLFHQLERQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGMGAGGAITGMKFNPF
NPSQLYTSSVAGTTTLQDFNGNTVRVFTSTEDWDCWYCSVDVSASCRAVATGDNVGNVVL
LSTSGEEIWKMKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMNFLYFLPH
EKPVNAAYFSPTDGAKLLTTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTPIKASWHP
RYDLIVVGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNKFNPMGDT
LASGM
NT seq 1276 nt   +upstreamnt  +downstreamnt
atgactccagtgaaccagccaacggacaaggagcacgagagggcacatcaccattggccg
gaagggacaaaatcagctgggaagaggaaaccagactatgaggaacttgggaatgagaca
caagcaaagaggttgtttgtgagaaaaacatctaaacccccagggaaaatcggttggagc
agaggtgggtctgtggtgagaaataacagagtccttttccatcagctggagcggcagtgc
agcattgttcattatgtctaccagaacatgctgggaggttccattcgggcacagctcagg
cagtgtctgcagctgccttttctgcgttctcttgcctcatatcgcctctttcgaactgca
agtccctttgacaggagagtgacgtgcctggaatggcatccaacacaccccagtacagta
gctgttggttccaaaggtggagacattatcctttgggactatgaagtacttactaaaacc
tgcttcatcaaggggatgggagctggaggggccatcacaggaatgaagtttaaccctttt
aaccctagtcagctgtacacttcgtcagttgccggcactaccaccctgcaggattttaat
ggcaatactgtccgggtcttcaccagcaccgaggactgggattgttggtactgcagtgtg
gatgtttctgcaagctgccgtgcagtggcaacaggtgataatgtgggcaacgtggtcctg
ctcagcacttctggtgaagagatttggaagatgaaattgcacaggaagaaagtgactcat
gtggagtttaactctcgatgtgagtggctgttggccacagcatctgtggatcagacagtc
aaaatctgggacctcagaaacatcaaaaacaaaatgaactttctttatttccttcctcat
gagaaacctgtcaatgcagcttacttcagcccaacagatggtgccaagctcctgaccacg
gaccagcgcagtgaaatcagagtttactcatcttcagactggaccaagccccagcatctg
attccacatccacacaggcagtttcagcacctcacacctattaaggcatcatggcatcct
cgctacgacctcattgtcgtgggtcgctacccagaccctaagttcccagggtacaccgtg
aatgagctacgaactgttgatgtgtttgatgggaacactggggagatggtttgtcagctc
catgatccaaatgcttctggtatcatctcgctcaataaatttaaccctatgggagacaca
ctggcttctggcatgg

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