Acanthisitta chloris (rifleman): 103808626
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Entry
103808626 CDS
T08456
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03440
Homologous recombination
achl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103808626 (TOP3A)
03460 Fanconi anemia pathway
103808626 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
achl03032
]
103808626 (TOP3A)
03400 DNA repair and recombination proteins [BR:
achl03400
]
103808626 (TOP3A)
Enzymes [BR:
achl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103808626 (TOP3A)
DNA replication proteins [BR:
achl03032
]
Eukaryotic type
DNA Topoisomerases
103808626 (TOP3A)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103808626 (TOP3A)
FA (Fanconi anemia) pathway
103808626 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Lar_restr_allev
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
103808626
NCBI-ProteinID:
XP_009079665
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MHLQVRLFAGRGGRMLPQPWRLFSRAAEDTALQRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKMPFRKWHSCNPLALFDAEI
EKYCPENYVDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCRAVKPNLQVFRARF
SEITLHAVRSACENLAQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPDVLADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVLFNWKRNRLFNHTACLV
LYQMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMIIAEKLYTKG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGDFAQRILDQGGPTPRHGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYL
EVYPYEKWSDKVIPLYQKGCRFQPTTVEMVDGETSPPSLLTEADLIALMEKHGIGTDATH
AEHIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKSVVLQQQVQKYKQVFIEAVARANKLDQALAQYFGAGTEITEQDEVYPAMPVSVRKC
PQCNNDMVLKTRKNGGFYLSCMGYPACKAAVWFPDFVLDVTRDESICDVCQPHPVHRLKF
KFKRGSVPPVMPLEFVGCIGGCDEMLKELLDLKYLHRPSQPTLSASQPPPHLQASNRASG
DHRHVRGTTNPPRRQLLSMNINRITRDAPPAAPDDGSNAVVCNCGSEALLLTVRKDGPNR
GRQFYKCGSNTCNFFLWADEQPEDRGTTALPQPAVGRGPAGFQRPGAGRGAEPSGSSSLD
AGGTTVCRCDQPAVTRTVQKDGPNKGRQFHTCPKPREQQCGFFQWADENVAPGPSGDVSL
NHAGSSGYSRGLGNKAKRPGSLSSGSTAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaggtgaggctgtttgccggccgcgggggcaggatgctgccgcagccctgg
cgcctcttctcccgcgctgcggaggacacagcgctccagaggatccggaaggtgctgtgt
gtggctgagaagaatgatgctgcccgagggattgctgatctgctctccaacagcaggatg
cgacggagagaaggattttccaagttcaacaagatctatgaatatgactaccagatgttt
ggccagaatgtcaccatggtgatgacatccgtgtcaggacacttactggctcatgatttt
aagatgccgtttcgcaaatggcacagctgcaaccctctagctctttttgatgctgaaatt
gagaagtattgccctgaaaattatgtggatatcaagagaacccttgaacgagaaatccag
cagtgccaagccctggtgatctggaccgactgtgatcgagaaggagagaacattggcttt
gagatcatccatgtgtgcagagctgtgaagccaaacctgcaggttttccgagcccgtttt
tcagagatcaccctccatgctgtcaggtcagcctgtgagaaccttgcccaaccagaccaa
aaaacgagcgacgctgtcgatgtcaggcaggagctggacctcaggataggtgctgccttc
accagattccagacattgaggctgcagaaaatcttccctgatgttttagcagatcaactg
atcagctatgggagctgccagttcccaacattgggatttgtagttgaacgctttaaagcc
atccaggcctttgttcctgaagccttctacaaaattaaagtgacccatgaccatgaagat
ggcagtgtgctcttcaactggaagaggaaccgactcttcaatcacacagcatgcctggtt
ctttaccaaatgtgtatggaggatccggtagcaactgttgttgaggttgggagcaagcca
aagagcaaatggaggcccctgcccctggacactgtggagctcgagaaattggcttcacgc
aagctgaaaataaacgcaaaggaaaccatgataatagcagaaaaactctatactaaaggg
ttcattagctacccccgaactgagaccaacattttccccaaggagttgaacctctcggcc
ttggtacaacagcaaacacaggacccaaactggggagactttgcacagaggattttggat
cagggtgggccaactcctcggcatggaaccaaatctgatcaggctcaccctcccatccac
cccacaaaatacactgctaacctgcagggcaatgagcagagactctatgaattcatcgtg
cgccattttttggcttgttgctctcaagatgccaaaggacaggaaacaactgtggaaatt
gacattgccaatgagagattcattgctcaaggactaatgatcctggcccgaaactacctg
gaagtttatccttacgagaagtggagtgataaggttatcccactgtaccagaaagggtgt
cgcttccagcccaccacggtggagatggtggatggggaaaccagccctccctcgctcctc
acagaagcagatctcattgctctcatggagaaacatggcattgggactgatgccacccac
gctgagcacattgagaccatcaagacacggatgtacgtgggcctgacagcggatcagcgc
ttcctgcctggacacctgggcatggggctggtggaaggctatgattctatgggctacgag
atgtccaagcctgaccttcgagctgagctggaggctgatctaaaactgatctgtgaaggg
aagaaagacaaatctgtagtgttgcagcagcaggtccaaaagtacaagcaagtcttcatt
gaagctgtggccagagccaacaagttggaccaggccctggctcagtattttggagcaggc
acagaaattacagagcaggatgaggtgtacccagcaatgcctgtttctgttcggaagtgt
ccacagtgcaataatgacatggtgctgaagaccaggaagaatggggggttctacctcagc
tgcatgggctatccagcctgtaaagctgcagtctggttccctgatttcgtgctggatgtg
accagggatgagagcatctgtgatgtgtgtcaaccccatccagttcacagactgaagttt
aaattcaagagaggcagcgttccacctgtgatgcccctggagttcgttggctgcattgga
ggctgcgatgagatgctaaaagagctcttggaccttaagtacctacacagaccatcccaa
cccacattgtcagccagccagccaccacctcacctgcaggcctctaacagagccagtggt
gaccacaggcacgtgaggggcaccacaaatcctccacgaagacagctgctttccatgaac
atcaacagaataaccagggatgctcctccggccgctccggacgatgggagcaacgcggtg
gtgtgtaactgcgggagcgaagctctgctgctcaccgtgcgcaaggatgggcccaaccgc
gggcggcagttctacaagtgtggctccaatacctgcaacttcttcctctgggctgatgag
cagccagaggacagaggcaccacagcactgccccagcctgctgtgggaaggggcccagcg
ggattccagcgcccaggagcagggagaggcgcagagccctctggaagcagcagcttggat
gctggaggcaccacagtgtgcaggtgtgaccaaccagctgtcacacgcaccgtgcagaag
gatggacccaacaaggggaggcagttccacacctgccccaagcctcgggagcagcaatgt
ggcttctttcagtgggcagatgagaacgtggcaccaggcccttctggagatgtctctctg
aaccacgctggcagcagtggctactcaagagggttgggaaataaagccaagagaccaggc
agtctctcttcgggatccactgccaagaaaccacggacttgcagcatttgccaccagcct
gggcacacaagaaaaacctgccctcagaaccactga
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