Acanthisitta chloris (rifleman): 103808984
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Entry
103808984 CDS
T08456
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl04136
Autophagy - other
achl04140
Autophagy - animal
achl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103808984 (ATG16L1)
04136 Autophagy - other
103808984 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103808984 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
achl04131
]
103808984 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
achl03029
]
103808984 (ATG16L1)
Membrane trafficking [BR:
achl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103808984 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
103808984 (ATG16L1)
Mitochondrial biogenesis [BR:
achl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103808984 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
eIF2A
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_HPS5
Ge1_WD40
Beta-prop_WDR19_1st
CCDC93_CC
Beta-prop_Vps41
INO80F
Fez1
WD40_like
PKcGMP_CC
DUF7310
Lipoprotein_6
HTH_6
AP5B1_middle
HEF_HK
PUMA_CC
FUSC
V_ATPase_I
WH_CYT4
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
103808984
NCBI-ProteinID:
XP_009080041
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEARIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDDIE
VLVDETSETADETSPVRAVSRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQPSDAARR
RSLSSFPAPQDNIEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRR
VKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLT
GHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSG
HFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQT
FSAQGFKCGSDWTRVVFSPDGSYVAAGSADGALYIWSVLTGKLERTLAKHHSSSINAVAW
SPAGAHVVSVDKGNKAVLWSEF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaggcatgagatcagtccaggacatgatggcacatggaatgatgctcagctg
caggaactggcacagctgaagataaagcatcaagaggagctgacagagctgcacaagaaa
cgtggcgagctggcccagtctgtaattgatctgaacaaccaaatgcagcagaaggacaaa
gagatgcagatgaacgaagccaggattgcagagtatttacaaaagatttctgaactggaa
acagagtgccaggaattgcgcagcaaactgcaagatcttgagcgagctaatcagacactg
aaggatgagtatgatgctctccaaatcaccttcaatgccttggaggagaaactgaggaaa
actactgaggataatcaggagctggtgtcacgctggatggcagagaaagcacaagaagcc
aatcgtttgaatgcagaaaatgaaaaggattcaaggagacgccaagctaggctgcagaag
gagctggcagaagctgccaaagagcccctgcctgttgaacccagggatgatgatatcgaa
gtgcttgtggatgaaacctctgagacagctgacgaaacgtccccagtgcgagctgtcagc
agaacgtccagtaagcgactctcccagccagctggaggccttctggactctatcactaat
atctttggtctgtctgagtctccccttttgggacatcagccttctgatgctgccaggagg
cgttctctgtcctcgttccctgctccccaggataatatagagccacatccaggtgctagt
aaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggggaggtg
aatgcggtgcagttcagccctggctcccggttactagcaacaggaggcatggaccgaagg
gttaagctttgggaagtcttgggagataggtgtgagcccaaaggttccctctctggtagt
aatgctgggattacaagcatagaatttgatagtgctggttcttacctcttagcagcttca
aatgactttgccagcagaatctggacggttgatgacaatcgattacggcacaccctgaca
ggtcacagcggtaaagttctgtcagccaagttcctgctggacaatgcgcgcattgtctct
ggaagccacgacaggaccctcaagctctgggacctccgcagcaaagtctgtataaaaaca
gtgtttgcaggatctagctgcaatgacatcgtgtgtactgagcagtgtgtaatgagtgga
cattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaagagctg
gagctgcttggcagaatcacagctctggacctgaactcggagcgaacagagctgttgacc
tgttcccgtgacgatctactcaagataattgatctgcgggttagtgctgtcaagcagaca
ttcagtgcccagggattcaaatgtggctctgactggacgagagttgtgttcagccctgat
ggtagctatgtggctgctggttcagctgatggggccctctacatttggagcgtgctcact
gggaaattggagaggacactagcaaagcatcacagttcttctatcaatgcagttgcatgg
tcgccagcaggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctgtggtct
gaattttga
DBGET
integrated database retrieval system
